Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold153G36918 scaffold153 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G26460 LG-1 - View
Aethionema arabicum Aa31LG10G14500 LG-10 - View
Acer truncatum Atru.chr5.162 chr5 - View
Acer truncatum Atru.chr9.1261 chr9 - View
Actinidia chinensis Actinidia12153 Lachesis_group0 + View
Actinidia chinensis Actinidia02162 Lachesis_group23 + View
Actinidia chinensis Actinidia40390 Lachesis_group8 + View
Arabidopsis lyrata AL4G44010 scaffold_4 - View
Arabidopsis lyrata AL5G42630 scaffold_5 - View
Arabidopsis lyrata AL7G37880 scaffold_7 - View
Avicennia marina MSTRG.17140 ScioBoG_19743_HRSCAF_19834 - View
Avicennia marina MSTRG.20702 ScioBoG_26180_HRSCAF_26306 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.899DFR PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PF87F4 PTHR24326:SF269 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-4 arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XFR3BT PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT3G60390 homeobox-leucine zipper protein 3 Encodes homeobox protein HAT3. homeobox-leucine zipper protein 3 (HAT3)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C transcription%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: HD-ZIP protein%2C N-terminal (InterPro:IPR006712)%2C Homeobox%2C conserved site (InterPro:IPR017970)%2C Homeobox (InterPro:IPR001356)%2C Homeodomain-like (InterPro:IPR009057)%2C Leucine zipper%2C homeobox-associated (InterPro:IPR003106)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 4 (TAIR:AT2G44910.1)%3B Has 9598 Blast hits to 9528 proteins in 546 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 7082%3B Fungi - 271%3B Plants - 2066%3B Viruses - 4%3B Other Eukaryotes - 175 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT2G44910 homeobox-leucine zipper protein 4 Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. homeobox-leucine zipper protein 4 (HB4)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: response to hormone stimulus%2C shade avoidance%2C regulation of transcription%2C DNA-dependent%2C response to far red light%2C regulation of gene-specific transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Homeobox%2C conserved site (InterPro:IPR017970)%2C Homeobox (InterPro:IPR001356)%2C HD-ZIP protein%2C N-terminal (InterPro:IPR006712)%2C Homeodomain-like (InterPro:IPR009057)%2C Leucine zipper%2C homeobox-associated (InterPro:IPR003106)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 3 (TAIR:AT3G60390.1)%3B Has 8851 Blast hits to 8789 proteins in 513 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 6351%3B Fungi - 241%3B Plants - 2079%3B Viruses - 4%3B Other Eukaryotes - 174 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB02g08865 ChrB02 + View
Brassica carinata BcaB06g29405 ChrB06 - View
Brassica carinata BcaC02g07121 ChrC02 - View
Brassica carinata BcaC02g12263 ChrC02 + View
Brassica carinata BcaC06g31393 ChrC06 + View
Brassica carinata BcaC09g50417 ChrC09 + View
Brassica napus A04p33540 A04 - View
Brassica napus C04p71300 C04 - View
Brassica napus C01p25670 C01 - View
Brassica napus A06p45120 A06 + View
Brassica napus C04p05860 C04 - View
Brassica napus A09p52660 A09 - View
Brassica napus A01p20430 A01 - View
Brassica napus C08p35380 C08 - View
Brassica oleracea BolC4t28634H C4 - View
Brassica oleracea BolC1t02521H C1 - View
Brassica oleracea BolC8t51131H C8 - View
Brassica oleracea BolC4t22215H C4 - View
Brassica rapa BraA04t18816Z A04 - View
Brassica rapa BraA09t40695Z A09 - View
Beta vulgaris EL10Ac1g00783 PTHR24326:SF235 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Chr1_EL10_PGA_scaffold3 - View
Camellia sinensis var. sinensis CSS0006191 PREDICTED: homeobox-leucine zipper protein HAT4 [Vitis vinifera] Chr12 - View
Camellia sinensis var. sinensis CSS0030219 unnamed protein product [Coffea canephora] Chr3 - View
Capsicum annuum CAN.G362.12 PGAv.1.6.scaffold362 - View
Cicer arietinum L. Ca_21992_v3 Ca_LG7_v3 + View
Corylus avellana Haze_02806 Similar to HAT3: Homeobox-leucine zipper protein HAT3 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc02_g24900 Homeobox-leucine zipper protein HAT3 chr2 + View
Citrus clementina Ciclev10021374m.g scaffold_3 - View
Citrus clementina Ciclev10021501m.g scaffold_3 + View
Ceratophyllum demersum CDE11G0361 9 - View
Ceratophyllum demersum CDE12G0378 10 + View
Ceratophyllum demersum CDE02G0945 1 + View
Ceratophyllum demersum CDE04G0015 2 - View
Carpinus fangiana Cfa011090 Cfa04 - View
Cardamine hirsuta CARHR170710 homeobox-leucine zipper protein 3 Chr5 - View
Cardamine hirsuta CARHR174030 Homeobox-leucine zipper protein, putative Chr6 + View
Cardamine hirsuta CARHR140150 homeobox-leucine zipper protein 4 Chr4 - View
Carya illinoinensis CiPaw.13G028000 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Chr13 - View
Carya illinoinensis CiPaw.12G049500 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) Chr12 - View
Carya illinoinensis CiPaw.14G021700 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) Chr14 - View
Citrullus lanatus ClCG05G000400 homeobox-leucine zipper protein 3 LENGTH=315 CG_Chr05 + View
Cucumis melo MELO3C005978.2 homeobox-leucine zipper protein HAT3-like chr06 + View
Carica papaya Cpa.g.sc101.29 supercontig_101 - View
Chenopodium quinoa AUR62023427 HAT3: Homeobox-leucine zipper protein HAT3 C_Quinoa_Scaffold_1352 - View
Chenopodium quinoa AUR62013727 HAT3: Homeobox-leucine zipper protein HAT3 C_Quinoa_Scaffold_1412 + View
Chenopodium quinoa AUR62019992 HAT2: Homeobox-leucine zipper protein HAT2 C_Quinoa_Scaffold_1480 - View
Capsella rubella Carub.0008s0041 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_8 + View
Capsella rubella Carub.0004s2750 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_4 - View
Capsella rubella Carub.0005s2712 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_3G007560 Homeobox-leucine zipper protein chr3 + View
Davidia involucrata Dinv39177 GWHABJS00000003 + View
Davidia involucrata Dinv44075 GWHABJS00000020 - View
Durio zibethinus Duzib133G1100 NW_019167938.1 - View
Durio zibethinus Duzib138G0517 NW_019167893.1 - View
Durio zibethinus Duzib205G0243 NW_019168381.1 - View
Durio zibethinus Duzib084G1196 NW_019167827.1 - View
Durio zibethinus Duzib068G0361 NW_019167838.1 - View
Erigeron canadensis ECA240G3387 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA240G3525 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.E01577 Chr05 + View
Eucalyptus grandis Eucgr.D02105 Chr04 + View
Erythranthe guttata Migut.B01552 scaffold_2 - View
Eutrema salsugineum Thhalv10000990m.g PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_20 - View
Eutrema salsugineum Thhalv10025903m.g PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10001549m.g PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_22 - View
Eutrema salsugineum Thhalv10006110m.g PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_19 + View
Fragaria x ananassa FAN01G1097 PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Fvb7-4 - View
Fragaria x ananassa FAN08G1066 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Fvb5-3 - View
Fragaria x ananassa FAN10G1554 PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Fvb7-1 + View
Fragaria x ananassa FAN10G3753 PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Fvb7-1 + View
Fragaria x ananassa FAN03G0797 PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Fvb7-3 - View
Fragaria x ananassa FAN06G1612 PTHR24326:SF235 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Fvb7-2 + View
Fragaria vesca FvH4_7g09820 PTHR24326:SF235 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Fvb7 + View
Gossypium hirsutum Gohir.A12G215000 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) A12 - View
Gossypium hirsutum Gohir.A12G096400 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) A12 + View
Gossypium hirsutum Gohir.D12G099200 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) D12 + View
Gossypium hirsutum Gohir.A11G076300 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) A11 - View
Gossypium hirsutum Gohir.D11G080800 PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 D11 - View
Gossypium hirsutum Gohir.D12G217600 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) D12 - View
Glycine max Glyma.09G241800 PTHR24326:SF269 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-4 Gm09 + View
Glycine max Glyma.07G112400 PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Gm07 + View
Glycine max Glyma.11G035900 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED Gm11 - View
Glycine max Glyma.18G253800 PTHR24326:SF269 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-4 Gm18 - View
Gossypium raimondii Gorai.007G086600 Chr07 - View
Gossypium raimondii Gorai.008G233200 Chr08 - View
Gossypium raimondii Gorai.008G107900 Chr08 + View
Lupinus albus Lalb_Chr13g0290491 PTHR24326:SF235 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Lalb_Chr13 + View
Lupinus albus Lalb_Chr07g0195531 PTHR24326:SF235 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Lalb_Chr07 - View
Lupinus albus Lalb_Chr19g0126601 PTHR24326//PTHR24326:SF235 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Lalb_Chr19 - View
Lotus japonicus Lj3g0021609 PTHR24326:SF235 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 chr3 + View
Lonicera japonica Lj8A270T22 GWHAAZE00000008 + View
Magnolia biondii MBI04_g34108_MAGBIO AED:0.16 Chr04 - View
Malus domestica MD02G1216800 homeobox-leucine zipper protein 3 Chr02 - View
Manihot esculenta Manes.02G041800 Chromosome02 + View
Manihot esculenta Manes.01G272100 Chromosome01 + View
Manihot esculenta Manes.05G052900 Chromosome05 + View
Medicago truncatula Medtr8g006705 homeobox associated leucine zipper protein chr8 + View
Nelumbo nucifera Nn1g00898 chr1 - View
Olea europaea Oeu063225.2 chr3 + View
Oryza sativa ssp. japonica Os10g0561800 Class II homeodomain-leucine zipper (HD-ZIP II) protein, HD-ZIP transcription factor, Regulation of tiller angle and shoot gravitropism, Regulation of the local distribution of auxin chr10 + View
Oryza sativa ssp. japonica Os04g0548700 Homeodomain-like containing protein. chr04 - View
Petunia axillaris Peaxi162Scf00102g00931 homeobox-leucine zipper protein 4 Peaxi162Scf00102 - View
Punica granatum PGR042G3804 NC_045130.1 - View
Punica granatum PGR004G0290 NC_045131.1 - View
Punica granatum PGR031G3353 NC_045127.1 - View
Prunus persica Prupe.5G064300 PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED Pp05 - View
Prunus persica Prupe.2G127300 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) Pp02 + View
Pisum sativum Psat4g225400 HD-ZIP protein N terminus chr4LG4 - View
Papaver somniferum PSO782G2247 NC_039365.1 + View
Papaver somniferum PSO063G1502 NC_039364.1 + View
Populus trichocarpa Potri.014G045100 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Chr14 + View
Populus trichocarpa Potri.001G155100 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Chr01 - View
Populus trichocarpa Potri.002G136400 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Chr02 + View
Phaseolus vulgaris Phvul.010G052200 PTHR24326:SF235 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 Chr10 - View
Quercus lobata QL04p030937 4 - View
Rhododendron simsii Rhsim07G0034700 chr07 + View
Salvia bowleyana SalBow5G3769 GWHASIU00000003 + View
Salix brachista Sabra02G0105800 GWHAAZH00000002 + View
Salix brachista Sabra14G0032900 GWHAAZH00000014 + View
Salix brachista Sabra01G0124700 GWHAAZH00000001 - View
Salix brachista Sabra03G0049700 GWHAAZH00000003 + View
Simmondsia chinensis Sc26g0001490 GWHAASQ00000026 + View
Sechium edule Sed0006646 LG12 + View
Solanum lycopersicum Solyc01g090460.3 HD-ZIP SL4.0ch01 - View
Schrenkiella parvula Sp5g02830 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) ch5-1 + View
Schrenkiella parvula Sp4g26980 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) ch4-6 - View
Schrenkiella parvula Sp2g12090 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) ch2-4 - View
Schrenkiella parvula Sp7g17330 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) ch7-4 - View
Solanum pennellii Sopen08g026800 Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. | homeobox protein 2 (HB-2) | CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal , Helix-turn-helix motif, lambda-like repressor , Homeobox , Homeobox, conserved site , Homeodomain-like , Leucine zipper, homeobox-associated , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein Spenn-ch08 - View
Solanum pennellii Sopen01g036250 Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. | homeobox protein 2 (HB-2) | CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal , Helix-turn-helix motif, lambda-like repressor , Homeobox , Homeobox, conserved site , Homeodomain-like , Leucine zipper, homeobox-associated , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400025984 HD-ZIP protein ST4.03ch01 - View
Trochodendron aralioides TAR374G1705 group12 - View
Theobroma cacao Thecc.03G246900 Homeobox-leucine zipper protein 4 / HD-ZIP protein Chromosome_3 - View
Theobroma cacao Thecc.01G392400 Homeobox-leucine zipper protein 4 / HD-ZIP protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104802489 homeobox-leucine zipper protein HAT3-like NW_010970490.1 + View
Trifolium pratense TPR.G33153 Tp57577_TGAC_v2_scaf_119 - View
Tripterygium wilfordii TWI14G0329 NC_052249.1 - View
Tripterygium wilfordii TWI59G0896 NC_052248.1 - View
Utricularia gibba unitig_0.g1323 unitig_0 + View
Vaccinium macrocarpon vmacro00013 Similar to HAT2: Homeobox-leucine zipper protein HAT2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13484 Similar to HAT4: Homeobox-leucine zipper protein HAT4 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G1160 CM024078.1 - View
Vigna mungo VMungo0251G2625 CM024069.1 + View
Vitis vinifera GSVIVG01018247001 chr15 - View
Zea mays Zm00001eb391120 Zm00001e153375 9 - View
Zea mays Zm00001eb023620 Zm00001e002355 Homeobox-leucine zipper protein HAT4 1 + View