Gene: Lsat_1_v5_gn_8_52100

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_52100
  • Transcript Identifier Lsat_1_v5_gn_8_52100.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 74472077-74477414 : positive

Gene Family Information

  • ID HOM05D000742
  • #Genes/#Species 786/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_52100.v5
  • pacid 38949830

Descriptions

  • Description PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G01210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G01210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G01210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 Vip1-like, RNA recognition motif, plant
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated