Gene: Carub.0008s0041

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0041
  • Transcript Identifier Carub.0008s0041.1
  • Gene Type Coding gene
  • Location scaffold_8 : 140271-141436 : positive

Gene Family Information

  • ID HOM05D000393
  • #Genes/#Species 1261/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0041.v1.1
  • pacid 39252876
  • synonym Carubv10026931m.g

Descriptions

  • Description PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT5G47370
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G47370
GO:0009641
ISO
PLAZA Integrative Orthologyshade avoidance AT5G47370
GO:0009734
ISO
PLAZA Integrative Orthologyauxin-activated signaling pathway AT5G47370
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G47370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G47370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR003106 Leucine zipper, homeobox-associated
IPR009057 Homeobox-like domain superfamily
IPR006712 HD-ZIP protein, N-terminal
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)