Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold4G02008 scaffold4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia32732 Lachesis_group27 + View
Actinidia chinensis Actinidia21678 Lachesis_group1 - View
Actinidia chinensis Actinidia24742 Lachesis_group9 - View
Arabidopsis thaliana AT1G52240 rop guanine nucleotide exchange factor-like protein Encodes a member of KPP-like gene family%2C homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family%2C containing the novel PRONE domain (plant-specific Rop nucleotide exchanger)%2C which is exclusively active towards members of the Rop subfamily . RHO guanyl-nucleotide exchange factor 11 (ROPGEF11)%3B CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger%2C PRONE (InterPro:IPR005512)%2C Dynein light chain%2C type 1/2 (InterPro:IPR001372)%3B BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 13 (TAIR:AT3G16130.1)%3B Has 1099 Blast hits to 1098 proteins in 168 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 490%3B Fungi - 40%3B Plants - 487%3B Viruses - 0%3B Other Eukaryotes - 82 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g43380 ChrC08 - View
Brassica napus A05p33370 A05 - View
Brassica napus C06p07470 C06 - View
Brassica oleracea BolC6t35836H C6 - View
Brassica rapa BraA01t03857Z A01 - View
Brassica rapa BraA05t22162Z A05 - View
Camellia sinensis var. sinensis CSS0011598 PREDICTED: rop guanine nucleotide exchange factor 12-like isoform X1 [Nicotiana tomentosiformis] Chr15 - View
Cicer arietinum L. Ca_20373_v3 Ca_LG6_v3 - View
Cicer arietinum L. Ca_01129_v3 Ca_LG1_v3 + View
Corylus avellana Haze_16365 Similar to ROPGEF12: Rop guanine nucleotide exchange factor 12 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc04_g03060 Rho guanine nucleotide exchange factor 8 chr4 - View
Citrus clementina Ciclev10027341m.g scaffold_7 - View
Ceratophyllum demersum CDE02G1915 1 + View
Carpinus fangiana Cfa002092 Cfa01 + View
Cardamine hirsuta CARHR042370 RHO guanyl-nucleotide exchange factor 11 Chr1 - View
Carya illinoinensis CiPaw.01G236000 PTHR33101//PTHR33101:SF10//PTHR33101:SF11 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED // SUBFAMILY NOT NAMED Chr01 - View
Carya illinoinensis CiPaw.02G149000 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Chr02 - View
Citrullus lanatus ClCG07G013140 Rop guanine nucleotide exchange factor 1 CG_Chr07 + View
Citrullus lanatus ClCG09G001960 Rop guanine nucleotide exchange factor CG_Chr09 - View
Cucumis melo MELO3C024254.2 Rop guanine nucleotide exchange factor chr01 + View
Cucumis melo MELO3C012970.2 Rop guanine nucleotide exchange factor chr04 + View
Capsella rubella Carub.0001s4121 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_7G033400 Rop guanine nucleotide exchange factor like chr7 + View
Cucumis sativus L. CsaV3_3G025010 Rop guanine nucleotide exchange factor like chr3 - View
Daucus carota DCAR_007569 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_023060 hypothetical protein DCARv2_Chr6 - View
Durio zibethinus Duzib235G1198 NW_019167982.1 + View
Durio zibethinus Duzib160G0885 NW_019168015.1 + View
Erigeron canadensis ECA247G0070 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA234G0507 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.F03037 Chr06 + View
Eucalyptus grandis Eucgr.J02959 Chr10 - View
Erythranthe guttata Migut.D01018 scaffold_4 - View
Erythranthe guttata Migut.I00943 scaffold_9 - View
Eutrema salsugineum Thhalv10018421m.g scaffold_9 + View
Eutrema salsugineum Thhalv10011349m.g PF01221//PF03759 - Dynein light chain type 1 (Dynein_light) // PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) scaffold_7 + View
Gossypium hirsutum Gohir.D05G131100 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED D05 + View
Gossypium hirsutum Gohir.A02G120800 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED A02 - View
Gossypium hirsutum Gohir.A05G131600 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED A05 + View
Gossypium hirsutum Gohir.D10G070200 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED D10 - View
Glycine max Glyma.07G019800 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Gm07 - View
Glycine max Glyma.15G016200 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Gm15 + View
Gossypium raimondii Gorai.011G074500 Chr11 - View
Gossypium raimondii Gorai.009G134800 Chr09 + View
Lupinus albus Lalb_Chr04g0262791 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Lalb_Chr04 + View
Lupinus albus Lalb_Chr22g0351361 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Lalb_Chr22 + View
Lupinus albus Lalb_Chr14g0373241 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Lalb_Chr14 - View
Lupinus albus Lalb_Chr24g0395921 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Lalb_Chr24 + View
Lupinus albus Lalb_Chr25g0279961 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Lalb_Chr25 + View
Lotus japonicus Lj3g0009785 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) chr3 - View
Lotus japonicus Lj3g0003496 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) chr3 - View
Lonicera japonica Lj9A509T92 GWHAAZE00000009 - View
Lonicera japonica Lj5C58T15 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_130880 PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Lsat_1_v8_lg_5 + View
Malus domestica MD17G1191500 RHO guanyl-nucleotide exchange factor 12 Chr17 - View
Manihot esculenta Manes.04G129800 Chromosome04 + View
Medicago truncatula Medtr2g101830 RHO guanyl-nucleotide exchange factor chr2 - View
Petunia axillaris Peaxi162Scf00207g00931 ROP guanine nucleotide exchange factor 5 Peaxi162Scf00207 + View
Punica granatum PGR102G1340 NC_045129.1 + View
Punica granatum PGR102G2950 NC_045129.1 + View
Prunus persica Prupe.3G067500 PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Pp03 - View
Populus trichocarpa Potri.003G052600 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Chr03 - View
Phaseolus vulgaris Phvul.005G168700 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Chr05 + View
Rhododendron simsii Rhsim08G0223200 chr08 + View
Salix brachista Sabra01G0155500 GWHAAZH00000001 - View
Simmondsia chinensis Sc12g0009450 GWHAASQ00000012 + View
Sechium edule Sed0016061 LG07 - View
Sechium edule Sed0019622 LG05 + View
Sechium edule Sed0027333 LG06 + View
Sechium edule Sed0027792 LG09 - View
Solanum lycopersicum Solyc12g044270.2 Rop guanine nucleotide exchange factor 9 (AHRD V3.3 *** A0A2G3BHY6_CAPCH) SL4.0ch12 + View
Solanum lycopersicum Solyc03g120650.4 GDP-mannose pyrophosphorylase SL4.0ch03 - View
Schrenkiella parvula Sp1g38780 PF01221//PF03759 - Dynein light chain type 1 (Dynein_light) // PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) ch1-2 - View
Solanum pennellii Sopen12g022510 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth. | RHO guanyl-nucleotide exchange factor 12 (ROPGEF12) | CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE | BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400016533 Pollen-specific kinase partner protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400046768 Pollen-specific kinase partner protein ST4.03ch12 + View
Selenicereus undatus Hund00642 Scaffold_33678 + View
Selenicereus undatus Hund06630 Scaffold_33676 + View
Trifolium pratense TPR.G37253 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI12G0211 NC_052243.1 + View
Vaccinium macrocarpon vmacro18889 Similar to ROPGEF12: Rop guanine nucleotide exchange factor 12 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0535 CM024079.1 + View
Vigna mungo VMungo0331G0984 CM024078.1 + View