Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold11G05817 scaffold11 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.441 chr13 + View
Actinidia chinensis Actinidia15345 Lachesis_group26 + View
Actinidia chinensis Actinidia22528 Lachesis_group28 + View
Actinidia chinensis Actinidia37999 Lachesis_group7 + View
Avicennia marina MSTRG.22305 ScioBoG_3008_HRSCAF_3015 - View
Avicennia marina MSTRG.1265 ScioBoG_102833_HRSCAF_103052 + View
Aquilegia oxysepala Aqoxy5G01588 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P4XZCB K02725 - 20S proteasome subunit alpha 6 (PSMA1) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LWQV1C K02725 - 20S proteasome subunit alpha 6 (PSMA1) arahy.Tifrunner.gnm1.Arahy.06 - View
Camellia sinensis var. sinensis CSS0046824 PREDICTED: proteasome subunit alpha type-1-B-like [Solanum tuberosum] Chr9 + View
Camellia sinensis var. sinensis CSS0039888 PREDICTED: proteasome subunit alpha type-1-B [Sesamum indicum] Chr4 + View
Capsicum annuum CAN.G1226.42 PGAv.1.6.scaffold1226 - View
Cannabis sativa CANSAT25G0548 NC_044370.1 - View
Cicer arietinum L. Ca_13359_v3 Ca_LG4_v3 + View
Corylus avellana Haze_17936 Similar to PAF2: Proteasome subunit alpha type-1-B (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc10_g02620 Proteasome subunit alpha type-1-B chr10 + View
Citrus clementina Ciclev10002110m.g scaffold_5 - View
Carpinus fangiana Cfa018182 Cfa07 - View
Carya illinoinensis CiPaw.15G081600 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Chr15 - View
Citrullus lanatus ClCG08G014860 Proteasome subunit alpha type CG_Chr08 + View
Cucumis melo MELO3C010960.2 Proteasome subunit alpha type chr03 + View
Corchorus olitorius COL.COLO4_26280 hypothetical protein AWUE01019228.1 + View
Cucumis sativus L. CsaV3_2G028900 Proteasome subunit alpha type chr2 - View
Daucus carota DCAR_022475 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv39439 GWHABJS00000011 - View
Davidia involucrata Dinv36105 GWHABJS00000002 - View
Durio zibethinus Duzib041G0309 NW_019167826.1 + View
Durio zibethinus Duzib093G1628 NW_019167937.1 - View
Durio zibethinus Duzib116G0719 NW_019167949.1 + View
Erigeron canadensis ECA232G2769 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.F01586 Chr06 - View
Erythranthe guttata Migut.C00752 scaffold_3 - View
Fragaria x ananassa FAN20G0466 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Fvb2-3 - View
Fragaria x ananassa FAN15G3433 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Fvb2-4 + View
Fragaria x ananassa FAN27G0463 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Fvb2-1 + View
Fragaria vesca FvH4_2g39570 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Fvb2 + View
Gossypium hirsutum Gohir.A06G009000 K02725 - 20S proteasome subunit alpha 6 (PSMA1) A06 + View
Gossypium hirsutum Gohir.D06G004500 K02725 - 20S proteasome subunit alpha 6 (PSMA1) D06 + View
Glycine max Glyma.17G252100 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Gm17 - View
Glycine max Glyma.14G073000 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Gm14 + View
Gossypium raimondii Gorai.010G009100 Chr10 + View
Helianthus annuus HanXRQChr16g0501521 Probable proteasome alpha subunit F1 HanXRQChr16 + View
Helianthus annuus HanXRQChr09g0269001 Probable proteasome subunit alpha type-1 HanXRQChr09 + View
Lupinus albus Lalb_Chr22g0354681 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Lalb_Chr22 + View
Lotus japonicus Lj5g0000748 K02725 - 20S proteasome subunit alpha 6 (PSMA1) chr5 - View
Lonicera japonica Lj4A788G55 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_4_117781 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Lsat_1_v8_lg_4 + View
Magnolia biondii MBI10_g06733_MAGBIO AED:0.03 Chr10 - View
Malus domestica MD08G1028900 20S proteasome alpha subunit F2 Chr08 + View
Manihot esculenta Manes.18G022500 Chromosome18 + View
Manihot esculenta Manes.05G157400 Chromosome05 + View
Medicago truncatula Medtr1g022410 20S proteasome subunit alpha type 1 chr1 - View
Nelumbo nucifera Nn5g29656 chr5 - View
Nicotiana tabacum Nitab4.5_0003265g0090 Proteasome, alpha-subunit, N-terminal domain, Proteasome, subunit alpha/beta, Proteasome A-type subunit Nitab4.5_0003265 + View
Petunia axillaris Peaxi162Scf00140g00018 Pentatricopeptide repeat-containing protein Peaxi162Scf00140 - View
Punica granatum PGR083G0234 NC_045133.1 + View
Prunus persica Prupe.1G376700 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Pp01 + View
Populus trichocarpa Potri.005G229200 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Chr05 - View
Populus trichocarpa Potri.002G033900 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Chr02 + View
Phaseolus vulgaris Phvul.001G013000 K02725 - 20S proteasome subunit alpha 6 (PSMA1) Chr01 + View
Rosa chinensis RcHm_v2.0_Chr6g0301351 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim06G0030800 chr06 + View
Salvia bowleyana SalBow7G3764 GWHASIU00000005 + View
Salix brachista Sabra05G0177100 GWHAAZH00000005 - View
Salix brachista Sabra02G0027200 GWHAAZH00000002 + View
Simmondsia chinensis Sc02g0005930 GWHAASQ00000002 + View
Sechium edule Sed0012133 LG11 - View
Solanum lycopersicum Solyc04g080590.4 Proteasome subunit alpha type (AHRD V3.3 *** A0A2G2ZSB0_CAPAN) SL4.0ch04 - View
Solanum pennellii Sopen04g034180 encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance. | proteasome alpha subunit F1 (PAF1) | FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity | INVOLVED IN: response to arsenic, protein catabolic process, ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome core complex, proteasome complex, plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site , Proteasome, subunit alpha/beta | BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit F2 Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400003740 Proteasome subunit alpha type ST4.03ch04 - View
Trochodendron aralioides TAR381G1175 group11 + View
Trochodendron aralioides TAR376G0460 group14 - View
Trochodendron aralioides TAR628G0879 group5 - View
Theobroma cacao Thecc.08G030100 20S proteasome alpha subunit F2 Chromosome_8 - View
Trifolium pratense TPR.G25332 Tp57577_TGAC_v2_LG1 - View
Trifolium pratense TPR.G20162 Tp57577_TGAC_v2_scaf_312 + View
Tripterygium wilfordii TWI36G0782 NC_052237.1 - View
Tripterygium wilfordii TWI12G0517 NC_052243.1 + View
Vaccinium macrocarpon vmacro21660 Similar to PAF1: Proteasome subunit alpha type-1-A (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G0747 CM024073.1 + View
Vitis vinifera GSVIVG01009737001 chr18 - View