Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold138G35223 scaffold138 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G9830 LG-8 + View
Acer truncatum Atru.chr5.1710 chr5 + View
Acer truncatum Atru.chr4.2049 chr4 - View
Actinidia chinensis Actinidia40050 Lachesis_group22 - View
Actinidia chinensis Actinidia04443 Lachesis_group3 + View
Arabidopsis lyrata AL3G37940 scaffold_3 + View
Avicennia marina MSTRG.4141 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.24676 ScioBoG_4088_HRSCAF_4107 - View
Avicennia marina MSTRG.9886 ScioBoG_12795_HRSCAF_12848 - View
Avicennia marina MSTRG.18326 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.21490 ScioBoG_26769_HRSCAF_26899 - View
Amaranthus hybridus Ah.04g155700 AmaHy_arrow1_Scaffold_4 - View
Aquilegia oxysepala Aqoxy2G03660 CHR02 + View
Aquilegia oxysepala Aqoxy5G00218 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0BJ33Y PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3YCL0F PF04852 - Protein of unknown function (DUF640) (DUF640) arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT3G23290 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT2G31160.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB04g20455 ChrB04 - View
Brassica carinata BcaC09g49283 ChrC09 + View
Brassica carinata BcaB06g26476 ChrB06 + View
Brassica napus C01p40570 C01 - View
Brassica napus C07p14170 C07 - View
Brassica oleracea BolC1t04009H C1 - View
Brassica rapa BraA05t20362Z A05 + View
Beta vulgaris EL10Ac3g04996 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr3_EL10_PGA_scaffold7 - View
Camellia sinensis var. sinensis CSS0007799 BnaCnng65050D [Brassica napus] Chr9 - View
Camellia sinensis var. sinensis CSS0009636 hypothetical protein POPTR_0005s24730g [Populus trichocarpa] Chr13 - View
Camellia sinensis var. sinensis CSS0049820 BnaCnng65050D [Brassica napus] Chr5 - View
Cannabis sativa CANSAT01G2841 NC_044373.1 - View
Cannabis sativa CANSAT78G0855 NC_044376.1 - View
Cicer arietinum L. Ca_09676_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_08680_v3 Ca_LG3_v3 + View
Corylus avellana Haze_11391 Similar to LSH6: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (Arabidopsis thaliana OX%3D3702) 9 + View
Corylus avellana Haze_24644 Similar to LSH3: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc02_g08880 Protein of unknown function (DUF640) chr2 + View
Coffea canephora Cc03_g05620 Protein of unknown function (DUF640) chr3 + View
Coffea canephora Cc01_g18240 Protein of unknown function (DUF640) chr1 - View
Citrus clementina Ciclev10022288m.g scaffold_3 - View
Citrus clementina Ciclev10022295m.g scaffold_3 - View
Citrus clementina Ciclev10005901m.g scaffold_9 + View
Carpinus fangiana Cfa002438 Cfa01 + View
Carpinus fangiana Cfa006345 Cfa02 + View
Carya illinoinensis CiPaw.02G111400 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr02 - View
Carya illinoinensis CiPaw.01G183600 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr01 - View
Carya illinoinensis CiPaw.04G187300 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr04 + View
Carya illinoinensis CiPaw.03G265500 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr03 + View
Citrullus lanatus ClCG07G001100 Protein of unknown function (DUF640) LENGTH=219 CG_Chr07 + View
Cucumis melo MELO3C012877.2 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 chr04 - View
Cucumis melo MELO3C006417.2 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 chr06 - View
Chenopodium quinoa AUR62002145 LSH6: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 C_Quinoa_Scaffold_4480 + View
Chenopodium quinoa AUR62015561 LSH6: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 C_Quinoa_Scaffold_2751 - View
Cucumis sativus L. CsaV3_3G022180 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS like chr3 - View
Cucumis sativus L. CsaV3_3G012030 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS like chr3 - View
Daucus carota DCAR_030747 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_027321 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_002318 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv34635 GWHABJS00000010 - View
Davidia involucrata Dinv29851 GWHABJS00000016 - View
Durio zibethinus Duzib212G0778 NW_019168026.1 - View
Durio zibethinus Duzib133G1470 NW_019167938.1 + View
Durio zibethinus Duzib151G1095 NW_019167904.1 + View
Durio zibethinus Duzib211G0016 NW_019168049.1 + View
Durio zibethinus Duzib052G0648 NW_019167849.1 + View
Durio zibethinus Duzib138G0192 NW_019167893.1 + View
Erigeron canadensis ECA240G0198 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA247G2065 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA248G0980 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA236G4273 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.H03039 Chr08 - View
Eucalyptus grandis Eucgr.H00151 Chr08 - View
Erythranthe guttata Migut.D00435 scaffold_4 + View
Erythranthe guttata Migut.N00276 scaffold_14 + View
Eutrema salsugineum Thhalv10021563m.g PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED scaffold_13 - View
Fragaria x ananassa FAN20G2156 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Fvb2-3 + View
Fragaria x ananassa FAN22G1049 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Fvb4-1 + View
Fragaria x ananassa FAN12G3691 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb4-3 - View
Fragaria vesca FvH4_4g03750 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb4 + View
Gossypium hirsutum Gohir.A07G149300 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED A07 + View
Gossypium hirsutum Gohir.A09G229600 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED A09 - View
Gossypium hirsutum Gohir.D07G155400 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D07 + View
Gossypium hirsutum Gohir.D10G156500 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D10 + View
Gossypium hirsutum Gohir.A10G111400 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED A10 - View
Gossypium hirsutum Gohir.A07G213600 PF04852 - Protein of unknown function (DUF640) (DUF640) A07 + View
Gossypium hirsutum Gohir.D07G219800 PF04852 - Protein of unknown function (DUF640) (DUF640) D07 + View
Gossypium hirsutum Gohir.D09G230600 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D09 - View
Gossypium hirsutum Gohir.D02G045700 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D02 + View
Gossypium hirsutum Gohir.D11G137200 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED D11 + View
Gossypium hirsutum Gohir.A02G039501 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED A02 + View
Glycine max Glyma.19G165300 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm19 + View
Glycine max Glyma.03G164000 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm03 + View
Gossypium raimondii Gorai.001G254200 Chr01 + View
Gossypium raimondii Gorai.007G147000 Chr07 + View
Gossypium raimondii Gorai.001G178100 Chr01 + View
Gossypium raimondii Gorai.005G050400 Chr05 + View
Gossypium raimondii Gorai.011G174900 Chr11 + View
Gossypium raimondii Gorai.006G253300 Chr06 - View
Helianthus annuus HanXRQChr15g0467771 Putative ALOG domain HanXRQChr15 - View
Helianthus annuus HanXRQChr03g0091471 Protein of unknown function (DUF640) HanXRQChr03 + View
Hydrangea macrophylla Hma1.2p1_0992F.1_g245240 Hma1.2p1_0992F.1 + View
Lupinus albus Lalb_Chr21g0313901 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Lalb_Chr21 + View
Lupinus albus Lalb_Chr02g0152501 PF04852 - Protein of unknown function (DUF640) (DUF640) Lalb_Chr02 + View
Lupinus albus Lalb_Chr03g0037231 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Lalb_Chr03 + View
Lotus japonicus Lj6g0023037 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED chr6 - View
Lotus japonicus Lj1g0007761 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED chr1 - View
Lotus japonicus Lj5g0018392 PF04852 - Protein of unknown function (DUF640) (DUF640) chr5 - View
Lonicera japonica Lj2P1149T6 GWHAAZE00000002 - View
Lonicera japonica Lj2C41T7 GWHAAZE00000002 + View
Lonicera japonica Lj6P635T33 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_8_92641 PF04852 - Protein of unknown function (DUF640) (DUF640) Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_5_183581 PF04852 - Protein of unknown function (DUF640) (DUF640) Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_9_8221 PF04852 - Protein of unknown function (DUF640) (DUF640) Lsat_1_v8_lg_9 + View
Malus domestica MD10G1183100 Protein of unknown function (DUF640) Chr10 - View
Malus domestica MD05G1195700 Protein of unknown function (DUF640) Chr05 - View
Malus domestica MD13G1214900 Protein of unknown function (DUF640) Chr13 + View
Malus domestica MD16G1220100 Protein of unknown function (DUF640) Chr16 + View
Manihot esculenta Manes.13G035100 Chromosome13 + View
Manihot esculenta Manes.12G033200 Chromosome12 + View
Manihot esculenta Manes.15G041500 Chromosome15 + View
Manihot esculenta Manes.08G139300 Chromosome08 + View
Manihot esculenta Manes.03G163600 Chromosome03 - View
Medicago truncatula Medtr1g075990 DUF640 family protein chr1 - View
Medicago truncatula Medtr7g097030 G1-like protein chr7 + View
Medicago truncatula Medtr1g069825 G1-like protein chr1 - View
Nelumbo nucifera Nn1g02791 chr1 + View
Olea europaea Oeu055235.1 scaffold69 + View
Oryza sativa ssp. japonica Os02g0623400 Similar to G1-like protein. chr02 - View
Punica granatum PGR031G0317 NC_045127.1 + View
Punica granatum PGR004G2903 NC_045131.1 + View
Prunus persica Prupe.8G222300 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Pp08 - View
Prunus persica Prupe.1G040300 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Pp01 + View
Papaver somniferum PSO063G6873 NC_039364.1 + View
Populus trichocarpa Potri.010G070700 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr10 - View
Populus trichocarpa Potri.013G046500 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr13 + View
Populus trichocarpa Potri.002G037500 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr02 - View
Populus trichocarpa Potri.008G167700 PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr08 + View
Populus trichocarpa Potri.005G225600 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr05 + View
Phaseolus vulgaris Phvul.007G192200 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr07 + View
Phaseolus vulgaris Phvul.007G108200 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr07 - View
Phaseolus vulgaris Phvul.007G274100 PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Chr07 + View
Phaseolus vulgaris Phvul.001G161400 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr01 + View
Quercus lobata QL06p018186 6 + View
Quercus lobata QL03p030755 3 - View
Rosa chinensis RcHm_v2.0_Chr6g0287901 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr4g0393491 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim01G0262500 chr01 - View
Salvia bowleyana SalBow4G2237 GWHASIU00000008 - View
Salvia bowleyana SalBow6G5630 GWHASIU00000002 - View
Salvia bowleyana SalBow3G3670 GWHASIU00000006 - View
Salix brachista Sabra08G0127800 GWHAAZH00000008 + View
Salix brachista Sabra05G0174100 GWHAAZH00000005 + View
Salix brachista Sabra13G0042600 GWHAAZH00000013 + View
Salix brachista Sabra02G0030300 GWHAAZH00000002 - View
Salix brachista Sabra10G0036700 GWHAAZH00000010 + View
Simmondsia chinensis Sc13g0005760 GWHAASQ00000013 + View
Sechium edule Sed0015423 LG05 + View
Trochodendron aralioides TAR636G2910 group1 - View
Trochodendron aralioides TAR633G1028 group2 - View
Trochodendron aralioides TAR365G0386 group16 - View
Theobroma cacao Thecc.05G271300 Uncharacterized protein Chromosome_5 - View
Theobroma cacao Thecc.01G256900 IQ motif and SEC7 domain-containing protein 2 Chromosome_1 - View
Theobroma cacao Thecc.04G256400 Uncharacterized protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104808627 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 NW_010964923.1 + View
Trifolium pratense TPR.G1473 Tp57577_TGAC_v2_LG5 + View
Trifolium pratense TPR.G25183 Tp57577_TGAC_v2_scaf_174 + View
Tripterygium wilfordii TWI09G0315 NC_052245.1 - View
Tripterygium wilfordii TWI53G1672 NC_052244.1 - View
Vaccinium macrocarpon vmacro02669 Similar to LSH3: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0139 CM024071.1 - View
Vigna mungo VMungo1383G1654 CM024070.1 + View
Vigna mungo VMungo0720G1883 CM024071.1 - View
Vitis vinifera GSVIVG01027827001 chr5 + View
Vitis vinifera GSVIVG01028348001 chr7 + View
Zea mays Zm00001eb045800 Zm00001e004570 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 1 + View
Zea mays Zm00001eb185130 Zm00001e023022 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 4 - View