Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.2374 chr13 - View
Arabidopsis lyrata AL2G31840 scaffold_2 + View
Arabidopsis lyrata AL1G36050 scaffold_1 - View
Avicennia marina MSTRG.1570 ScioBoG_102833_HRSCAF_103052 + View
Avicennia marina MSTRG.25476 ScioBoG_4119_HRSCAF_4138 + View
Amaranthus hybridus Ah.05g178590 E3 ubiquitin-protein ligase RNF170 (EC 2.3.2.27) (RING finger protein 170) (RING-type E3 ubiquitin transferase RNF170) AmaHy_arrow1_Scaffold_5 + View
Arabidopsis thaliana AT1G72175 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1232 (InterPro:IPR010652)%2C Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G22510.1)%3B Has 671 Blast hits to 671 proteins in 108 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 504%3B Fungi - 36%3B Plants - 67%3B Viruses - 2%3B Other Eukaryotes - 54 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G22510 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) FUNCTIONS IN: zinc ion binding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1232 (InterPro:IPR010652)%2C Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1)%3B Has 639 Blast hits to 639 proteins in 126 species: Archae - 0%3B Bacteria - 17%3B Metazoa - 440%3B Fungi - 43%3B Plants - 76%3B Viruses - 2%3B Other Eukaryotes - 61 (source: NCBI BLink). RING/U-box protein with domain of unknown function (DUF 1232)%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1232 (InterPro:IPR010652)%3B BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1). Chr1 - View
Brassica carinata BcaB03g14961 ChrB03 + View
Brassica napus A07p38290 A07 + View
Brassica napus C06p46350 C06 + View
Brassica oleracea BolC6t39680H C6 + View
Brassica rapa BraA07t31393Z A07 + View
Coffea canephora Cc10_g09520 Putative RING finger protein 170 chr10 - View
Cardamine hirsuta CARHR022860 RING finger protein Chr1 - View
Cardamine hirsuta CARHR065030 RING finger protein Chr2 + View
Chenopodium quinoa AUR62023545 rnf170: E3 ubiquitin-protein ligase RNF170 C_Quinoa_Scaffold_1606 + View
Chenopodium quinoa AUR62004599 rnf170: E3 ubiquitin-protein ligase RNF170 C_Quinoa_Scaffold_4250 - View
Capsella rubella Carub.0001s2204 K15707 - RING finger protein 170 (RNF170) scaffold_1 - View
Capsella rubella Carub.0002s1898 K15707 - RING finger protein 170 (RNF170) scaffold_2 + View
Erythranthe guttata Migut.C01326 scaffold_3 + View
Gossypium raimondii Gorai.009G265000 Chr09 - View
Lactuca sativa Lsat_1_v5_gn_1_25761 Lsat_1_v8_lg_1 - View
Malus domestica MD08G1217700 RING/U-box protein with domain of unknown function (DUF 1232) Chr08 - View
Manihot esculenta Manes.18G106200 Chromosome18 - View
Olea europaea Oeu006595.1 scaffold124 + View
Petunia axillaris Peaxi162Scf00688g00428 RING/U-box superfamily protein Peaxi162Scf00688 - View
Populus trichocarpa Potri.013G105400 PF06803 - Protein of unknown function (DUF1232) (DUF1232) Chr13 - View
Schrenkiella parvula Sp5g27260 K15707 - RING finger protein 170 (RNF170) ch5-6 + View
Solanum tuberosum PGSC0003DMG400026730 Zinc finger family protein ST4.03ch11 + View
Trochodendron aralioides TAR628G0883 group5 + View
Utricularia gibba unitig_37.g13102 unitig_37 - View