Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold6G03315 scaffold6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia16236 Lachesis_group24 + View
Avicennia marina MSTRG.18029 ScioBoG_19834_HRSCAF_19925 - View
Avicennia marina MSTRG.12801 ScioBoG_17730_HRSCAF_17811 - View
Arabidopsis thaliana AT1G55490 chaperonin 60 beta encodes the beta subunit of the chloroplast chaperonin 60%2C a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves%2C expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro. chaperonin 60 beta (CPN60B)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: protein folding%2C systemic acquired resistance%2C cell death%2C response to cold%2C chaperone mediated protein folding requiring cofactor%3B LOCATED IN: in 8 components%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperonin Cpn60%2C conserved site (InterPro:IPR018370)%2C Chaperonin Cpn60 (InterPro:IPR001844)%3B BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1)%3B Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804%3B Bacteria - 21846%3B Metazoa - 1741%3B Fungi - 1612%3B Plants - 841%3B Viruses - 2%3B Other Eukaryotes - 7363 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC01g01529 ChrC01 - View
Brassica napus C05p54420 C05 - View
Brassica napus A10p13850 A10 + View
Brassica rapa BraA08t32121Z A08 + View
Brassica rapa BraA10t43478Z A10 + View
Corylus avellana Haze_22933 Similar to RuBisCO large subunit-binding protein subunit beta, chloroplastic (Pisum sativum OX%3D3888) 6 + View
Coffea canephora Cc01_g00200 RuBisCO large subunit-binding protein subunit beta, chloroplastic chr1 - View
Citrus clementina Ciclev10014640m.g scaffold_2 + View
Carpinus fangiana Cfa009548 Cfa04 + View
Cardamine hirsuta CARHR045160 60 kDa chaperonin Chr1 - View
Carya illinoinensis CiPaw.13G177900 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Chr13 - View
Capsella rubella Carub.0001s4398 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED scaffold_1 - View
Daucus carota DCAR_012624 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv13481 GWHABJS00000007 - View
Erigeron canadensis ECA238G0215 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.B03593 Chr02 + View
Erythranthe guttata Migut.N00541 scaffold_14 + View
Fragaria x ananassa FAN11G1770 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3-4 + View
Fragaria x ananassa FAN25G1575 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3-1 + View
Fragaria x ananassa FAN21G1868 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3-2 - View
Fragaria x ananassa FAN16G2195 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3-3 - View
Fragaria vesca FvH4_3g45800 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3 - View
Helianthus annuus HanXRQChr14g0437191 Probable ruBisCO large subunit-binding protein subunit beta, chloroplastic HanXRQChr14 + View
Lactuca sativa Lsat_1_v5_gn_2_50361 Lsat_1_v8_lg_2 + View
Malus domestica MD03G1002900 TCP-1/cpn60 chaperonin family protein Chr03 + View
Malus domestica MD11G1002700 TCP-1/cpn60 chaperonin family protein Chr11 + View
Manihot esculenta Manes.03G086700 Chromosome03 + View
Manihot esculenta Manes.15G110300 Chromosome15 - View
Olea europaea Oeu060892.1 scaffold856 - View
Punica granatum PGR102G3215 NC_045129.1 - View
Punica granatum PGR119G2340 NC_045132.1 + View
Prunus persica Prupe.6G002500 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Pp06 + View
Populus trichocarpa Potri.003G222400 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Chr03 - View
Populus trichocarpa Potri.001G002500 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Chr01 + View
Rosa chinensis RcHm_v2.0_Chr5g0083881 RcHm_v2.0_Chr5 - View
Salvia bowleyana SalBow3G0279 GWHASIU00000006 + View
Salix brachista Sabra01G0001800 GWHAAZH00000001 + View
Salix brachista Sabra03G0165400 GWHAAZH00000003 - View
Simmondsia chinensis Sc13g0002950 GWHAASQ00000013 - View
Trochodendron aralioides TAR369G0364 group18 - View
Trochodendron aralioides TAR623G0424 group7 + View
Theobroma cacao Thecc.09G203400 TCP-1/cpn60 chaperonin family protein Chromosome_9 - View
Tripterygium wilfordii TWI34G1642 NC_052235.1 - View
Tripterygium wilfordii TWI32G0362 NC_052254.1 - View
Tripterygium wilfordii TWI60G0468 NC_052246.1 + View
Utricularia gibba unitig_62.g23535 unitig_62 + View
Vaccinium macrocarpon vmacro02731 Similar to CPN60-2: Chaperonin CPN60-2, mitochondrial (Cucurbita maxima OX%3D3661) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01025490001 chr6 + View