Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold340G49313 scaffold340 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G2480 LG-2 - View
Arabidopsis lyrata AL2G22160 scaffold_2 - View
Avicennia marina MSTRG.340 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.8191 ScioBoG_102841_HRSCAF_103114 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VEFL47 K10750 - chromatin assembly factor 1 subunit A (CHAF1A) arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT1G65470 chromatin assembly factor-1 (FASCIATA1) (FAS1) Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis%2C the three CAF-1 subunits are encoded by FAS1%2C FAS2 and%2C most likely%2C MSI1%2C respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. FASCIATA 1 (FAS1)%3B CONTAINS InterPro DOMAIN/s: Chromatin assembly factor 1 subunit A (InterPro:IPR022043)%3B Has 59418 Blast hits to 36461 proteins in 1994 species: Archae - 284%3B Bacteria - 7518%3B Metazoa - 24571%3B Fungi - 4236%3B Plants - 1982%3B Viruses - 348%3B Other Eukaryotes - 20479 (source: NCBI BLink). Chr1 - View
Beta vulgaris EL10Ac4g10026 K10750 - chromatin assembly factor 1 subunit A (CHAF1A) Chr4_EL10_PGA_scaffold1 + View
Cannabis sativa CANSAT64G2413 NC_044379.1 - View
Cicer arietinum L. Ca_08015_v3 Ca_LG3_v3 - View
Corylus avellana Haze_04608 Similar to FAS1: Chromatin assembly factor 1 subunit FAS1 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc09_g04110 Putative chromatin assembly factor-1 (FASCIATA1) (FAS1) chr9 + View
Cardamine hirsuta CARHR057120 Chromatin assembly factor-1 Chr2 - View
Chenopodium quinoa AUR62000270 FAS1: Chromatin assembly factor 1 subunit FAS1 C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62006618 FAS1: Chromatin assembly factor 1 subunit FAS1 C_Quinoa_Scaffold_3429 - View
Capsella rubella Carub.0002s1120 K10750 - chromatin assembly factor 1 subunit A (CHAF1A) scaffold_2 - View
Davidia involucrata Dinv29076 GWHABJS00000004 - View
Davidia involucrata Dinv17130 GWHABJS00000009 - View
Eucalyptus grandis Eucgr.B01457 Chr02 + View
Erythranthe guttata Migut.F01842 scaffold_6 - View
Eutrema salsugineum Thhalv10018127m.g K10750 - chromatin assembly factor 1 subunit A (CHAF1A) scaffold_9 + View
Fragaria x ananassa FAN02G1917 KOG4364 - Chromatin assembly factor-I Fvb6-4 - View
Fragaria vesca FvH4_6g00081 K10750 - chromatin assembly factor 1 subunit A (CHAF1A) Fvb6 - View
Glycine max Glyma.09G248000 K10750 - chromatin assembly factor 1 subunit A (CHAF1A) Gm09 + View
Malus domestica MD12G1261700 chromatin assembly factor-1 (FASCIATA1) (FAS1) Chr12 - View
Manihot esculenta Manes.13G000700 Chromosome13 - View
Olea europaea Oeu001220.3 chr13 + View
Olea europaea Oeu034710.1 scaffold293 + View
Punica granatum PGR031G3878 NC_045127.1 - View
Prunus persica Prupe.6G365000 K10750 - chromatin assembly factor 1 subunit A (CHAF1A) Pp06 + View
Pisum sativum Psat3g103080 Chromatin assembly factor 1 subunit A chr3LG5 - View
Phaseolus vulgaris Phvul.008G051800 K10750 - chromatin assembly factor 1 subunit A (CHAF1A) Chr08 + View
Rosa chinensis RcHm_v2.0_Chr3g0447421 RcHm_v2.0_Chr3 - View
Salix brachista Sabra08G0057900 GWHAAZH00000008 + View
Simmondsia chinensis Sc16g0010640 GWHAASQ00000016 + View
Solanum pennellii Sopen11g004450 Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. | FASCIATA 1 (FAS1) | FUNCTIONS IN: histone binding | INVOLVED IN: in 11 processes | LOCATED IN: chromatin assembly complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Chromatin assembly factor 1 subunit A . Spenn-ch11 + View
Selenicereus undatus Hund21931 Scaffold_33680 + View
Theobroma cacao Thecc.05G112200 Chromatin assembly factor 1 subunit A Chromosome_5 + View
Tarenaya hassleriana THA.LOC104805689 chromatin assembly factor 1 subunit FAS1-like isoform X1 NW_010961290.1 - View
Tripterygium wilfordii TWI18G0231 NC_052241.1 + View
Vigna mungo VMungo1383G1707 CM024070.1 + View