Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia09472 Lachesis_group15 + View
Arabidopsis lyrata AL3G40780 scaffold_3 + View
Avicennia marina MSTRG.20966 ScioBoG_26769_HRSCAF_26899 + View
Avicennia marina MSTRG.17997 ScioBoG_19834_HRSCAF_19925 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TEYT15 PTHR33159//PTHR33159:SF6 - FAMILY NOT NAMED // RPM1-INTERACTING PROTEIN 4 arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT3G25070 RPM1 interacting protein 4 Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens%2C which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB%2C AvrRpm1%2C and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage%2C called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs%2C one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto. RPM1 interacting protein 4 (RIN4)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: in 6 processes%3B LOCATED IN: plasma membrane%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4%2C defence response (InterPro:IPR008700)%3B BEST Arabidopsis thaliana protein match is: defense protein-related (TAIR:AT5G48657.2)%3B Has 373 Blast hits to 371 proteins in 56 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 13%3B Fungi - 2%3B Plants - 331%3B Viruses - 0%3B Other Eukaryotes - 19 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC06g35778 ChrC06 + View
Brassica carinata BcaB08g34432 ChrB08 + View
Brassica carinata BcaB06g26730 ChrB06 - View
Coffea canephora Cc01_g16790 Putative RPM1-interacting protein 4 chr1 - View
Citrus clementina Ciclev10021726m.g scaffold_3 - View
Cardamine hirsuta CARHR101410 RPM1 interacting protein 4 Chr3 + View
Citrullus lanatus ClCG09G008810 RPM1-interacting protein 4 CG_Chr09 - View
Carica papaya Cpa.g.sc8.126 supercontig_8 - View
Capsella rubella Carub.0003s2542 K13456 - RPM1-interacting protein 4 (RIN4) scaffold_3 + View
Davidia involucrata Dinv12658 GWHABJS00000007 + View
Durio zibethinus Duzib133G1090 NW_019167938.1 + View
Durio zibethinus Duzib211G0360 NW_019168049.1 + View
Durio zibethinus Duzib138G0625 NW_019167893.1 + View
Eucalyptus grandis Eucgr.K02142 Chr11 - View
Eucalyptus grandis Eucgr.H00779 Chr08 - View
Erythranthe guttata Migut.N00628 scaffold_14 + View
Erythranthe guttata Migut.D02499 scaffold_4 + View
Eutrema salsugineum Thhalv10002991m.g K13456 - RPM1-interacting protein 4 (RIN4) scaffold_4 - View
Fragaria x ananassa FAN15G3260 K13456 - RPM1-interacting protein 4 (RIN4) Fvb2-4 - View
Fragaria x ananassa FAN27G2350 K13456 - RPM1-interacting protein 4 (RIN4) Fvb2-1 - View
Fragaria x ananassa FAN24G2024 K13456 - RPM1-interacting protein 4 (RIN4) Fvb2-2 + View
Fragaria vesca FvH4_2g18650 PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Fvb2 - View
Glycine max Glyma.08G349500 K13456 - RPM1-interacting protein 4 (RIN4) Gm08 - View
Lupinus albus Lalb_Chr03g0041531 PTHR33159//PTHR33159:SF6 - FAMILY NOT NAMED // RPM1-INTERACTING PROTEIN 4 Lalb_Chr03 - View
Lotus japonicus Lj3g0021651 PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 chr3 - View
Lonicera japonica Lj2A1127T51 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_9_15261 Lsat_1_v8_lg_9 + View
Malus domestica MD10G1160600 RPM1 interacting protein 4 Chr10 - View
Manihot esculenta Manes.12G046800 Chromosome12 + View
Medicago truncatula Medtr8g012960 RPM1 interacting protein 4 transcript protein chr8 - View
Punica granatum PGR044G0352 NC_045134.1 + View
Punica granatum PGR083G2795 NC_045133.1 - View
Populus trichocarpa Potri.002G245400 PTHR33159//PTHR33159:SF6 - FAMILY NOT NAMED // RPM1-INTERACTING PROTEIN 4 Chr02 + View
Phaseolus vulgaris Phvul.010G021200 K13456 - RPM1-interacting protein 4 (RIN4) Chr10 + View
Rosa chinensis RcHm_v2.0_Chr6g0284211 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim13G0047200 chr13 + View
Rhododendron simsii Rhsim01G0254100 chr01 - View
Salix brachista Sabra02G0186700 GWHAAZH00000002 + View
Simmondsia chinensis Sc17g0002180 GWHAASQ00000017 - View
Sechium edule Sed0008860 LG07 + View
Schrenkiella parvula Sp3g22670 K13456 - RPM1-interacting protein 4 (RIN4) ch3-2 + View
Trochodendron aralioides TAR362G1062 group17 + View
Tripterygium wilfordii TWI36G0241 NC_052237.1 - View
Tripterygium wilfordii TWI18G0470 NC_052241.1 + View
Vaccinium macrocarpon vmacro02779 Similar to RIN4: RPM1-interacting protein 4 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0545 CM024070.1 + View