Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold90G27671 scaffold90 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G4390 LG-10 + View
Aethionema arabicum Aa31LG8G5960 LG-8 - View
Acer truncatum Atru.chr5.2744 chr5 - View
Actinidia chinensis Actinidia12962 Lachesis_group2 + View
Arabidopsis lyrata AL3G32540 scaffold_3 - View
Arabidopsis lyrata AL1G57020 scaffold_1 - View
Avicennia marina MSTRG.16753 ScioBoG_19743_HRSCAF_19834 + View
Arabidopsis thaliana AT3G19170 presequence protease 1 Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers presequence protease 1 (PREP1)%3B FUNCTIONS IN: metalloendopeptidase activity%3B INVOLVED IN: response to cadmium ion%2C proteolysis%2C protein maturation by peptide bond cleavage%3B LOCATED IN: mitochondrion%2C apoplast%2C chloroplast stroma%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M16%2C C-terminal (InterPro:IPR007863)%2C Peptidase M16C associated (InterPro:IPR013578)%2C Peptidase M16%2C N-terminal (InterPro:IPR011765)%2C Metalloenzyme%2C LuxS/M16 peptidase-like%2C metal-binding (InterPro:IPR011249)%2C Peptidase M16%2C core (InterPro:IPR011237)%3B BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2)%3B Has 4222 Blast hits to 4196 proteins in 1321 species: Archae - 9%3B Bacteria - 2812%3B Metazoa - 224%3B Fungi - 268%3B Plants - 81%3B Viruses - 0%3B Other Eukaryotes - 828 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G49630 presequence protease 2 Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed in flower%2C leaf and root. Not expressed in silique and shoot. presequence protease 2 (PREP2)%3B FUNCTIONS IN: metallopeptidase activity%2C metalloendopeptidase activity%2C zinc ion binding%2C catalytic activity%2C metal ion binding%3B INVOLVED IN: proteolysis%2C protein maturation by peptide bond cleavage%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M16%2C C-terminal (InterPro:IPR007863)%2C Peptidase M16C associated (InterPro:IPR013578)%2C Peptidase M16%2C N-terminal (InterPro:IPR011765)%2C Metalloenzyme%2C LuxS/M16 peptidase-like%2C metal-binding (InterPro:IPR011249)%2C Peptidase M16%2C core (InterPro:IPR011237)%3B BEST Arabidopsis thaliana protein match is: presequence protease 1 (TAIR:AT3G19170.1)%3B Has 3964 Blast hits to 3937 proteins in 1352 species: Archae - 7%3B Bacteria - 2621%3B Metazoa - 205%3B Fungi - 264%3B Plants - 79%3B Viruses - 0%3B Other Eukaryotes - 788 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC01g03642 ChrC01 + View
Brassica carinata BcaB04g19030 ChrB04 - View
Brassica napus C01p44870 C01 + View
Brassica napus A03p41100 A03 - View
Brassica napus A01p35360 A01 + View
Brassica oleracea BolC3t17311H C3 - View
Brassica oleracea BolC1t04455H C1 + View
Brassica rapa BraA03t13267Z A03 - View
Brassica rapa BraA01t03617Z A01 + View
Camellia sinensis var. sinensis CSS0001000 PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like [Sesamum indicum] Chr3 - View
Corylus avellana Haze_01842 Similar to PREP2: Presequence protease 2, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) 1 - View
Citrus clementina Ciclev10027722m.g scaffold_8 - View
Cardamine hirsuta CARHR094570 Presequence protease, mitochondrial Chr3 - View
Cardamine hirsuta CARHR039670 Presequence protease, mitochondrial Chr1 - View
Cucumis melo MELO3C018441.2 presequence protease 1, chloroplastic/mitochondrial-like chr01 + View
Chenopodium quinoa AUR62011441 PREP1: Presequence protease 1, chloroplastic/mitochondrial C_Quinoa_Scaffold_3333 + View
Chenopodium quinoa AUR62016621 PREP1: Presequence protease 1, chloroplastic/mitochondrial C_Quinoa_Scaffold_3670 - View
Capsella rubella Carub.0001s3883 K06972 - uncharacterized protein (K06972) scaffold_1 - View
Capsella rubella Carub.0003s1899 K06972 - uncharacterized protein (K06972) scaffold_3 - View
Daucus carota DCAR_001621 hypothetical protein DCARv2_Chr1 + View
Erigeron canadensis ECA234G3461 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.G01465 Chr07 - View
Erythranthe guttata Migut.B00330 scaffold_2 - View
Eutrema salsugineum Thhalv10019955m.g K06972 - uncharacterized protein (K06972) scaffold_13 + View
Eutrema salsugineum Thhalv10011199m.g K06972 - uncharacterized protein (K06972) scaffold_7 + View
Fragaria x ananassa FAN27G3432 K06972 - uncharacterized protein (K06972) Fvb2-1 + View
Fragaria x ananassa FAN24G2426 PTHR11851:SF68 - PRESEQUENCE PROTEASE 1, CHLOROPLASTIC/MITOCHONDRIAL-RELATED Fvb2-2 + View
Fragaria x ananassa FAN20G0084 K06972 - uncharacterized protein (K06972) Fvb2-3 + View
Fragaria vesca FvH4_2g06380 K06972 - uncharacterized protein (K06972) Fvb2 - View
Gossypium hirsutum Gohir.A04G120800 K06972 - uncharacterized protein (K06972) A04 - View
Gossypium hirsutum Gohir.D04G162300 K06972 - uncharacterized protein (K06972) D04 - View
Gossypium raimondii Gorai.012G150300 Chr12 - View
Lactuca sativa Lsat_1_v5_gn_5_112961 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI06_g04502_MAGBIO AED:0.08 Chr06 + View
Malus domestica MD10G1092200 presequence protease 1 Chr10 + View
Malus domestica MD05G1077600 presequence protease 1 Chr05 + View
Nelumbo nucifera Nn5g30224 chr5 + View
Nicotiana tabacum Nitab4.5_0001899g0100 Metalloenzyme, LuxS/M16 peptidase-like, Peptidase M16 domain, Peptidase M16, C-terminal domain, Peptidase M16C associated, Peptidase M16, N-terminal Nitab4.5_0001899 + View
Olea europaea Oeu007277.1 chr3 - View
Punica granatum PGR042G3302 NC_045130.1 + View
Prunus persica Prupe.8G122100 K06972 - uncharacterized protein (K06972) Pp08 + View
Populus trichocarpa Potri.004G142300 K06972 - uncharacterized protein (K06972) Chr04 - View
Quercus lobata QL11p036227 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0258261 RcHm_v2.0_Chr6 - View
Salvia bowleyana SalBow6G4323 GWHASIU00000002 - View
Salix brachista Sabra04G0094100 GWHAAZH00000004 - View
Sechium edule Sed0020763 LG10 - View
Solanum lycopersicum Solyc01g108600.3 Presequence protease chloroplastic/mitochondrial-like (AHRD V3.3 *** A0A2K3NZI3_TRIPR) SL4.0ch01 + View
Schrenkiella parvula Sp3g17240 K06972 - uncharacterized protein (K06972) ch3-1 - View
Schrenkiella parvula Sp1g36500 K06972 - uncharacterized protein (K06972) ch1-2 - View
Solanum pennellii Sopen01g050820 Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers | presequence protease 1 (PREP1) | CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal , Peptidase M16C associated , Peptidase M16, N-terminal , Metalloenzyme, LuxS/M16 peptidase-like, metal-binding , Peptidase M16, core | BEST Arabidopsis thaliana protein match is: presequence protease 2 ., Peptidase M16C associated Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400025820 ATPREP1 ST4.03ch01 + View
Selenicereus undatus Hund00328 Scaffold_33678 + View
Trochodendron aralioides TAR381G1366 group11 + View
Theobroma cacao Thecc.02G098600 Presequence protease 2 Chromosome_2 + View
Tripterygium wilfordii TWI79G1596 NC_052238.1 - View
Utricularia gibba unitig_21.g20751 unitig_21 + View
Vaccinium macrocarpon vmacro02191 Similar to PREP1: Presequence protease 1, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01031766001 chr3 - View