Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.1642 chr8 - View
Actinidia chinensis Actinidia11330 Lachesis_group21 + View
Actinidia chinensis Actinidia39880 Lachesis_group17 + View
Avicennia marina MSTRG.5805 ScioBoG_102839_HRSCAF_103093 + View
Amaranthus hybridus Ah.08g210990 AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy1G00953 CHR01 - View
Aquilegia oxysepala Aqoxy2G01520 CHR02 + View
Aquilegia oxysepala Aqoxy2G01428 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.07Q55L K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IWP77A PTHR12620//PTHR12620:SF16 - U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PQW11P K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) arahy.Tifrunner.gnm1.Arahy.13 - View
Amborella trichopoda ATR0820G024 AmTr_v1.0_scaffold00040 - View
Beta vulgaris EL10Ac7g16999 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0034059 PREDICTED: splicing factor U2af small subunit B-like [Beta vulgaris subsp. vulgaris] Chr10 - View
Camellia sinensis var. sinensis CSS0034231 PREDICTED: splicing factor U2af small subunit B-like [Beta vulgaris subsp. vulgaris] Chr4 - View
Capsicum annuum CAN.G1138.10 PGAv.1.6.scaffold1138 + View
Capsicum annuum CAN.G644.36 PGAv.1.6.scaffold644 - View
Cannabis sativa CANSAT80G1629 NC_044372.1 + View
Cicer arietinum L. Ca_01683_v3 Ca_LG1_v3 - View
Cicer arietinum L. Ca_08964_v3 Ca_LG3_v3 + View
Corylus avellana Haze_19530 Similar to U2AF35B: Splicing factor U2af small subunit B (Arabidopsis thaliana OX%3D3702) 10 + View
Corylus avellana Haze_23457 Similar to U2AF35A: Splicing factor U2af small subunit A (Oryza sativa subsp. japonica OX%3D39947) 6 - View
Coffea canephora Cc01_g09880 Splicing factor U2af small subunit A chr1 - View
Coffea canephora Cc06_g05160 Splicing factor U2af small subunit A chr6 + View
Citrus clementina Ciclev10012216m.g scaffold_6 - View
Citrus clementina Ciclev10029043m.g scaffold_8 - View
Ceratophyllum demersum CDE02G4746 1 - View
Carya illinoinensis CiPaw.09G008100 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Chr09 + View
Carya illinoinensis CiPaw.13G141300 PTHR12620//PTHR12620:SF16 - U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT // SUBFAMILY NOT NAMED Chr13 - View
Carya illinoinensis CiPaw.10G004900 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Chr10 + View
Citrullus lanatus ClCG04G009760 Splicing factor U2af 38 kDa subunit CG_Chr04 + View
Cucumis melo MELO3C024515.2 splicing factor U2af small subunit B-like chr08 - View
Chenopodium quinoa AUR62041413 U2AF35B: Splicing factor U2af small subunit B C_Quinoa_Scaffold_3863 + View
Chenopodium quinoa AUR62038295 U2AF35A: Splicing factor U2af small subunit A C_Quinoa_Scaffold_2169 + View
Chenopodium quinoa AUR62023944 U2AF35A: Splicing factor U2af small subunit A C_Quinoa_Scaffold_3389 - View
Chenopodium quinoa AUR62033586 U2AF35B: Splicing factor U2af small subunit B C_Quinoa_Scaffold_1776 - View
Cucumis sativus L. CsaV3_6G040400 splicing factor U2af small subunit B-like chr6 + View
Daucus carota DCAR_020780 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv21264 GWHABJS00000021 - View
Davidia involucrata Dinv29420 GWHABJS00000007 - View
Davidia involucrata Dinv19822 GWHABJS00000015 + View
Durio zibethinus Duzib170G0329 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons NW_019167871.1 - View
Erigeron canadensis ECA238G3788 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA248G2699 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.B03897 Chr02 - View
Eucalyptus grandis Eucgr.K02078 Chr11 - View
Erythranthe guttata Migut.N02517 scaffold_14 - View
Erythranthe guttata Migut.L01751 scaffold_12 + View
Fragaria x ananassa FAN05G3396 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Fvb6-3 - View
Fragaria x ananassa FAN09G2644 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Fvb6-2 - View
Fragaria x ananassa FAN14G3478 PTHR12620//PTHR12620:SF16 - U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN02G4341 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Fvb6-4 - View
Fragaria vesca FvH4_6g17780 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Fvb6 + View
Gossypium hirsutum Gohir.D07G110950 PTHR12620//PTHR12620:SF16 - U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT // SUBFAMILY NOT NAMED D07 + View
Glycine max Glyma.03G190600 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Gm03 + View
Glycine max Glyma.12G181300 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Gm12 + View
Glycine max Glyma.19G191100 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Gm19 + View
Gossypium raimondii Gorai.001G119200 Chr01 + View
Hydrangea macrophylla Hma1.2p1_0651F.1_g195810 Hma1.2p1_0651F.1 + View
Lupinus albus Lalb_Chr20g0112211 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Lalb_Chr20 - View
Lupinus albus Lalb_Chr06g0173391 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Lalb_Chr06 - View
Lupinus albus Lalb_Chr22g0350601 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Lalb_Chr22 + View
Lupinus albus Lalb_Chr01g0004731 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Lalb_Chr01 + View
Lupinus albus Lalb_Chr02g0155111 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Lalb_Chr02 + View
Lotus japonicus Lj3g0004634 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) chr3 - View
Lotus japonicus Lj3g0023331 PTHR12620//PTHR12620:SF16 - U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT // SUBFAMILY NOT NAMED chr3 + View
Lotus japonicus Lj1g0014738 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) chr1 - View
Lonicera japonica Lj3A1004G90 GWHAAZE00000003 - View
Lonicera japonica Lj1A220T23 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_1_50340 Lsat_1_v8_lg_1 + View
Malus domestica MD03G1134000 U2 snRNP auxiliary factor small subunit Chr03 + View
Malus domestica MD12G1016800 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr12 + View
Malus domestica MD14G1014800 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr14 + View
Malus domestica MD11G1156400 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr11 + View
Manihot esculenta Manes.11G156300 Chromosome11 + View
Manihot esculenta Manes.09G060572 Chromosome09 - View
Manihot esculenta Manes.08G020350 Chromosome08 + View
Medicago truncatula Medtr2g084715 splicing factor U2af small subunit A-like protein chr2 + View
Medicago truncatula Medtr7g103630 splicing factor U2af small subunit A-like protein chr7 + View
Nelumbo nucifera Nn6g35063 chr6 - View
Nicotiana tabacum Nitab4.5_0000132g0230 Zinc finger, CCCH-type, Nucleotide-binding, alpha-beta plait, U2 auxiliary factor small subunit Nitab4.5_0000132 - View
Olea europaea Oeu023855.2 chr11 + View
Olea europaea Oeu050175.1 chr16 + View
Petunia axillaris Peaxi162Scf00110g01922 Splicing factor U2AF 35 kDa subunit Peaxi162Scf00110 + View
Prunus persica Prupe.7G118600 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Pp07 - View
Prunus persica Prupe.6G118600 Pp06 + View
Papaver somniferum PSO063G4017 NC_039364.1 + View
Papaver somniferum PSO339G6198 NC_039366.1 + View
Papaver somniferum PSO384G1979 NC_039368.1 - View
Populus trichocarpa Potri.004G188900 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Chr04 - View
Populus trichocarpa Potri.009G149600 PTHR12620//PTHR12620:SF16 - U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT // SUBFAMILY NOT NAMED Chr09 - View
Populus trichocarpa Potri.006G116700 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Chr06 - View
Phaseolus vulgaris Phvul.005G127700 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Chr05 - View
Phaseolus vulgaris Phvul.001G186200 K12836 - splicing factor U2AF 35 kDa subunit (U2AF1) Chr01 + View
Quercus lobata QL07p040666 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0472021 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim03G0081800 chr03 - View
Salix brachista Sabra04G0129200 GWHAAZH00000004 + View
Salix brachista Sabra06G0091000 GWHAAZH00000006 - View
Simmondsia chinensis Sc02g0001160 GWHAASQ00000002 - View
Sechium edule Sed0008858 LG14 - View
Solanum lycopersicum Solyc11g066830.2 Zinc finger transcription factor 68 SL4.0ch11 + View
Solanum lycopersicum Solyc10g083640.2 Zinc finger transcription factor 64 SL4.0ch10 - View
Solanum pennellii Sopen10g033110 U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. | U2AF35B | FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding | INVOLVED IN: photoperiodism, flowering | LOCATED IN: nucleus | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , U2 auxiliary factor small subunit | BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative Spenn-ch10 - View
Solanum pennellii Sopen11g026540 U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. | U2AF35B | FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding | INVOLVED IN: photoperiodism, flowering | LOCATED IN: nucleus | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , U2 auxiliary factor small subunit | BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400028265 U2 snrnp auxiliary factor, small subunit ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400026524 Splicing factor U2af small subunit A ST4.03ch11 + View
Trochodendron aralioides TAR623G1115 group7 - View
Trochodendron aralioides TAR633G0835 group2 - View
Trochodendron aralioides TAR636G0528 group1 + View
Theobroma cacao Thecc.09G292400 Zinc finger C-x8-C-x5-C-x3-H type family protein Chromosome_9 - View
Trifolium pratense TPR.G10244 Tp57577_TGAC_v2_LG6 - View
Trifolium pratense TPR.G32393 Tp57577_TGAC_v2_scaf_195 + View
Tripterygium wilfordii TWI77G0099 NC_052236.1 - View
Tripterygium wilfordii TWI74G1116 NC_052234.1 + View
Tripterygium wilfordii TWI75G0350 NC_052253.1 + View
Vaccinium macrocarpon vmacro08814 Similar to U2AF35B: Splicing factor U2af small subunit B (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro07368 Similar to U2AF35B: Splicing factor U2af small subunit B (Arabidopsis thaliana OX%3D3702) scaffold00230_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0204 CM024070.1 + View
Vigna mungo VMungo1080G0212 CM024079.1 + View
Vitis vinifera GSVIVG01033771001 chr8 - View