Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold63G21650 scaffold63 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G8320 LG-7 + View
Acer truncatum Atru.chr11.1776 chr11 - View
Actinidia chinensis Actinidia33202 Lachesis_group12 - View
Arabidopsis lyrata AL1G38880 scaffold_1 + View
Avicennia marina MSTRG.23931 ScioBoG_3895_HRSCAF_3912 - View
Aquilegia oxysepala Aqoxy3G03412 CHR03 + View
Arabidopsis thaliana AT1G26800 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G14200.1)%3B Has 9899 Blast hits to 9869 proteins in 270 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2681%3B Fungi - 828%3B Plants - 5098%3B Viruses - 14%3B Other Eukaryotes - 1278 (source: NCBI BLink). Chr1 - View
Camellia sinensis var. sinensis CSS0049187 zinc finger family protein [Populus trichocarpa] Chr12 - View
Corylus avellana Haze_12003 Similar to MPSR1: E3 ubiquitin-protein ligase MPSR1 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_14518 Similar to MPSR1: E3 ubiquitin-protein ligase MPSR1 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc07_g03450 Putative RING/U-box superfamily protein chr7 + View
Coffea canephora Cc11_g12900 Putative RING/U-box superfamily protein chr11 - View
Citrus clementina Ciclev10032639m.g scaffold_4 + View
Carpinus fangiana Cfa008971 Cfa03 - View
Cardamine hirsuta CARHR025130 RING/U-box superfamily protein Chr1 + View
Carya illinoinensis CiPaw.05G134100 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr05 - View
Citrullus lanatus ClCG09G018180 RING/U-box superfamily protein LENGTH=204 CG_Chr09 - View
Citrullus lanatus ClCG05G024210 RING/U-box superfamily protein LENGTH=204 CG_Chr05 - View
Cucumis melo MELO3C021991.2 E3 ubiquitin-protein ligase RING1-like chr09 - View
Cucumis melo MELO3C012103.2 E3 ubiquitin-protein ligase RING1-like chr10 - View
Capsella rubella Carub.0001s2417 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_1 + View
Cucumis sativus L. CsaV3_5G032780 E3 ubiquitin-protein ligase RING1-like chr5 + View
Davidia involucrata Dinv11520 GWHABJS00000012 + View
Davidia involucrata Dinv16655 GWHABJS00000018 + View
Durio zibethinus Duzib147G1344 NW_019168470.1 - View
Durio zibethinus Duzib268G0080 NW_019168270.1 - View
Durio zibethinus Duzib248G1345 NW_019168048.1 + View
Durio zibethinus Duzib251G0205 NW_019167971.1 - View
Erythranthe guttata Migut.H00930 scaffold_8 + View
Eutrema salsugineum Thhalv10009557m.g PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_5 + View
Eutrema salsugineum Thhalv10009887m.g PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_5 - View
Fragaria x ananassa FAN07G0621 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4-4 + View
Fragaria x ananassa FAN12G0656 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4-3 + View
Fragaria x ananassa FAN22G1269 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4-1 - View
Fragaria x ananassa FAN17G2074 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4-2 + View
Fragaria vesca FvH4_6g48331 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6 - View
Fragaria vesca FvH4_4g31250 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4 - View
Gossypium hirsutum Gohir.A09G015100 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 A09 - View
Gossypium hirsutum Gohir.D09G013600 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 D09 - View
Gossypium hirsutum Gohir.D04G048000 PF13639 - Ring finger domain (zf-RING_2) D04 - View
Gossypium hirsutum Gohir.A05G367100 PF13639 - Ring finger domain (zf-RING_2) A05 + View
Glycine max Glyma.01G048700 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm01 + View
Glycine max Glyma.02G108300 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm02 + View
Gossypium raimondii Gorai.006G015700 Chr06 - View
Gossypium raimondii Gorai.012G053500 Chr12 - View
Helianthus annuus HanXRQChr08g0210911 Probable RING/U-box superfamily protein HanXRQChr08 - View
Lupinus albus Lalb_Chr04g0255991 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr04 + View
Lotus japonicus Lj2g0016541 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED chr2 + View
Lonicera japonica Lj6P786T60 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_8_52720 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 - View
Malus domestica MD13G1071200 RING/U-box superfamily protein Chr13 - View
Malus domestica MD09G1052200 RING/U-box superfamily protein Chr09 + View
Malus domestica MD16G1071900 RING/U-box superfamily protein Chr16 - View
Manihot esculenta Manes.05G102000 Chromosome05 + View
Manihot esculenta Manes.01G036200 Chromosome01 - View
Manihot esculenta Manes.01G091800 Chromosome01 + View
Medicago truncatula Medtr5g041310 zinc finger, C3HC4 type (RING finger) protein chr5 + View
Oryza sativa ssp. japonica Os07g0631200 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr07 + View
Punica granatum PGR102G0748 NC_045129.1 + View
Prunus persica Prupe.1G275700 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp01 + View
Prunus persica Prupe.3G266500 PF13639 - Ring finger domain (zf-RING_2) Pp03 - View
Papaver somniferum PSO384G3570 NC_039368.1 + View
Populus trichocarpa Potri.010G168300 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr10 - View
Quercus lobata QL02p082432 CM012294 + View
Salix brachista Sabra10G0128100 GWHAAZH00000010 - View
Salix brachista Sabra08G0065000 GWHAAZH00000008 + View
Simmondsia chinensis Sc04g0008050 GWHAASQ00000004 - View
Simmondsia chinensis Sc11g0001970 GWHAASQ00000011 + View
Solanum lycopersicum Solyc05g007895.1 RING/U-box superfamily protein (AHRD V3.3 *-* Q9LJE9_ARATH) SL4.0ch05 - View
Schrenkiella parvula Sp1g21990 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch1-1 + View
Solanum pennellii Sopen05g003750 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400018407 Zinc finger protein ST4.03ch05 + View
Trochodendron aralioides TAR629G2341 group0 - View
Theobroma cacao Thecc.04G083500 RING/U-box superfamily protein Chromosome_4 + View
Theobroma cacao Thecc.02G344800 RING/U-box superfamily protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104805165 E3 ubiquitin-protein ligase RING1-like NW_010961290.1 + View
Tarenaya hassleriana THA.LOC104822911 E3 ubiquitin-protein ligase RDUF1-like NW_010966822.1 - View
Vanilla planifolia HPP92_002358 RING/U-box superfamily protein *** CM028150.1 + View
Vitis vinifera GSVIVG01019972001 chr1 + View