Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold1G00372 scaffold1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G2090 LG-5 + View
Acer truncatum Atru.chr5.1154 chr5 + View
Actinidia chinensis Actinidia21051 Lachesis_group9 - View
Actinidia chinensis Actinidia24827 Lachesis_group15 - View
Arabidopsis lyrata AL6G50630 scaffold_6 - View
Aquilegia oxysepala Aqoxy2G02954 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LF73V2 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UILT17 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G1675E PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT4G02440 F-box family protein EID1 is an F-box protein that functions as a negative regulator in phytochrome A (phyA)-specific light signalling. Expressed at all stages of plant development independently of light conditions%2C localizes to the nucleus%2C and forms nuclear speckles under continuous far-red light. Forms stable dimeric and trimeric complexes with several ASK proteins and Cullin1 in yeast and in planta. EMPFINDLICHER IM DUNKELROTEN LICHT 1 (EID1)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: photoperiodism%2C flowering%2C red%2C far-red light phototransduction%2C leaf development%2C regulation of photomorphogenesis%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 121 Blast hits to 91 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 121%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0796G303 AmTr_v1.0_scaffold00045 - View
Brassica carinata BcaB01g02041 ChrB01 - View
Brassica napus A09p01900 A09 + View
Brassica napus C09p01980 C09 + View
Brassica oleracea BolC9t53130H C9 + View
Brassica rapa BraA09t35841Z A09 + View
Beta vulgaris EL10Ac7g17501 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0029794 unnamed protein product [Coffea canephora] Chr13 - View
Cannabis sativa CANSAT25G0541 NC_044370.1 - View
Cicer arietinum L. Ca_09155_v3 Ca_LG3_v3 - View
Corylus avellana Haze_04922 Similar to EID1: Phytochrome A-associated F-box protein (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g20770 Phytochrome A-associated F-box protein chr1 - View
Citrus clementina Ciclev10021114m.g scaffold_3 - View
Carpinus fangiana Cfa005921 Cfa02 + View
Cardamine hirsuta CARHR250710 Phytochrome A-associated F-box protein, putative Chr8 + View
Carya illinoinensis CiPaw.08G095700 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Chr08 + View
Carya illinoinensis CiPaw.07G108000 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Chr07 - View
Citrullus lanatus ClCG10G010870 Phytochrome A-associated F-box protein, putative CG_Chr10 - View
Cucumis melo MELO3C017961.2 Phytochrome A-associated F-box protein chr07 + View
Corchorus olitorius COL.COLO4_23354 phytochrome A-associated F-box protein-like protein AWUE01018187.1 + View
Chenopodium quinoa AUR62033135 EID1: Phytochrome A-associated F-box protein C_Quinoa_Scaffold_2244 - View
Capsella rubella Carub.0006s3469 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN scaffold_6 - View
Cucumis sativus L. CsaV3_4G000750 phytochrome A-associated F-box protein chr4 - View
Daucus carota DCAR_002826 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv19699 GWHABJS00000007 + View
Davidia involucrata Dinv33051 GWHABJS00000010 - View
Durio zibethinus Duzib133G0671 NW_019167938.1 + View
Durio zibethinus Duzib138G1290 NW_019167893.1 + View
Durio zibethinus Duzib211G0390 NW_019168049.1 + View
Erigeron canadensis ECA236G0211 Conyza_canadensis_scaffold:3 - View
Erythranthe guttata Migut.N01502 scaffold_14 - View
Erythranthe guttata Migut.D00211 scaffold_4 - View
Fragaria x ananassa FAN27G1772 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Fvb2-1 - View
Fragaria x ananassa FAN15G1997 PTHR31348:SF4 - PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Fvb2-4 - View
Fragaria vesca FvH4_2g25611 PTHR31348:SF4 - PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Fvb2 - View
Gossypium hirsutum Gohir.A08G075600 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN A08 - View
Gossypium hirsutum Gohir.D08G085100 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN D08 - View
Gossypium hirsutum Gohir.A12G130800 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN A12 + View
Glycine max Glyma.03G214300 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Gm03 - View
Gossypium raimondii Gorai.004G089600 Chr04 - View
Gossypium raimondii Gorai.008G145600 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0491F.1_g164480 Hma1.2p1_0491F.1 - View
Lupinus albus Lalb_Chr06g0163461 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Lalb_Chr06 - View
Lupinus albus Lalb_Chr18g0047021 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Lalb_Chr18 + View
Lotus japonicus Lj1g0011611 PTHR31348:SF4 - PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN chr1 - View
Lonicera japonica Lj2P1193T28 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_8_53521 PTHR31348:SF4 - PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Lsat_1_v8_lg_8 + View
Magnolia biondii MBI19_g25350_MAGBIO AED:0.01 Chr19 + View
Malus domestica MD11G1310800 F-box family protein Chr11 + View
Malus domestica MD03G1287400 F-box family protein Chr03 - View
Manihot esculenta Manes.05G062500 Chromosome05 + View
Medicago truncatula Medtr7g108820 phytochrome A-associated F-box protein, putative chr7 - View
Nelumbo nucifera Nn3g21470 chr3 - View
Nicotiana tabacum Nitab4.5_0001879g0020 F-box domain Nitab4.5_0001879 - View
Olea europaea Oeu046686.1 chr16 + View
Olea europaea Oeu011455.1 scaffold1435 - View
Petunia axillaris Peaxi162Scf00001g00452 Phytochrome A-associated F-box protein Peaxi162Scf00001 + View
Punica granatum PGR119G1100 NC_045132.1 + View
Prunus persica Prupe.8G260500 PTHR31348:SF4 - PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Pp08 - View
Papaver somniferum PSO170G2082 NC_039360.1 + View
Populus trichocarpa Potri.014G130000 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Chr14 + View
Populus trichocarpa Potri.002G205150 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Chr02 + View
Phaseolus vulgaris Phvul.001G207000 PTHR31348:SF4 - PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN Chr01 - View
Quercus lobata QL12p028562 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0293871 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim01G0284600 chr01 - View
Salvia bowleyana SalBow3G0280 GWHASIU00000006 - View
Salix brachista Sabra02G0154200 GWHAAZH00000002 - View
Salix brachista Sabra14G0096600 GWHAAZH00000014 + View
Sechium edule Sed0022873 LG06 + View
Sechium edule Sed0014780 LG05 - View
Solanum lycopersicum Solyc09g075080.3 Phytochrome A-associated F-box protein (AHRD V3.3 *** A0A2G2W0F9_CAPBA) SL4.0ch09 - View
Schrenkiella parvula Sp6g02350 PTHR31348//PTHR31348:SF4 - FAMILY NOT NAMED // PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN ch6-1 + View
Solanum pennellii Sopen09g029900 EID1 is an F-box protein that functions as a negative regulator in phytochrome A (phyA)-specific light signalling. Expressed at all stages of plant development independently of light conditions, localizes to the nucleus, and forms nuclear speckles under continuous far-red light. Forms stable dimeric and trimeric complexes with several ASK proteins and Cullin1 in yeast and in planta. | EMPFINDLICHER IM DUNKELROTEN LICHT 1 (EID1) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: photoperiodism, flowering, red, far-red light phototransduction, leaf development, regulation of photomorphogenesis | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400011401 Phytochrome A-associated F-box protein ST4.03ch09 - View
Trochodendron aralioides TAR365G0052 group16 + View
Theobroma cacao Thecc.01G299500 F-box family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC109115977 phytochrome A-associated F-box protein NW_010969548.1 - View
Trifolium pratense TPR.G9640 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI23G0499 NC_052239.1 + View
Utricularia gibba unitig_0.g662 unitig_0 - View
Vigna mungo VMungo1383G2661 CM024070.1 - View
Vigna mungo VMungo0720G2164 CM024071.1 + View