Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG1G710 | LG-1 | - | View | |
| Acer truncatum | Atru.chr11.1830 | chr11 | + | View | |
| Arabidopsis lyrata | AL1G26220 | scaffold_1 | + | View | |
| Avicennia marina | MSTRG.7816 | ScioBoG_102841_HRSCAF_103114 | + | View | |
| Avicennia marina | MSTRG.13410 | ScioBoG_18778_HRSCAF_18863 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.4P7T15 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | arahy.Tifrunner.gnm1.Arahy.13 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.QWHT6R | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | arahy.Tifrunner.gnm1.Arahy.03 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.DBBB2T | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | arahy.Tifrunner.gnm1.Arahy.15 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.9T6P32 | arahy.Tifrunner.gnm1.Arahy.05 | + | View | |
| Arabidopsis thaliana | AT1G14340 | RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: oxidoreductase activity%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: oxidation reduction%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G01210.1)%3B Has 332 Blast hits to 332 proteins in 76 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 92%3B Plants - 229%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink). | Chr1 | + | View |
| Amborella trichopoda | ATR0564G409 | AmTr_v1.0_scaffold00010 | - | View | |
| Brassica carinata | BcaC05g25331 | ChrC05 | + | View | |
| Brassica napus | C05p12130 | C05 | + | View | |
| Brassica oleracea | BolC5t29965H | C5 | + | View | |
| Brassica rapa | BraA06t24214Z | A06 | + | View | |
| Camellia sinensis var. sinensis | CSS0017870 | PREDICTED: protein vip1-like [Fragaria vesca subsp. vesca] | Chr2 | - | View |
| Camellia sinensis var. sinensis | CSS0021678 | PREDICTED: uncharacterized protein LOC104586769 isoform X2 [Nelumbo nucifera] | Chr12 | + | View |
| Cannabis sativa | CANSAT64G2914 | NC_044379.1 | + | View | |
| Corylus avellana | Haze_14556 | Similar to BPA1: Binding partner of ACD11 1 (Arabidopsis thaliana OX%3D3702) | 5 | + | View |
| Corylus avellana | Haze_12033 | Similar to BPA1: Binding partner of ACD11 1 (Arabidopsis thaliana OX%3D3702) | 9 | + | View |
| Coffea canephora | Cc07_g03230 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr7 | - | View |
| Coffea canephora | Cc11_g13280 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr11 | + | View |
| Citrus clementina | Ciclev10012602m.g | scaffold_6 | + | View | |
| Citrus clementina | Ciclev10032573m.g | scaffold_4 | - | View | |
| Ceratophyllum demersum | CDE09G1329 | 7 | + | View | |
| Carpinus fangiana | Cfa009004 | Cfa03 | + | View | |
| Carpinus fangiana | Cfa007532 | Cfa03 | - | View | |
| Cardamine hirsuta | CARHR014770 | RNA recognition motif containing protein | Chr1 | + | View |
| Carya illinoinensis | CiPaw.05G137700 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Chr05 | + | View |
| Carya illinoinensis | CiPaw.04G018300 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Chr04 | + | View |
| Citrullus lanatus | ClCG05G024440 | RNA recognition motif containing protein | CG_Chr05 | + | View |
| Cucumis melo | MELO3C012080.2 | binding partner of ACD11 1 | chr10 | + | View |
| Capsella rubella | Carub.0001s1402 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | scaffold_1 | + | View |
| Cucumis sativus L. | CsaV3_5G032520 | binding partner of ACD11 1 | chr5 | - | View |
| Daucus carota | DCAR_007142 | hypothetical protein | DCARv2_Chr2 | - | View |
| Davidia involucrata | Dinv33743 | GWHABJS00000014 | - | View | |
| Durio zibethinus | Duzib264G0090 | NW_019167960.1 | - | View | |
| Durio zibethinus | Duzib251G0013 | NW_019167971.1 | + | View | |
| Erigeron canadensis | ECA246G4740 | Conyza_canadensis_scaffold:8 | + | View | |
| Eucalyptus grandis | Eucgr.B03419 | Chr02 | + | View | |
| Erythranthe guttata | Migut.L01317 | scaffold_12 | + | View | |
| Fragaria x ananassa | FAN17G1148 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb4-2 | - | View |
| Fragaria x ananassa | FAN22G1453 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb4-1 | + | View |
| Fragaria x ananassa | FAN12G2841 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb4-3 | - | View |
| Fragaria x ananassa | FAN02G0908 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb6-4 | + | View |
| Fragaria x ananassa | FAN07G1008 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb4-4 | + | View |
| Fragaria x ananassa | FAN05G4881 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb6-3 | - | View |
| Fragaria vesca | FvH4_6g48980 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb6 | + | View |
| Fragaria vesca | FvH4_4g31610 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb4 | + | View |
| Gossypium hirsutum | Gohir.A03G099500 | A03 | - | View | |
| Gossypium hirsutum | Gohir.D02G124400 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | D02 | - | View |
| Glycine max | Glyma.18G258600 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Gm18 | - | View |
| Glycine max | Glyma.02G019000 | PF14259 - RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) | Gm02 | + | View |
| Gossypium raimondii | Gorai.005G139800 | Chr05 | - | View | |
| Lupinus albus | Lalb_Chr10g0098141 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Lalb_Chr10 | - | View |
| Lotus japonicus | Lj1g0009798 | PF14259 - RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) | chr1 | + | View |
| Lotus japonicus | Lj2g0018612 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | chr2 | - | View |
| Lonicera japonica | Lj7A397T30 | GWHAAZE00000007 | + | View | |
| Lonicera japonica | Lj6C792T0 | GWHAAZE00000006 | + | View | |
| Lactuca sativa | Lsat_1_v5_gn_8_52100 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Lsat_1_v8_lg_8 | + | View |
| Magnolia biondii | MBI02_g33380_MAGBIO | AED:0.11 | Chr02 | + | View |
| Malus domestica | MD13G1074500 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr13 | + | View |
| Malus domestica | MD09G1049200 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr09 | - | View |
| Malus domestica | MD16G1075800 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr16 | + | View |
| Manihot esculenta | Manes.01G187800 | Chromosome01 | + | View | |
| Manihot esculenta | Manes.05G099033 | Chromosome05 | - | View | |
| Medicago truncatula | Medtr7g010100 | RNA recognition motif, a.k.a. RRM, RBD protein | chr7 | - | View |
| Medicago truncatula | Medtr5g039130 | RNA recognition motif, a.k.a. RRM, RBD protein | chr5 | - | View |
| Nelumbo nucifera | Nn4g23095 | chr4 | - | View | |
| Nelumbo nucifera | Nn3g17175 | chr3 | - | View | |
| Punica granatum | PGR102G1291 | NC_045129.1 | - | View | |
| Prunus persica | Prupe.1G271600 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Pp01 | - | View |
| Prunus persica | Prupe.3G269600 | Pp03 | + | View | |
| Papaver somniferum | PSO832G1730 | NC_039367.1 | + | View | |
| Papaver somniferum | PSO017G1771 | NC_039362.1 | - | View | |
| Papaver somniferum | PSO063G5991 | NC_039364.1 | - | View | |
| Papaver somniferum | PSO478G3055 | NC_039361.1 | + | View | |
| Phaseolus vulgaris | Phvul.002G088500 | Chr02 | + | View | |
| Quercus lobata | QL03p064856 | 3 | + | View | |
| Quercus lobata | QL02p081468 | CM012294 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr4g0440121 | RcHm_v2.0_Chr4 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr2g0168821 | RcHm_v2.0_Chr2 | + | View | |
| Salvia bowleyana | SalBow1G4234 | GWHASIU00000001 | - | View | |
| Salvia bowleyana | SalBow8G1497 | GWHASIU00000004 | - | View | |
| Sechium edule | Sed0004959 | LG06 | + | View | |
| Solanum lycopersicum | Solyc05g007200.4 | binding partner of ACD11 1 (AHRD V3.3 *** A0A1U8EM00_CAPAN) | SL4.0ch05 | - | View |
| Schrenkiella parvula | Sp1g12690 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | ch1-1 | + | View |
| Solanum pennellii | Sopen05g003160 | RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding | INVOLVED IN: oxidation reduction | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aldo/keto reductase , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein | Spenn-ch05 | - | View |
| Solanum tuberosum | PGSC0003DMG400025609 | RNA recognition motif containing protein | ST4.03ch05 | + | View |
| Trochodendron aralioides | TAR622G1301 | group8 | - | View | |
| Theobroma cacao | Thecc.02G348800 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chromosome_2 | - | View |
| Theobroma cacao | Thecc.04G078700 | Uncharacterized protein | Chromosome_4 | - | View |
| Vitis vinifera | GSVIVG01020030001 | chr1 | - | View | |
| Vitis vinifera | GSVIVG01011379001 | chr14 | - | View |