Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold37G14724 scaffold37 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G1010 LG-4 + View
Acer truncatum Atru.chr10.2401 chr10 + View
Actinidia chinensis Actinidia18241 Lachesis_group13 - View
Actinidia chinensis Actinidia25455 Lachesis_group1 + View
Arabidopsis lyrata AL2G40650 scaffold_2 - View
Avicennia marina MSTRG.22788 ScioBoG_3703_HRSCAF_3719 + View
Amaranthus hybridus Ah.01g006820 60S ribosomal protein L7-1 AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy7G03466 CHR07 - View
Arabidopsis thaliana AT1G80750 Ribosomal protein L30/L7 family protein Ribosomal protein L30/L7 family protein%3B FUNCTIONS IN: structural constituent of ribosome%2C transcription regulator activity%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic large ribosomal subunit%2C nucleolus%2C large ribosomal subunit%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L30%2C N-terminal (InterPro:IPR012988)%2C Ribosomal protein L7%2C eukaryotic (InterPro:IPR005998)%2C Ribosomal protein L30p/L7e%2C conserved region (InterPro:IPR000517)%2C Ribosomal protein L30%2C ferredoxin-like fold domain (InterPro:IPR016082)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1)%3B Has 1152 Blast hits to 1152 proteins in 343 species: Archae - 126%3B Bacteria - 0%3B Metazoa - 424%3B Fungi - 213%3B Plants - 191%3B Viruses - 0%3B Other Eukaryotes - 198 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB02g07249 ChrB02 - View
Brassica carinata BcaC08g45337 ChrC08 + View
Brassica carinata BcaC03g15937 ChrC03 - View
Brassica carinata BcaB05g25232 ChrB05 - View
Brassica napus C06p29490 C06 + View
Brassica napus C02p36970 C02 - View
Brassica napus A07p26840 A07 + View
Brassica napus A02p23200 A02 - View
Brassica napus A07p44930 A07 - View
Brassica oleracea BolC6t38113H C6 + View
Brassica oleracea BolC2t09712H C2 - View
Brassica rapa BraA07t30327Z A07 + View
Brassica rapa BraA02t07317Z A02 - View
Beta vulgaris EL10Ac9g22221 PTHR11524//PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7 // 60S RIBOSOMAL PROTEIN L7-1 Chr9_EL10_PGA_scaffold8 - View
Camellia sinensis var. sinensis CSS0004823 PREDICTED: 60S ribosomal protein L7-2-like [Nicotiana sylvestris] Chr15 - View
Capsicum annuum CAN.G407.52 PGAv.1.6.scaffold407 + View
Capsicum annuum CAN.G1490.9 PGAv.1.6.scaffold1490 - View
Coffea canephora Cc04_g04960 60S ribosomal protein L7-1 chr4 + View
Citrus clementina Ciclev10026334m.g scaffold_7 + View
Cardamine hirsuta CARHR073730 60S ribosomal protein L7, putative Chr2 - View
Carya illinoinensis CiPaw.01G253500 PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7-1 Chr01 + View
Carica papaya Cpa.g.sc10.93 supercontig_10 - View
Capsella rubella Carub.0002s2679 PTHR11524//PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7 // 60S RIBOSOMAL PROTEIN L7-1 scaffold_2 - View
Daucus carota DCAR_025577 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv23297 GWHABJS00000019 - View
Erigeron canadensis ECA232G1104 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.J03102 Chr10 + View
Erythranthe guttata Migut.I00714 scaffold_9 + View
Eutrema salsugineum Thhalv10019044m.g PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7-1 scaffold_9 + View
Fragaria x ananassa FAN09G1387 K02937 - large subunit ribosomal protein L7e (RP-L7e, RPL7) Fvb6-2 + View
Fragaria x ananassa FAN02G0347 PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7-1 Fvb6-4 - View
Fragaria x ananassa FAN05G3781 K02937 - large subunit ribosomal protein L7e (RP-L7e, RPL7) Fvb6-3 + View
Fragaria x ananassa FAN14G0576 PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7-1 Fvb6-1 + View
Fragaria vesca FvH4_6g28820 K02937 - large subunit ribosomal protein L7e (RP-L7e, RPL7) Fvb6 - View
Helianthus annuus HanXRQChr16g0499641 Probable ribosomal protein L30/L7 family protein HanXRQChr16 + View
Helianthus annuus HanXRQChr09g0274511 Putative ribosomal protein L7, eukaryotic HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0135F.1_g061840 Hma1.2p1_0135F.1 + View
Lonicera japonica Lj5A79T33 GWHAAZE00000005 + View
Malus domestica MD17G1221600 Ribosomal protein L30/L7 family protein Chr17 + View
Manihot esculenta Manes.11G064900 Chromosome11 + View
Nicotiana tabacum Nitab4.5_0000373g0260 Ribosomal protein L30, ferredoxin-like fold domain, Ribosomal protein L30, N-terminal, Ribosomal protein L7, eukaryotic Nitab4.5_0000373 + View
Nicotiana tabacum Nitab4.5_0001454g0110 Ribosomal protein L30, ferredoxin-like fold domain, Ribosomal protein L30, N-terminal Nitab4.5_0001454 + View
Olea europaea Oeu027832.1 chr12 - View
Petunia axillaris Peaxi162Scf00332g00426 60S ribosomal protein L7-1 Peaxi162Scf00332 + View
Punica granatum PGR031G0594 NC_045127.1 - View
Prunus persica Prupe.3G096800 PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7-1 Pp03 - View
Populus trichocarpa Potri.001G047400 PTHR11524//PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7 // 60S RIBOSOMAL PROTEIN L7-1 Chr01 + View
Populus trichocarpa Potri.003G180700 PTHR11524//PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7 // 60S RIBOSOMAL PROTEIN L7-1 Chr03 - View
Rosa chinensis RcHm_v2.0_Chr2g0133291 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim12G0188200 chr12 - View
Salvia bowleyana SalBow6G3360 GWHASIU00000002 + View
Salvia bowleyana SalBow6G5685 GWHASIU00000002 + View
Salix brachista Sabra03G0132200 GWHAAZH00000003 - View
Salix brachista Sabra01G0032700 GWHAAZH00000001 + View
Simmondsia chinensis Sc10g0006200 GWHAASQ00000010 - View
Sapria himalayana SHI11248 scaffold13_12996478 + View
Solanum lycopersicum Solyc06g068400.3 60S ribosomal protein L7-like protein (AHRD V3.3 *** B3TM16_ELAGV) SL4.0ch06 + View
Solanum lycopersicum Solyc03g117060.4 60S ribosomal protein L7-1 (AHRD V3.3 *** A0A2G2WQS6_CAPBA) SL4.0ch03 - View
Schrenkiella parvula Sp5g35010 PTHR11524//PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7 // 60S RIBOSOMAL PROTEIN L7-1 ch5-7 - View
Solanum pennellii Sopen06g025660 Ribosomal protein L30/L7 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal , Ribosomal protein L30p/L7e, conserved region , Ribosomal protein L30, conserved site , Ribosomal protein L30, ferredoxin-like fold domain | BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein Spenn-ch06 + View
Solanum pennellii Sopen03g035970 Ribosomal protein L30/L7 family protein | FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal , Ribosomal protein L7, eukaryotic , Ribosomal protein L30p/L7e, conserved region , Ribosomal protein L30, ferredoxin-like fold domain | BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400028524 60S ribosomal protein L7 ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400014191 60S ribosomal protein L7 ST4.03ch03 - View
Selenicereus undatus Hund06527 Scaffold_33676 - View
Trochodendron aralioides TAR626G1655 group3 - View
Tarenaya hassleriana THA.LOC104812434 60S ribosomal protein L7-1 NW_010965372.1 - View
Tarenaya hassleriana THA.LOC104808182 60S ribosomal protein L7-1-like NW_010964598.1 - View
Tripterygium wilfordii TWI18G1267 NC_052241.1 + View
Tripterygium wilfordii TWI12G0192 NC_052243.1 - View
Utricularia gibba unitig_52.g17473 unitig_52 + View
Vaccinium macrocarpon vmacro16863 Similar to RPL7A: 60S ribosomal protein L7-1 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View