Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL1G19580 scaffold_1 - View
Avicennia marina MSTRG.20408 ScioBoG_26180_HRSCAF_26306 - View
Arabidopsis thaliana AT1G09140 SERINE-ARGININE PROTEIN 30 Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010%2C 22:2926. SERINE-ARGININE PROTEIN 30 (ATSRP30)%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3)%3B Has 10547 Blast hits to 8837 proteins in 431 species: Archae - 0%3B Bacteria - 274%3B Metazoa - 6368%3B Fungi - 1180%3B Plants - 1529%3B Viruses - 86%3B Other Eukaryotes - 1110 (source: NCBI BLink). Chr1 - View
Beta vulgaris EL10Ac4g09907 PTHR24012:SF442 - SERINE/ARGININE-RICH SPLICING FACTOR 4 Chr4_EL10_PGA_scaffold1 + View
Cicer arietinum L. Ca_10134_v3 Ca_LG4_v3 - View
Corylus avellana Haze_04133 Similar to SR30: Serine/arginine-rich splicing factor SR30 (Arabidopsis thaliana OX%3D3702) 2 + View
Cardamine hirsuta CARHR009010 Arginine/serine-rich splicing factor, putative Chr1 - View
Capsella rubella Carub.0001s0843 scaffold_1 - View
Daucus carota DCAR_029392 hypothetical protein DCARv2_Chr9 + View
Fragaria x ananassa FAN14G5666 KOG0105 - Alternative splicing factor ASF/SF2 (RRM superfamily) Fvb6-1 - View
Gossypium hirsutum Gohir.A13G109900 PTHR23147//PTHR24012//PTHR24012:SF442 - SERINE/ARGININE RICH SPLICING FACTOR // FAMILY NOT NAMED // SERINE/ARGININE-RICH SPLICING FACTOR 4 A13 - View
Gossypium hirsutum Gohir.D13G112500 K12890 - splicing factor, arginine/serine-rich 1/9 (SFRS1_9) D13 - View
Gossypium raimondii Gorai.013G126300 Chr13 - View
Lotus japonicus Lj5g0006745 PTHR24012//PTHR24012:SF442 - FAMILY NOT NAMED // SERINE/ARGININE-RICH SPLICING FACTOR 4 chr5 + View
Malus domestica MD04G1199500 SERINE-ARGININE PROTEIN 30 Chr04 + View
Medicago truncatula Medtr1g083400 pre-mRNA-splicing factor SF2-like protein chr1 - View
Simmondsia chinensis Sc09g0002930 GWHAASQ00000009 + View
Solanum lycopersicum Solyc01g099810.3 Serine/arginine-rich-splicing factor SR34 (AHRD V3.3 *-* A0A0M9UMW1_NICAT) SL4.0ch01 - View
Schrenkiella parvula Sp1g07720 PTHR24012//PTHR24012:SF442 - FAMILY NOT NAMED // SERINE/ARGININE-RICH SPLICING FACTOR 4 ch1-1 - View