Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold69G23360 scaffold69 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G130 LG-4 - View
Actinidia chinensis Actinidia32730 Lachesis_group27 + View
Actinidia chinensis Actinidia21680 Lachesis_group1 - View
Arabidopsis lyrata AL2G41710 scaffold_2 + View
Avicennia marina MSTRG.11053 ScioBoG_14204_HRSCAF_14270 - View
Amaranthus hybridus Ah.01g005550 30S ribosomal protein S17, chloroplastic (Chloroplastic small ribosomal subunit protein uS17c) AmaHy_arrow1_Scaffold_1 + View
Amaranthus hybridus Ah.01g021630 AmaHy_arrow1_Scaffold_1 + View
Arabidopsis thaliana AT1G79850 ribosomal protein S17 nuclear-encoded 30S chloroplast ribosomal protein S17 ribosomal protein S17 (RPS17)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C plastid small ribosomal subunit%2C chloroplast stroma%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Ribosomal protein S17%2C conserved site (InterPro:IPR019979)%2C Ribosomal protein S17 (InterPro:IPR000266)%3B BEST Arabidopsis thaliana protein match is: Nucleic acid-binding%2C OB-fold-like protein (TAIR:AT1G49400.1)%3B Has 7449 Blast hits to 7449 proteins in 2625 species: Archae - 136%3B Bacteria - 5329%3B Metazoa - 5%3B Fungi - 63%3B Plants - 102%3B Viruses - 0%3B Other Eukaryotes - 1814 (source: NCBI BLink). Chr1 - View
Beta vulgaris EL10Ac9g22030 K02961 - small subunit ribosomal protein S17 (RP-S17, MRPS17, rpsQ) Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0016455 PREDICTED: 30S ribosomal protein S17, chloroplastic [Nicotiana tomentosiformis] Chr15 - View
Capsicum annuum CAN.G438.28 PGAv.1.6.scaffold438 + View
Cannabis sativa CANSAT56G1509 NC_044371.1 - View
Cicer arietinum L. Ca_01132_v3 Ca_LG1_v3 + View
Corylus avellana Haze_16361 Similar to RPS17: 30S ribosomal protein S17, chloroplastic (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g03040 30S ribosomal protein S17, chloroplastic chr4 - View
Citrus clementina Ciclev10026679m.g scaffold_7 - View
Carpinus fangiana Cfa002095 Cfa01 + View
Cardamine hirsuta CARHR074660 30S ribosomal protein S17, putative Chr2 + View
Carya illinoinensis CiPaw.02G148800 PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Chr02 - View
Citrullus lanatus ClCG09G001940 30S ribosomal protein S17, putative CG_Chr09 - View
Cucumis melo MELO3C024255.2 30S ribosomal protein S17, chloroplastic chr01 + View
Corchorus olitorius COL.COLO4_30435 Ribosomal protein S17 AWUE01020729.1 + View
Chenopodium quinoa AUR62011660 RPS17: 30S ribosomal protein S17, chloroplastic C_Quinoa_Scaffold_3333 + View
Chenopodium quinoa AUR62016483 RPS17: 30S ribosomal protein S17, chloroplastic C_Quinoa_Scaffold_3514 + View
Capsella rubella Carub.0002s2765 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC scaffold_2 + View
Cucumis sativus L. CsaV3_7G033420 30S ribosomal protein S17 chr7 + View
Daucus carota DCAR_016211 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv38021 GWHABJS00000006 + View
Durio zibethinus Duzib160G0510 NW_019168015.1 + View
Durio zibethinus Duzib235G0379 NW_019167982.1 + View
Eucalyptus grandis Eucgr.F03039 Chr06 + View
Erythranthe guttata Migut.I00941 scaffold_9 - View
Eutrema salsugineum Thhalv10019289m.g PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC scaffold_9 + View
Fragaria x ananassa FAN14G0180 PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Fvb6-1 - View
Fragaria x ananassa FAN05G4262 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Fvb6-3 - View
Fragaria x ananassa FAN09G1878 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Fvb6-2 - View
Fragaria x ananassa FAN02G0676 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Fvb6-4 - View
Fragaria vesca FvH4_6g31770 PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Fvb6 + View
Gossypium hirsutum Gohir.A10G081300 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC A10 + View
Gossypium hirsutum Gohir.A05G131800 K02961 - small subunit ribosomal protein S17 (RP-S17, MRPS17, rpsQ) A05 + View
Gossypium hirsutum Gohir.D10G070100 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC D10 - View
Gossypium hirsutum Gohir.D05G131300 K02961 - small subunit ribosomal protein S17 (RP-S17, MRPS17, rpsQ) D05 + View
Glycine max Glyma.13G357200 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Gm13 - View
Glycine max Glyma.15G016400 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Gm15 + View
Gossypium raimondii Gorai.011G074400 Chr11 - View
Gossypium raimondii Gorai.009G135000 Chr09 + View
Helianthus annuus HanXRQChr12g0360791 Probable ribosomal protein S17 HanXRQChr12 + View
Hydrangea macrophylla Hma1.2p1_1195F.1_g265790 Hma1.2p1_1195F.1 + View
Lupinus albus Lalb_Chr22g0351371 PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Lalb_Chr22 - View
Lotus japonicus Lj3g0008796 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC chr3 - View
Lonicera japonica Lj5C58T14 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_130940 PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Lsat_1_v8_lg_5 + View
Malus domestica MD09G1209400 ribosomal protein S17 Chr09 - View
Malus domestica MD17G1191100 ribosomal protein S17 Chr17 - View
Manihot esculenta Manes.04G130000 Chromosome04 + View
Medicago truncatula Medtr2g101770 30S ribosomal protein S17 chr2 - View
Nelumbo nucifera Nn2g11694 chr2 - View
Nicotiana tabacum Nitab4.5_0001315g0190 Ribosomal protein S17, Nucleic acid-binding, OB-fold Nitab4.5_0001315 - View
Olea europaea Oeu033507.1 chr1 + View
Petunia axillaris Peaxi162Scf00015g00005 30S ribosomal protein S17, chloroplastic Peaxi162Scf00015 + View
Punica granatum PGR102G3343 NC_045129.1 + View
Prunus persica Prupe.3G067300 PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Pp03 - View
Populus trichocarpa Potri.001G184000 PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Chr01 + View
Phaseolus vulgaris Phvul.005G168800 PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Chr05 + View
Quercus lobata QL05p021654 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0138941 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0223400 chr08 + View
Salvia bowleyana SalBow2G0408 GWHASIU00000007 - View
Salix brachista Sabra01G0155400 GWHAAZH00000001 - View
Simmondsia chinensis Sc12g0009460 GWHAASQ00000012 + View
Sechium edule Sed0002776 LG07 - View
Solanum lycopersicum Solyc03g120630.4 30S ribosomal protein S17, chloroplastic (AHRD V3.3 *** A0A2G2WPB4_CAPBA) SL4.0ch03 - View
Solanum tuberosum PGSC0003DMG400002547 30S ribosomal protein S17 ST4.03ch03 - View
Trochodendron aralioides TAR383G1034 group10 + View
Trochodendron aralioides TAR626G0023 group3 - View
Theobroma cacao Thecc.06G092400 Ribosomal protein S17 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104800422 30S ribosomal protein S17%2C chloroplastic NW_010969548.1 - View
Trifolium pratense TPR.G37258 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI12G0791 NC_052243.1 + View
Tripterygium wilfordii TWI75G0440 NC_052253.1 - View
Vaccinium macrocarpon vmacro18887 Similar to RPS17: 30S ribosomal protein S17, chloroplastic (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0744 CM024079.1 + View
Vitis vinifera GSVIVG01017072001 chr9 + View