Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold198G41098 scaffold198 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G630 LG-6 + View
Arabidopsis lyrata AL7G36630 scaffold_7 - View
Avicennia marina MSTRG.12161 ScioBoG_17730_HRSCAF_17811 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A7Q6YJ PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0EZ7EA PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT4G17895 ubiquitin-specific protease 20 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 20 (UBP20)%3B FUNCTIONS IN: ubiquitin-specific protease activity%2C ubiquitin thiolesterase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Corylus avellana Haze_08220 Similar to UBP20: Ubiquitin carboxyl-terminal hydrolase 20 (Arabidopsis thaliana OX%3D3702) 4 - View
Carpinus fangiana Cfa012444 Cfa05 + View
Chenopodium quinoa AUR62018709 UBP20: Ubiquitin carboxyl-terminal hydrolase 20 C_Quinoa_Scaffold_1817 - View
Chenopodium quinoa AUR62007296 UBP20: Ubiquitin carboxyl-terminal hydrolase 20 C_Quinoa_Scaffold_1971 + View
Daucus carota DCAR_008266 hypothetical protein DCARv2_Chr2 - View
Durio zibethinus Duzib068G0882 NW_019167838.1 - View
Eutrema salsugineum Thhalv10024586m.g PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE scaffold_1 - View
Gossypium hirsutum Gohir.D03G171800 PTHR24006//PTHR24006:SF451 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE D03 + View
Gossypium raimondii Gorai.003G182400 Chr03 + View
Lupinus albus Lalb_Chr05g0216041 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Lalb_Chr05 - View
Salix brachista Sabra01G0110400 GWHAAZH00000001 - View
Solanum lycopersicum Solyc08g005080.2 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G2XLB4_CAPBA) SL4.0ch08 + View
Schrenkiella parvula Sp7g16220 PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ch7-4 - View
Solanum pennellii Sopen08g001100 Encodes a ubiquitin-specific protease. | ubiquitin-specific protease 20 (UBP20) | FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400017850 Ubiquitin carboxyl-terminal hydrolase ST4.03ch08 - View
Trochodendron aralioides TAR375G1111 group15 + View
Theobroma cacao Thecc.03G227100 Ubiquitin-specific protease 20 Chromosome_3 - View
Vaccinium macrocarpon vmacro00327 Similar to UBP21: Ubiquitin carboxyl-terminal hydrolase 21 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View