Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold94G28436 scaffold94 + View
SGA_v2.0_scaffold105G30479 scaffold105 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G12630 LG-10 - View
Aethionema arabicum Aa31LG1G24070 LG-1 - View
Acer truncatum Atru.chr8.1065 chr8 - View
Actinidia chinensis Actinidia38575 Lachesis_group8 - View
Actinidia chinensis Actinidia20305 Lachesis_group18 - View
Actinidia chinensis Actinidia09384 Lachesis_group5 - View
Arabidopsis lyrata AL5G39570 scaffold_5 - View
Arabidopsis lyrata AL4G40560 scaffold_4 + View
Avicennia marina MSTRG.6468 ScioBoG_102839_HRSCAF_103093 - View
Avicennia marina MSTRG.19896 ScioBoG_25048_HRSCAF_25167 - View
Amaranthus hybridus Ah.13g076000 Squamosa promoter-binding-like protein 17 AmaHy_arrow1_Scaffold_13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1D9JMR PF03110 - SBP domain (SBP) arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.78DCKG PF03110 - SBP domain (SBP) arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT2G42200 squamosa promoter binding protein-like 9 Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem. squamosa promoter binding protein-like 9 (SPL9)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: vegetative to reproductive phase transition of meristem%2C regulation of leaf formation%2C leaf development%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C SBP-box (InterPro:IPR004333)%3B BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 15 (TAIR:AT3G57920.1)%3B Has 3664 Blast hits to 3108 proteins in 157 species: Archae - 2%3B Bacteria - 85%3B Metazoa - 116%3B Fungi - 125%3B Plants - 880%3B Viruses - 2%3B Other Eukaryotes - 2454 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB02g08289 ChrB02 + View
Brassica carinata BcaB02g07566 ChrB02 + View
Brassica carinata BcaNung04403 Contig1551 - View
Brassica carinata BcaC08g44878 ChrC08 - View
Brassica carinata BcaC02g12468 ChrC02 + View
Brassica napus C04p03360 C04 + View
Brassica napus A05p02770 A05 + View
Brassica napus A04p02850 A04 + View
Brassica napus A07p23730 A07 - View
Brassica oleracea BolC4t21973H C4 + View
Brassica rapa BraA07t30026Z A07 - View
Brassica rapa BraA05t19269Z A05 + View
Brassica rapa BraA04t16009Z A04 + View
Beta vulgaris EL10Ac3g06940 PF03110 - SBP domain (SBP) Chr3_EL10_PGA_scaffold7 + View
Camellia sinensis var. sinensis CSS0027907 promoter-binding protein SPL9 [Vitis vinifera] Chr10 - View
Capsicum annuum CAN.G1161.22 PGAv.1.6.scaffold1161 - View
Cicer arietinum L. Ca_08508_v3 Ca_LG3_v3 - View
Corylus avellana Haze_19966 Similar to SPL9: Squamosa promoter-binding-like protein 9 (Arabidopsis thaliana OX%3D3702) 10 - View
Citrus clementina Ciclev10011938m.g scaffold_6 - View
Carpinus fangiana Cfa016903 Cfa07 - View
Cardamine hirsuta CARHR137240 squamosa promoter binding protein-like 9 Chr4 + View
Cardamine hirsuta CARHR168220 squamosa promoter binding protein-like 15 Chr5 - View
Carya illinoinensis CiPaw.09G031800 PF03110 - SBP domain (SBP) Chr09 + View
Carya illinoinensis CiPaw.10G027700 PF03110 - SBP domain (SBP) Chr10 + View
Citrullus lanatus ClCG10G017410 SQUAMOSA promoter binding protein-like protein CG_Chr10 - View
Cucumis melo MELO3C009639.2 Squamosa promoter binding protein chr04 - View
Chenopodium quinoa AUR62012061 SPL17: Squamosa promoter-binding-like protein 17 C_Quinoa_Scaffold_2008 + View
Capsella rubella Carub.0005s2476 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED scaffold_5 - View
Capsella rubella Carub.0004s2454 PF03110 - SBP domain (SBP) scaffold_4 + View
Cucumis sativus L. CsaV3_3G038950 Squamosa promoter binding protein chr3 + View
Daucus carota DCAR_017026 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_019839 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv14278 GWHABJS00000015 + View
Durio zibethinus Duzib128G1293 NW_019168481.1 - View
Durio zibethinus Duzib093G0396 NW_019167937.1 - View
Durio zibethinus Duzib106G1808 NW_019168492.1 - View
Eucalyptus grandis Eucgr.K01828 Chr11 - View
Eucalyptus grandis Eucgr.A02441 Chr01 - View
Erythranthe guttata Migut.J01823 scaffold_10 - View
Erythranthe guttata Migut.K00051 scaffold_11 + View
Eutrema salsugineum Thhalv10006058m.g PF03110 - SBP domain (SBP) scaffold_19 + View
Fragaria x ananassa FAN02G1054 PF03110 - SBP domain (SBP) Fvb6-4 + View
Fragaria x ananassa FAN05G1685 PF03110 - SBP domain (SBP) Fvb6-3 - View
Fragaria vesca FvH4_6g22640 PF03110 - SBP domain (SBP) Fvb6 + View
Glycine max Glyma.03G143100 PF03110 - SBP domain (SBP) Gm03 - View
Glycine max Glyma.19G146000 PF03110 - SBP domain (SBP) Gm19 - View
Glycine max Glyma.02G177500 PF03110 - SBP domain (SBP) Gm02 - View
Gossypium raimondii Gorai.007G362000 Chr07 - View
Lotus japonicus Lj5g0001353 PF03110 - SBP domain (SBP) chr5 - View
Lonicera japonica Lju124A29T44 GWHAAZE00000021 + View
Lonicera japonica Lj2A371G27 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_9_28021 PF03110 - SBP domain (SBP) Lsat_1_v8_lg_9 + View
Manihot esculenta Manes.08G045150 Chromosome08 - View
Manihot esculenta Manes.09G032800 Chromosome09 - View
Medicago truncatula Medtr7g092930 squamosa promoter-binding-like protein chr7 - View
Nicotiana tabacum Nitab4.5_0000991g0020 Transcription factor, SBP-box Nitab4.5_0000991 + View
Olea europaea Oeu033744.1 chr17 - View
Petunia axillaris Peaxi162Scf00258g00128 squamosa promoter binding protein-like 9 Peaxi162Scf00258 - View
Petunia axillaris Peaxi162Scf00003g04342 squamosa promoter binding protein-like 15 Peaxi162Scf00003 - View
Punica granatum PGR004G1583 NC_045131.1 - View
Prunus persica Prupe.7G074200 PF03110 - SBP domain (SBP) Pp07 - View
Pisum sativum Psat3g069560 SBP domain chr3LG5 + View
Papaver somniferum PSO339G3732 NC_039366.1 + View
Papaver somniferum PSO384G4992 NC_039368.1 - View
Populus trichocarpa Potri.016G048500 PF03110 - SBP domain (SBP) Chr16 + View
Phaseolus vulgaris Phvul.007G258400 Chr07 - View
Phaseolus vulgaris Phvul.001G141000 PF03110 - SBP domain (SBP) Chr01 - View
Quercus lobata QL07p023193 7 - View
Rhododendron simsii Rhsim04G0097700 chr04 + View
Rhododendron simsii Rhsim03G0008900 chr03 + View
Salvia bowleyana SalBow6G4894 GWHASIU00000002 - View
Salix brachista Sabra16G0052200 GWHAAZH00000016 + View
Simmondsia chinensis Sc13g0002160 GWHAASQ00000013 - View
Simmondsia chinensis Sc19g0006970 GWHAASQ00000019 - View
Sechium edule Sed0003293 LG02 - View
Sechium edule Sed0004511 LG12 + View
Solanum lycopersicum Solyc10g078700.3 Squamosa promoter binding protein 15 SL4.0ch10 - View
Schrenkiella parvula Sp5g04800 PF03110 - SBP domain (SBP) ch5-1 + View
Solanum pennellii Sopen10g029320 Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. | squamosa promoter binding protein-like 15 (SPL15) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of cell size, regulation of cell proliferation, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box | BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 9 Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400011433 Promoter-binding protein SPL9 ST4.03ch10 + View
Selenicereus undatus Hund19194 Scaffold_33673 - View
Trochodendron aralioides TAR369G0570 group18 - View
Trochodendron aralioides TAR623G1613 group7 + View
Trochodendron aralioides TAR633G0482 group2 + View
Theobroma cacao Thecc.05G168900 Promoter-binding protein SPL9 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104802470 squamosa promoter-binding-like protein 9 NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104824467 squamosa promoter-binding-like protein 9 NW_010966881.1 - View
Vaccinium macrocarpon vmacro09109 Similar to SPL15: Squamosa promoter-binding-like protein 15 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro07933 Similar to SPL9: Squamosa promoter-binding-like protein 9 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0135 CM024070.1 - View
Vigna mungo VMungo0720G2907 CM024071.1 + View
Vitis vinifera GSVIVG01033519001 chr8 - View