Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold44G16752 scaffold44 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8970 LG-3 - View
Acer truncatum Atru.chr1.352 chr1 + View
Acer truncatum Atru.ctg97_1.29 ctg97_1 - View
Actinidia chinensis Actinidia02825 Lachesis_group16 - View
Arabidopsis lyrata AL7G27300 scaffold_7 + View
Arabidopsis lyrata AL8G27120 scaffold_8 - View
Avicennia marina MSTRG.27083 ScioBoG_8578_HRSCAF_8617 + View
Avicennia marina MSTRG.8709 ScioBoG_11560_HRSCAF_11609 + View
Arabidopsis thaliana AT4G25740 RNA binding Plectin/S10 domain-containing protein RNA binding Plectin/S10 domain-containing protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C cytosolic ribosome%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Plectin/S10%2C N-terminal (InterPro:IPR005326)%3B BEST Arabidopsis thaliana protein match is: RNA binding Plectin/S10 domain-containing protein (TAIR:AT5G52650.1)%3B Has 2455 Blast hits to 1939 proteins in 382 species: Archae - 0%3B Bacteria - 320%3B Metazoa - 798%3B Fungi - 208%3B Plants - 219%3B Viruses - 1%3B Other Eukaryotes - 909 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT5G52650 RNA binding Plectin/S10 domain-containing protein RNA binding Plectin/S10 domain-containing protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C cytosolic ribosome%2C cell wall%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Plectin/S10%2C N-terminal (InterPro:IPR005326)%3B BEST Arabidopsis thaliana protein match is: RNA binding Plectin/S10 domain-containing protein (TAIR:AT4G25740.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica napus C07p54520 C07 - View
Brassica napus A01p16980 A01 - View
Brassica napus A10p10190 A10 - View
Brassica oleracea BolC7t45938H C7 - View
Brassica rapa BraA01t01654Z A01 - View
Brassica rapa BraA03t14693Z A03 - View
Beta vulgaris EL10Ac3g05416 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) Chr3_EL10_PGA_scaffold7 + View
Camellia sinensis var. sinensis CSS0039436 40S ribosomal S10-3 -like protein [Gossypium arboreum] Chr3 - View
Cannabis sativa CANSAT21G0342 NC_044374.1 - View
Corylus avellana Haze_00049 Similar to RPS10-1: 40S ribosomal protein S10-1 (Oryza sativa subsp. japonica OX%3D39947) 1 - View
Coffea canephora Cc02_g02340 40S ribosomal protein S10 chr2 + View
Citrus clementina Ciclev10006024m.g scaffold_9 - View
Carya illinoinensis CiPaw.12G090000 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) Chr12 + View
Carya illinoinensis CiPaw.11G130600 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) Chr11 + View
Citrullus lanatus ClCG01G002390 40S ribosomal protein S10, putative CG_Chr01 + View
Cucumis melo MELO3C005706.2 40S ribosomal protein S10-1 chr09 - View
Carica papaya Cpa.g.sc107.113 supercontig_107 - View
Capsella rubella Carub.0008s1277 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) scaffold_8 - View
Daucus carota DCAR_020272 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv35256 GWHABJS00000009 + View
Davidia involucrata Dinv38905 GWHABJS00000003 + View
Durio zibethinus Duzib084G0619 NW_019167827.1 + View
Durio zibethinus Duzib205G1918 NW_019168381.1 - View
Durio zibethinus Duzib205G0207 NW_019168381.1 - View
Durio zibethinus Duzib068G1231 NW_019167838.1 - View
Durio zibethinus Duzib068G0440 NW_019167838.1 + View
Durio zibethinus Duzib084G0112 NW_019167827.1 - View
Erigeron canadensis ECA232G2946 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA233G0396 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.E00655 Chr05 - View
Erythranthe guttata Migut.F00287 scaffold_6 + View
Erythranthe guttata Migut.F01084 scaffold_6 + View
Eutrema salsugineum Thhalv10014804m.g K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) scaffold_2 + View
Fragaria x ananassa FAN03G1722 PF03501 - Plectin/S10 domain (S10_plectin) Fvb7-3 + View
Fragaria x ananassa FAN03G2529 PF03501 - Plectin/S10 domain (S10_plectin) Fvb7-3 + View
Fragaria x ananassa FAN04G0764 PTHR12146//PTHR12146:SF7 - 40S RIBOSOMAL PROTEIN S10 // SUBFAMILY NOT NAMED Fvb5-4 - View
Fragaria x ananassa FAN13G2665 PTHR12146//PTHR12146:SF7 - 40S RIBOSOMAL PROTEIN S10 // SUBFAMILY NOT NAMED Fvb5-2 - View
Gossypium hirsutum Gohir.A09G182800 PTHR12146//PTHR12146:SF7 - 40S RIBOSOMAL PROTEIN S10 // SUBFAMILY NOT NAMED A09 - View
Glycine max Glyma.05G211100 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) Gm05 - View
Gossypium raimondii Gorai.006G051300 Chr06 - View
Hydrangea macrophylla Hma1.2p1_0274F.1_g110110 Hma1.2p1_0274F.1 + View
Lupinus albus Lalb_Chr21g0305251 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) Lalb_Chr21 - View
Lonicera japonica Lj8A16T36 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_8_6540 Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_2_131381 Lsat_1_v8_lg_2 + View
Malus domestica MD06G1089600 RNA binding Plectin/S10 domain-containing protein Chr06 - View
Malus domestica MD14G1110700 RNA binding Plectin/S10 domain-containing protein Chr14 - View
Manihot esculenta Manes.14G022200 Chromosome14 + View
Manihot esculenta Manes.06G152900 Chromosome06 - View
Nelumbo nucifera Nn1g01645 chr1 - View
Punica granatum PGR042G0410 NC_045130.1 + View
Punica granatum PGR042G3313 NC_045130.1 + View
Populus trichocarpa Potri.017G146700 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) Chr17 - View
Populus trichocarpa Potri.004G073500 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) Chr04 + View
Quercus lobata QL09p012704 9 + View
Rhododendron simsii Rhsim07G0011500 chr07 + View
Salix brachista Sabra04G0048200 GWHAAZH00000004 + View
Salix brachista Sabra17G0122900 GWHAAZH00000017 - View
Simmondsia chinensis Sc13g0009200 GWHAASQ00000013 - View
Simmondsia chinensis Sc19g0001220 GWHAASQ00000019 + View
Sechium edule Sed0019809 LG01 + View
Schrenkiella parvula Sp6g14820 K02947 - small subunit ribosomal protein S10e (RP-S10e, RPS10) ch6-6 - View
Selenicereus undatus Hund04789 Scaffold_19641 - View
Selenicereus undatus Hund11717 Scaffold_33679 + View
Trochodendron aralioides TAR374G0444 group12 - View
Trochodendron aralioides TAR629G1252 group0 - View
Trochodendron aralioides TAR375G0423 group15 - View
Theobroma cacao Thecc.03G184700 RNA binding Plectin/S10 domain-containing protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104811954 40S ribosomal protein S10-1-like NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104825112 40S ribosomal protein S10-1 NW_010966986.1 - View
Trifolium pratense TPR.G12911 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI23G0565 NC_052239.1 + View
Vigna mungo VMungo0251G3796 CM024069.1 - View
Vitis vinifera GSVIVG01028854001 chr16 - View