Gene: Solyc12g044270.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g044270.2
- Transcript Identifier Solyc12g044270.2.1
- Gene Type Coding gene
- Location SL4.0ch12 : 58807764-58810278 : positive
Gene Family Information
- ID HOM05D000346
- #Genes/#Species 1367/97
- Phylogenetic origin
- ID ORTHO05D000326
- #Genes/#Species 1104/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g044270.2.1
- uniprot A0A3Q7J959
- gene_id Solyc12g044270
Descriptions
- Description Rop guanine nucleotide exchange factor 9 (AHRD V3.3 *** A0A2G3BHY6_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT1G52240 |
| GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | AT1G79860 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G79860 |
| GO:0080147 | ISO | PLAZA Integrative Orthology | root hair cell development | AT1G52240 |
| GO:0080092 | ISO | PLAZA Integrative Orthology | regulation of pollen tube growth | AT1G79860 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005085 | IEA | GOA Database | guanyl-nucleotide exchange factor activity | |
| GO:0005085 | IEA | InterPro | guanyl-nucleotide exchange factor activity | |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT3G24620 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G24620 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G52240 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G52240 |
| GO:0016324 | ISO | PLAZA Integrative Orthology | apical plasma membrane | AT5G19560 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G79860 |
| GO:0090406 | ISO | PLAZA Integrative Orthology | pollen tube | AT1G79860 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.4.3.1 | Multi-process regulation.Rop-GTPase regulatory system.RopGEF guanine nucleotide exchange factor activities.exchange factor (PRONE) |