Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold192G40586 scaffold192 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G9240 LG-3 + View
Acer truncatum Atru.chr1.280 chr1 - View
Actinidia chinensis Actinidia31862 Lachesis_group21 + View
Actinidia chinensis Actinidia08622 Lachesis_group6 - View
Avicennia marina MSTRG.63 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.8492 ScioBoG_102841_HRSCAF_103114 - View
Avicennia marina MSTRG.8681 ScioBoG_11560_HRSCAF_11609 + View
Amaranthus hybridus Ah.05g179900 AmaHy_arrow1_Scaffold_5 - View
Amaranthus hybridus Ah.07g206070 AmaHy_arrow1_Scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q66BD2 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT3G61630 cytokinin response factor 6 CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos%2C cotyledons and leaves. cytokinin response factor 6 (CRF6)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: cytokinin response factor 5 (TAIR:AT2G46310.1)%3B Has 5693 Blast hits to 5625 proteins in 245 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 5682%3B Viruses - 2%3B Other Eukaryotes - 9 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G53290 cytokinin response factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. cytokinin response factor 3 (CRF3)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB05g22030 ChrB05 - View
Brassica carinata BcaC09g50524 ChrC09 + View
Brassica carinata BcaC08g45144 ChrC08 + View
Brassica carinata BcaC09g50948 ChrC09 - View
Brassica carinata BcaNung01607 Contig531 + View
Brassica napus C06p27630 C06 + View
Brassica oleracea BolC6t37932H C6 + View
Brassica rapa BraA02t06179Z A02 + View
Beta vulgaris EL10Ac3g05354 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Chr3_EL10_PGA_scaffold7 - View
Camellia sinensis var. sinensis CSS0014988 PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis vinifera] Chr7 + View
Capsicum annuum CAN.G108.20 PGAv.1.6.scaffold108 + View
Cicer arietinum L. Ca_24524_v3 Ca_LG8_v3 - View
Cicer arietinum L. Ca_16671_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_17499_v3 Ca_LG6_v3 - View
Coffea canephora Cc02_g01940 Putative Ethylene-responsive transcription factor CRF4 chr2 - View
Citrus clementina Ciclev10021073m.g scaffold_3 - View
Ceratophyllum demersum CDE04G2923 2 + View
Carpinus fangiana Cfa016357 Cfa06 + View
Cardamine hirsuta CARHR171960 Ethylene responsive transcription factor 1a Chr5 + View
Cardamine hirsuta CARHR231150 Ethylene-responsive transcription factor, putative Chr7 + View
Cardamine hirsuta CARHR266330 Ethylene-responsive transcription factor, putative Chr8 - View
Carya illinoinensis CiPaw.06G007000 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Chr06 + View
Carya illinoinensis CiPaw.05G258400 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Chr05 - View
Citrullus lanatus ClCG01G000610 Ethylene responsive transcription factor 1a CG_Chr01 - View
Citrullus lanatus ClCG05G001070 Ethylene-responsive transcription factor, putative CG_Chr05 + View
Citrullus lanatus ClCG05G008650 Ethylene responsive transcription factor 1a CG_Chr05 + View
Cucumis melo MELO3C005867.2 ethylene-responsive transcription factor CRF1-like chr09 + View
Cucumis melo MELO3C006059.2 Ethylene-responsive transcription factor, putative chr06 + View
Cucumis melo MELO3C006973.2 ethylene-responsive transcription factor CRF4-like chr06 + View
Carica papaya Cpa.g.sc3.43 supercontig_3 + View
Chenopodium quinoa AUR62023501 CRF4: Ethylene-responsive transcription factor CRF4 C_Quinoa_Scaffold_1606 - View
Chenopodium quinoa AUR62031484 CRF4: Ethylene-responsive transcription factor CRF4 C_Quinoa_Scaffold_2963 + View
Capsella rubella Carub.0008s1347 PTHR31194//PTHR31194:SF0 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED scaffold_8 - View
Capsella rubella Carub.0005s2832 PTHR31194//PTHR31194:SF0 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED scaffold_5 + View
Cucumis sativus L. CsaV3_5G000710 ethylene-responsive transcription factor CRF1-like chr5 - View
Daucus carota DCAR_020298 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_010628 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv28342 GWHABJS00000004 - View
Davidia involucrata Dinv35302 GWHABJS00000009 - View
Durio zibethinus Duzib205G0982 NW_019168381.1 + View
Durio zibethinus Duzib084G0902 NW_019167827.1 - View
Durio zibethinus Duzib068G0141 NW_019167838.1 - View
Erigeron canadensis ECA233G5103 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA238G2529 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.D01775 Chr04 - View
Eucalyptus grandis Eucgr.A02669 Chr01 - View
Erythranthe guttata Migut.F00247 scaffold_6 + View
Erythranthe guttata Migut.F01056 scaffold_6 + View
Erythranthe guttata Migut.E01228 scaffold_5 + View
Eutrema salsugineum Thhalv10026857m.g PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED scaffold_1 - View
Eutrema salsugineum Thhalv10006118m.g PTHR31194:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED scaffold_19 - View
Fragaria x ananassa FAN03G2089 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Fvb7-3 - View
Fragaria x ananassa FAN06G4388 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Fvb7-2 + View
Fragaria x ananassa FAN10G1432 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria x ananassa FAN01G0292 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Fvb7-4 - View
Fragaria x ananassa FAN06G3373 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Fvb7-2 + View
Fragaria x ananassa FAN10G1872 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria vesca FvH4_7g30930 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Fvb7 + View
Gossypium hirsutum Gohir.A12G110666 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED A12 + View
Gossypium hirsutum Gohir.A12G252200 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED A12 - View
Gossypium hirsutum Gohir.D12G253300 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.A07G139800 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED A07 - View
Gossypium hirsutum Gohir.D09G178300 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED D09 + View
Gossypium hirsutum Gohir.A11G094400 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED A11 + View
Gossypium hirsutum Gohir.A09G183600 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED A09 + View
Glycine max Glyma.04G238700 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gm04 - View
Glycine max Glyma.06G125100 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gm06 + View
Glycine max Glyma.01G224100 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gm01 + View
Glycine max Glyma.08G020900 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gm08 + View
Gossypium raimondii Gorai.007G105600 Chr07 + View
Gossypium raimondii Gorai.006G200400 Chr06 + View
Gossypium raimondii Gorai.008G271200 Chr08 - View
Helianthus annuus HanXRQChr14g0462771 Putative DNA-binding domain; AP2/ERF transcription factor ERF/PTI6 HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0327F.1_g126700 Hma1.2p1_0327F.1 + View
Lupinus albus Lalb_Chr08g0240641 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Lalb_Chr08 - View
Lupinus albus Lalb_Chr23g0271441 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Lalb_Chr23 + View
Lupinus albus Lalb_Chr05g0224291 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Lalb_Chr05 - View
Lotus japonicus LjContig00312_ERROPOS870357g0027833 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Contig00312_ERROPOS870357 - View
Lotus japonicus Lj1g0016537 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED chr1 - View
Lonicera japonica Lj1P1012T53 GWHAAZE00000001 + View
Lonicera japonica Lj3P911T16 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_2_134301 PTHR31194:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_8_5781 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 - View
Malus domestica MD07G1284200 cytokinin response factor 4 Chr07 + View
Manihot esculenta Manes.02G013200 Chromosome02 + View
Manihot esculenta Manes.06G156400 Chromosome06 + View
Manihot esculenta Manes.14G019032 Chromosome14 - View
Olea europaea Oeu036890.1 chr1 + View
Olea europaea Oeu037110.1 chr11 - View
Olea europaea Oeu049098.1 chr12 - View
Punica granatum PGR031G3394 NC_045127.1 + View
Punica granatum PGR042G2829 NC_045130.1 - View
Punica granatum PGR042G2011 NC_045130.1 - View
Papaver somniferum PSO384G3530 NC_039368.1 - View
Populus trichocarpa Potri.003G136300 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Chr03 + View
Quercus lobata QL09p011103 9 - View
Rhododendron simsii Rhsim02G0240600 chr02 + View
Rhododendron simsii Rhsim03G0198200 chr03 + View
Rhododendron simsii Rhsim09G0203500 chr09 + View
Salvia bowleyana SalBow4G1334 GWHASIU00000008 - View
Salvia bowleyana SalBow2G2078 GWHASIU00000007 + View
Salix brachista Sabra01G0070700 GWHAAZH00000001 - View
Salix brachista Sabra15G0017400 GWHAAZH00000015 - View
Salix brachista Sabra03G0098100 GWHAAZH00000003 + View
Salix brachista Sabra12G0022100 GWHAAZH00000012 - View
Salix brachista Sabra14G0069100 GWHAAZH00000014 + View
Simmondsia chinensis Sc25g0000810 GWHAASQ00000025 + View
Simmondsia chinensis Sc01g0010090 GWHAASQ00000001 + View
Simmondsia chinensis Sc22g0005210 GWHAASQ00000022 - View
Sechium edule Sed0006038 LG01 - View
Sechium edule Sed0001298 LG13 - View
Sechium edule Sed0015584 LG07 - View
Sechium edule Sed0004110 LG02 - View
Schrenkiella parvula Sp7g25910 PTHR31194//PTHR31194:SF0 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED ch7-5 - View
Schrenkiella parvula Sp5g01780 PTHR31194:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED ch5-1 - View
Schrenkiella parvula Sp7g21700 PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED ch7-4 + View
Schrenkiella parvula Sp6g15440 PTHR31194:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED ch6-6 - View
Solanum tuberosum PGSC0003DMG400036493 AP2/ERF domain-containing transcription factor ST4.03ch03 + View
Trochodendron aralioides TAR374G1231 group12 + View
Theobroma cacao Thecc.03G192000 Ethylene-responsive transcription factor Chromosome_3 + View
Tarenaya hassleriana THA.LOC104813277 ethylene-responsive transcription factor CRF4-like NW_010965372.1 - View
Tarenaya hassleriana THA.LOC104817607 ethylene-responsive transcription factor CRF6-like NW_010965946.1 + View
Tarenaya hassleriana THA.LOC104800285 ethylene-responsive transcription factor CRF4 NW_010969135.1 + View
Tripterygium wilfordii TWI23G0159 NC_052239.1 - View
Tripterygium wilfordii TWI81G0255 NC_052251.1 + View
Tripterygium wilfordii TWI14G0798 NC_052249.1 + View
Utricularia gibba unitig_37.g11979 unitig_37 - View
Utricularia gibba unitig_52.g17722 unitig_52 + View
Utricularia gibba unitig_0.g2460 unitig_0 + View
Vaccinium macrocarpon vmacro10102 Similar to CRF4: Ethylene-responsive transcription factor CRF4 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro23246 Similar to CRF4: Ethylene-responsive transcription factor CRF4 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2635 CM024074.1 - View
Vigna mungo VMungo1309G0702 CM024072.1 + View