Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G22140 LG-1 - View
Acer truncatum Atru.chr8.2511 chr8 + View
Arabidopsis lyrata AL8G36040 scaffold_8 - View
Arabidopsis lyrata AL6G12000 scaffold_6 + View
Avicennia marina MSTRG.26740 ScioBoG_52287_HRSCAF_52434 - View
Avicennia marina MSTRG.10289 ScioBoG_13798_HRSCAF_13862 + View
Arabidopsis thaliana AT5G02750 RING/U-box superfamily protein Encodes an E3 ligase%2C SHOOT GRAVITROPISM9. Modulates the interaction between statoliths and F-Actin in gravity sensing. RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1)%3B Has 8586 Blast hits to 8564 proteins in 268 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2607%3B Fungi - 605%3B Plants - 4117%3B Viruses - 22%3B Other Eukaryotes - 1229 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G59550 zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Protein of unknown function DUF1117 (InterPro:IPR010543)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g32010 ChrC06 + View
Brassica carinata BcaC03g13049 ChrC03 - View
Brassica napus C02p00600 C02 + View
Brassica napus A10p16740 A10 - View
Brassica napus A10p32960 A10 - View
Brassica napus C09p73930 C09 - View
Brassica oleracea BolC9t60128H C9 - View
Brassica oleracea BolC2t07342H C2 + View
Brassica rapa BraA10t45333Z A10 - View
Brassica rapa BraA10t43755Z A10 - View
Brassica rapa BraA02t04727Z A02 + View
Brassica rapa BraA02t05787Z A02 + View
Camellia sinensis var. sinensis CSS0002434 unnamed protein product [Coffea canephora] Chr4 - View
Corylus avellana Haze_20683 Similar to SGR9: E3 ubiquitin-protein ligase SGR9, amyloplastic (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g03320 RING/U-box superfamily protein chr6 + View
Citrus clementina Ciclev10012410m.g scaffold_6 - View
Carpinus fangiana Cfa017471 Cfa07 + View
Cardamine hirsuta CARHR210630 RING/U-box superfamily protein Chr6 - View
Carya illinoinensis CiPaw.09G185100 PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 Chr09 - View
Cucumis melo MELO3C009295.2 E3 ubiquitin-protein ligase SGR9, amyloplastic chr04 - View
Carica papaya Cpa.g.sc114.28 supercontig_114 + View
Capsella rubella Carub.0006s0151 PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 scaffold_6 + View
Cucumis sativus L. CsaV3_3G035280 E3 ubiquitin-protein ligase SGR9, amyloplastic chr3 + View
Daucus carota DCAR_014952 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_015321 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_017743 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv37235 GWHABJS00000021 - View
Durio zibethinus Duzib093G0578 NW_019167937.1 - View
Durio zibethinus Duzib106G0946 NW_019168492.1 - View
Erigeron canadensis ECA233G4487 Conyza_canadensis_scaffold:1 - View
Erythranthe guttata Migut.L01646 scaffold_12 + View
Eutrema salsugineum Thhalv10014308m.g PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 scaffold_2 + View
Eutrema salsugineum Thhalv10013762m.g PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_2 + View
Fragaria vesca FvH4_6g14890 PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 Fvb6 + View
Gossypium hirsutum Gohir.D08G009750 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 D08 - View
Gossypium hirsutum Gohir.D04G116900 PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 D04 - View
Gossypium hirsutum Gohir.A04G077700 PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 A04 - View
Gossypium hirsutum Gohir.A08G000121 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 A08 - View
Glycine max Glyma.10G047200 PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 Gm10 + View
Glycine max Glyma.13G135100 PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 Gm13 + View
Gossypium raimondii Gorai.012G134900 Chr12 + View
Gossypium raimondii Gorai.009G421800 Chr09 - View
Gossypium raimondii Gorai.004G002800 Chr04 - View
Lupinus albus Lalb_Chr06g0171191 PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 Lalb_Chr06 + View
Lupinus albus Lalb_Chr02g0153441 PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 Lalb_Chr02 + View
Lotus japonicus Lj5g0019657 PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 chr5 - View
Lactuca sativa Lsat_1_v5_gn_6_32220 PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 Lsat_1_v8_lg_6 - View
Malus domestica MD12G1130000 RING/U-box superfamily protein Chr12 - View
Malus domestica MD04G1110800 RING/U-box superfamily protein Chr04 + View
Manihot esculenta Manes.09G071600 Chromosome09 - View
Medicago truncatula Medtr1g067260 hypothetical protein chr1 - View
Nicotiana tabacum Nitab4.5_0000202g0330 Unknown Nitab4.5_0000202 + View
Nicotiana tabacum Nitab4.5_0000643g0220 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0000643 + View
Olea europaea Oeu035161.1 chr11 - View
Punica granatum PGR004G2602 NC_045131.1 - View
Pisum sativum Psat6g069240 Ring finger domain chr6LG2 - View
Populus trichocarpa Potri.016G082500 PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 Chr16 + View
Phaseolus vulgaris Phvul.007G161400 PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 Chr07 + View
Quercus lobata QL07p045866 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0468101 RcHm_v2.0_Chr3 + View
Rhododendron simsii RhsimUnG0121000 ctg309 - View
Salix brachista Sabra16G0090300 GWHAAZH00000016 + View
Sechium edule Sed0022305 LG02 + View
Sapria himalayana SHI12606 scaffold11_13529635 - View
Solanum lycopersicum Solyc10g084430.2 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1Q288_ARTAN) SL4.0ch10 - View
Solanum lycopersicum Solyc09g007060.2 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1Q288_ARTAN) SL4.0ch09 + View
Schrenkiella parvula Sp6g39830 PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 ch6-6 - View
Schrenkiella parvula Sp6g21250 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch6-6 - View
Solanum pennellii Sopen09g001920 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch09 + View
Solanum pennellii Sopen10g033870 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG402002024 Zinc finger protein ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400011052 Zinc finger protein ST4.03ch10 + View
Trochodendron aralioides TAR623G1174 group7 - View
Theobroma cacao Thecc.05G050400 RING/U-box superfamily protein Chromosome_5 + View
Tarenaya hassleriana THA.LOC104826993 E3 ubiquitin-protein ligase SGR9%2C amyloplastic-like NW_010967707.1 - View
Tarenaya hassleriana THA.LOC104816301 E3 ubiquitin-protein ligase SGR9%2C amyloplastic-like isoform X2 NW_010965775.1 + View
Tripterygium wilfordii TWI53G1873 NC_052244.1 - View