Gene: Solyc01g099810.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g099810.3
  • Transcript Identifier Solyc01g099810.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 82213389-82219033 : negative

Gene Family Information

  • ID HOM05D001413
  • #Genes/#Species 444/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g099810.3.1
  • uniprot A0A3Q7F8A6
  • gene_id Solyc01g099810

Descriptions

  • Description Serine/arginine-rich-splicing factor SR34 (AHRD V3.3 *-* A0A0M9UMW1_NICAT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G09140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
IBA
GOA Databasenuclear speck
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G09140
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G09140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SR30/34)