Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold17G07931 scaffold17 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G20330 LG-2 + View
Aethionema arabicum Aa31LG3G13270 LG-3 - View
Acer truncatum Atru.chr7.597 chr7 - View
Actinidia chinensis Actinidia38631 Lachesis_group8 - View
Arabidopsis lyrata AL7G21950 scaffold_7 + View
Arabidopsis lyrata AL8G33360 scaffold_8 - View
Avicennia marina MSTRG.26217 ScioBoG_52287_HRSCAF_52434 - View
Avicennia marina MSTRG.6225 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.10740 ScioBoG_13798_HRSCAF_13862 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7U0T6N PTHR21736//PTHR21736:SF13//PTHR31262//PTHR31262:SF0 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.53KNFG PTHR21736//PTHR21736:SF13//PTHR31262//PTHR31262:SF0 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT4G30200 vernalization5/VIN3-like protein Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus. vernalization5/VIN3-like (VEL1)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423%2C plant (InterPro:IPR004082)%2C Fibronectin%2C type III-like fold (InterPro:IPR008957)%2C Fibronectin%2C type III (InterPro:IPR003961)%3B BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1)%3B Has 270 Blast hits to 250 proteins in 39 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 8%3B Fungi - 14%3B Plants - 239%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink). vernalization5/VIN3-like (VEL1)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423%2C plant (InterPro:IPR004082)%2C Fibronectin%2C type III-like fold (InterPro:IPR008957)%2C Fibronectin%2C type III (InterPro:IPR003961)%3B BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1)%3B Has 283 Blast hits to 258 proteins in 40 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 3%3B Fungi - 23%3B Plants - 240%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0580G281 AmTr_v1.0_scaffold00019 + View
Brassica carinata BcaNung00529 Contig281 - View
Brassica carinata BcaC09g51802 ChrC09 - View
Brassica napus C07p57620 C07 - View
Brassica napus A01p07930 A01 + View
Brassica napus C03p15020 C03 + View
Brassica napus A03p59590 A03 - View
Brassica napus C01p08860 C01 + View
Brassica oleracea BolC1t00876H C1 + View
Brassica oleracea BolC7t46227H C7 - View
Brassica oleracea BolC2t07554H C2 + View
Brassica rapa BraA01t00739Z A01 + View
Brassica rapa BraA03t15017Z A03 - View
Camellia sinensis var. sinensis CSS0038876 PREDICTED: VIN3-like protein 2 [Vitis vinifera] Chr4 - View
Cannabis sativa CANSAT11G0296 NC_044377.1 - View
Coffea canephora Cc06_g13170 Putative Protein VERNALIZATION INSENSITIVE 3 chr6 - View
Citrus clementina Ciclev10007562m.g scaffold_1 - View
Carpinus fangiana Cfa013497 Cfa05 - View
Cardamine hirsuta CARHR271180 Protein VERNALIZATION insensitive 3 Chr8 - View
Cardamine hirsuta CARHR238110 Protein VERNALIZATION INSENSITIVE Chr7 - View
Carya illinoinensis CiPaw.08G035600 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr08 - View
Carya illinoinensis CiPaw.07G192900 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr07 + View
Citrullus lanatus ClCG06G013420 Protein VERNALIZATION INSENSITIVE CG_Chr06 - View
Cucumis melo MELO3C017455.2 VIN3-like protein 2 chr02 + View
Capsella rubella Carub.0008s1790 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED scaffold_8 - View
Capsella rubella Carub.0007s1041 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_1G031670 VIN3-like protein 2 chr1 + View
Daucus carota DCAR_014697 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv41240 GWHABJS00000013 - View
Davidia involucrata Dinv43386 GWHABJS00000085 + View
Durio zibethinus Duzib150G1038 NW_019167882.1 + View
Durio zibethinus Duzib168G1905 NW_019168159.1 - View
Durio zibethinus Duzib170G0637 NW_019167871.1 + View
Eucalyptus grandis Eucgr.C00151 Chr03 - View
Erythranthe guttata Migut.J01491 scaffold_10 + View
Erythranthe guttata Migut.K00239 scaffold_11 - View
Eutrema salsugineum Thhalv10012995m.g PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10024549m.g scaffold_1 + View
Gossypium hirsutum Gohir.A05G004280 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED A05 - View
Gossypium hirsutum Gohir.D05G005000 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED D05 - View
Glycine max Glyma.17G062500 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Gm17 - View
Glycine max Glyma.13G097000 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Gm13 + View
Gossypium raimondii Gorai.009G004900 Chr09 - View
Lupinus albus Lalb_Chr13g0300181 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Lalb_Chr13 - View
Lupinus albus Lalb_Chr07g0180531 PTHR21736//PTHR21736:SF13 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Lalb_Chr07 + View
Lactuca sativa Lsat_1_v5_gn_7_53761 Lsat_1_v8_lg_7 + View
Malus domestica MD16G1256500 vernalization5/VIN3-like Chr16 - View
Malus domestica MD13G1252500 vernalization5/VIN3-like Chr13 - View
Manihot esculenta Manes.06G023300 Chromosome06 + View
Populus trichocarpa Potri.018G091500 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr18 - View
Populus trichocarpa Potri.006G167800 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr06 + View
Phaseolus vulgaris Phvul.003G144400 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr03 - View
Quercus lobata QL02p097917 CM012294 + View
Rhododendron simsii Rhsim03G0264800 chr03 + View
Rhododendron simsii Rhsim01G0003800 chr01 - View
Salvia bowleyana SalBow1G7903 GWHASIU00000001 + View
Salix brachista Sabra18G0078600 GWHAAZH00000018 - View
Salix brachista Sabra06G0128500 GWHAAZH00000006 - View
Sechium edule Sed0011605 LG12 - View
Sechium edule Sed0000775 LG08 + View
Schrenkiella parvula Sp7g28080 PTHR21736//PTHR21736:SF13 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED ch7-5 - View
Schrenkiella parvula Sp6g19100 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED ch6-6 - View
Selenicereus undatus Hund09031 Scaffold_33676 - View
Trochodendron aralioides TAR636G3612 group1 - View
Trochodendron aralioides TAR383G0811 group10 + View
Tarenaya hassleriana THA.LOC104803940 VIN3-like protein 2 isoform X2 NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104803491 VIN3-like protein 2 NW_010971389.1 - View
Tripterygium wilfordii TWI32G0091 NC_052254.1 + View
Tripterygium wilfordii TWI34G0864 NC_052235.1 - View
Vaccinium macrocarpon vmacro06010 Similar to VIL2: VIN3-like protein 2 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13128 Similar to VIL2: VIN3-like protein 2 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2198 CM024074.1 + View
Vitis vinifera GSVIVG01029220001 chr11 - View