Gene: Solyc04g080590.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g080590.4
- Transcript Identifier Solyc04g080590.4.1
- Gene Type Coding gene
- Location SL4.0ch04 : 62677947-62681906 : negative
Gene Family Information
- ID HOM05D000276
- #Genes/#Species 1584/100
- Phylogenetic origin
- ID ORTHO05D004241
- #Genes/#Species 186/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc04g080590.4.1
- uniprot A0A3Q7GA27
- gene_id Solyc04g080590
Descriptions
- Description Proteasome subunit alpha type (AHRD V3.3 *** A0A2G2ZSB0_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046685 | ISO | PLAZA Integrative Orthology | response to arsenic-containing substance | AT5G42790 |
| GO:0010498 | IBA | GOA Database | proteasomal protein catabolic process | |
| GO:0006511 | IEA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0051603 | IEA | GOA Database | proteolysis involved in cellular protein catabolic process | |
| GO:0051603 | IEA | InterPro | proteolysis involved in cellular protein catabolic process |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005839 | IBA IEA | GOA Database | proteasome core complex | |
| GO:0005839 | IEA | InterPro | proteasome core complex | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G47250 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G47250 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G47250 |
| GO:0019773 | IBA IEA | GOA Database | proteasome core complex, alpha-subunit complex | |
| GO:0019773 | IEA | InterPro | proteasome core complex, alpha-subunit complex | |
| GO:0000502 | IEA | GOA Database | proteasome complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.5.1.1.6 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-6 |