Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold452G51822 scaffold452 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G21820 LG-1 - View
Aethionema arabicum Aa31LG3G2270 LG-3 + View
Actinidia chinensis Actinidia13077 Lachesis_group0 + View
Arabidopsis lyrata AL6G12610 scaffold_6 + View
Arabidopsis lyrata AL3G21040 scaffold_3 + View
Avicennia marina MSTRG.10314 ScioBoG_13798_HRSCAF_13862 + View
Arabidopsis thaliana AT5G03290 isocitrate dehydrogenase V Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. isocitrate dehydrogenase V (IDH-V)%3B FUNCTIONS IN: isocitrate dehydrogenase (NAD+) activity%2C zinc ion binding%2C ATP binding%3B INVOLVED IN: isocitrate metabolic process%2C tricarboxylic acid cycle%2C metabolic process%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804)%2C Isocitrate dehydrogenase NAD-dependent%2C mitochondrial (InterPro:IPR004434)%2C Isocitrate/isopropylmalate dehydrogenase%2C conserved site (InterPro:IPR019818)%3B BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase VI (TAIR:AT3G09810.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G09810 isocitrate dehydrogenase VI Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase isocitrate dehydrogenase VI (IDH-VI)%3B CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804)%2C Isocitrate dehydrogenase NAD-dependent%2C mitochondrial (InterPro:IPR004434)%2C Isocitrate/isopropylmalate dehydrogenase%2C conserved site (InterPro:IPR019818)%3B BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase V (TAIR:AT5G03290.1)%3B Has 17175 Blast hits to 17053 proteins in 2733 species: Archae - 398%3B Bacteria - 9669%3B Metazoa - 935%3B Fungi - 952%3B Plants - 360%3B Viruses - 0%3B Other Eukaryotes - 4861 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC06g32049 ChrC06 + View
Brassica napus C09p73490 C09 - View
Brassica napus A03p01100 A03 + View
Brassica napus A05p39310 A05 - View
Brassica napus A10p32650 A10 - View
Brassica napus C03p01410 C03 + View
Brassica napus C02p00930 C02 + View
Brassica napus C05p58310 C05 - View
Brassica oleracea BolC2t06092H C2 + View
Brassica oleracea BolC3t12699H C3 + View
Brassica oleracea BolC5t34484H C5 - View
Brassica oleracea BolC9t60080H C9 - View
Brassica rapa BraA10t45301Z A10 - View
Brassica rapa BraA03t09492Z A03 + View
Brassica rapa BraA02t04752Z A02 + View
Brassica rapa BraA05t22713Z A05 - View
Camellia sinensis var. sinensis CSS0050197 hypothetical protein MIMGU_mgv1a008537mg [Erythranthe guttata] Chr4 - View
Cicer arietinum L. Ca_11484_v3 Ca_LG4_v3 + View
Coffea canephora Cc06_g04000 3-isopropylmalate dehydrogenase, chloroplastic chr6 + View
Citrus clementina Ciclev10011936m.g scaffold_6 - View
Cardamine hirsuta CARHR084260 3-isopropylmalate dehydrogenase Chr3 + View
Cardamine hirsuta CARHR210050 3-isopropylmalate dehydrogenase Chr6 - View
Carya illinoinensis CiPaw.09G174300 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Chr09 - View
Capsella rubella Carub.0006s0210 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase scaffold_6 + View
Daucus carota DCAR_009300 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv35766 GWHABJS00000015 + View
Davidia involucrata Dinv37297 GWHABJS00000021 - View
Durio zibethinus Duzib106G1925 NW_019168492.1 - View
Durio zibethinus Duzib093G0217 NW_019167937.1 - View
Durio zibethinus Duzib128G0686 NW_019168481.1 - View
Erigeron canadensis ECA248G2867 Conyza_canadensis_scaffold:9 + View
Erythranthe guttata Migut.L01686 scaffold_12 + View
Erythranthe guttata Migut.J00543 scaffold_10 + View
Eutrema salsugineum Thhalv10013851m.g 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase scaffold_2 + View
Eutrema salsugineum Thhalv10020958m.g 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase scaffold_13 - View
Fragaria x ananassa FAN02G4528 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Fvb6-4 + View
Fragaria x ananassa FAN05G4680 K00030 - isocitrate dehydrogenase (NAD+) (IDH3) Fvb6-3 - View
Gossypium hirsutum Gohir.D09G144600 K00030 - isocitrate dehydrogenase (NAD+) (IDH3) D09 - View
Gossypium hirsutum Gohir.A09G148800 K00030 - isocitrate dehydrogenase (NAD+) (IDH3) A09 - View
Gossypium raimondii Gorai.006G165900 Chr06 - View
Helianthus annuus HanXRQChr11g0350191 Probable isocitrate dehydrogenase VI HanXRQChr11 + View
Hydrangea macrophylla Hma1.2p1_0205F.1_g087320 Hma1.2p1_0205F.1 - View
Lupinus albus Lalb_Chr06g0171611 1.1.1.41//1.1.1.85 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase // 3-isopropylmalate dehydrogenase / IMDH Lalb_Chr06 + View
Lupinus albus Lalb_Chr21g0314921 K00030 - isocitrate dehydrogenase (NAD+) (IDH3) Lalb_Chr21 + View
Lonicera japonica Lj3A983G63 GWHAAZE00000003 + View
Lonicera japonica Lj2A114G37 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_1_53221 K00030 - isocitrate dehydrogenase (NAD+) (IDH3) Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_6_31160 Lsat_1_v8_lg_6 - View
Malus domestica MD12G1116100 isocitrate dehydrogenase V Chr12 - View
Malus domestica MD04G1096100 isocitrate dehydrogenase V Chr04 - View
Manihot esculenta Manes.08G008500 Chromosome08 + View
Manihot esculenta Manes.09G063800 Chromosome09 - View
Punica granatum PGR142G0609 NC_045128.1 + View
Prunus persica Prupe.6G235200 K00030 - isocitrate dehydrogenase (NAD+) (IDH3) Pp06 - View
Populus trichocarpa Potri.006G126700 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Chr06 - View
Quercus lobata QL07p044122 7 - View
Rhododendron simsii Rhsim05G0179700 chr05 - View
Salvia bowleyana SalBow5G2939 GWHASIU00000003 - View
Salvia bowleyana SalBow5G4236 GWHASIU00000003 - View
Salix brachista Sabra16G0096500 GWHAAZH00000016 + View
Salix brachista Sabra06G0099800 GWHAAZH00000006 - View
Simmondsia chinensis Sc02g0001750 GWHAASQ00000002 - View
Sechium edule Sed0028020 LG14 - View
Sechium edule Sed0003213 LG10 - View
Sechium edule Sed0011810 LG03 + View
Schrenkiella parvula Sp3g08140 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase ch3-1 + View
Schrenkiella parvula Sp6g39450 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase ch6-6 - View
Tarenaya hassleriana THA.LOC104816340 isocitrate dehydrogenase [NAD] catalytic subunit 5%2C mitochondrial NW_010965775.1 + View
Tripterygium wilfordii TWI74G0832 NC_052234.1 + View
Vitis vinifera GSVIVG01025704001 chr8 - View