Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 0.0e+00 1590.1 910 100.0
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 1.9e-290 1002.7 834 72.5
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 7.7e-244 847.8 832 64.4
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 1.6e-241 840.1 843 64.8
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 2.0e-204 716.8 841 58.0
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 2.3e-184 650.2 841 53.9
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 7.5e-183 645.2 841 54.1
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 9.8e-183 644.8 841 53.4
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 1.6e-180 637.5 848 53.1
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 4.3e-178 629.4 870 50.9
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 3.4e-175 619.8 871 49.3
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 4.4e-175 619.4 811 54.4
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 5.4e-173 612.5 837 53.3
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 1.2e-169 601.3 821 51.3
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 3.1e-168 596.7 868 49.1
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 4.0e-168 596.3 807 52.3
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 1.1e-165 588.2 842 51.1
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 2.4e-165 587.0 839 51.3
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.1e-164 583.9 830 50.1
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 2.1e-164 583.9 834 50.5
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 3.5e-164 583.2 822 51.9
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 4.6e-164 582.8 837 52.6
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 3.0e-163 580.1 814 51.0
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 5.1e-163 579.3 814 51.0
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 1.1e-162 578.2 813 50.2
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 3.6e-161 573.2 829 53.6
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 6.9e-160 568.9 751 54.3
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.2e-159 568.2 823 51.3
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 3.4e-159 566.6 853 46.7
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 7.6e-159 565.5 844 50.8
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 9.9e-159 565.1 820 51.5
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.9e-157 560.8 823 51.2
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 1.9e-157 560.8 822 46.5
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 1.6e-156 557.8 840 53.2
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 1.3e-155 554.7 879 47.0
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 3.0e-155 553.5 836 51.4
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.1e-154 551.6 836 51.3
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 3.3e-154 550.1 804 48.0
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 3.3e-154 550.1 813 43.7
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 4.3e-154 549.7 833 48.4
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 4.3e-154 549.7 852 47.8
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 7.4e-154 548.9 835 50.4
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 2.1e-153 547.4 831 45.4
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 8.1e-153 545.4 837 44.6
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 1.1e-152 545.0 857 47.5
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.8e-152 544.3 823 48.1
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.8e-152 544.3 839 47.6
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 2.4e-152 543.9 811 48.6
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 6.9e-152 542.3 831 43.8
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 2.2e-150 537.3 810 48.0
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 2.9e-150 537.0 833 47.4
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 3.8e-150 536.6 842 42.8
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 2.7e-148 530.4 837 47.6
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 4.6e-148 529.6 832 47.1
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.1e-146 525.0 832 46.6
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 1.9e-146 524.2 808 48.3
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.5e-146 523.9 812 49.6
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 4.3e-146 523.1 832 45.9
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 7.4e-146 522.3 815 46.3
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 2.8e-145 520.4 823 50.2
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 4.8e-145 519.6 809 48.2
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 6.2e-145 519.2 823 49.1
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 2.4e-144 517.3 825 48.0
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 2.4e-144 517.3 830 43.6
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 1.5e-143 514.6 819 44.6
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 2.0e-143 514.2 841 44.7
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 4.5e-143 513.1 808 51.2
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 5.8e-143 512.7 862 48.6
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 5.8e-143 512.7 819 46.5
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 1.0e-142 511.9 769 51.6
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 1.7e-142 511.1 850 43.8
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 1.1e-141 508.4 833 46.8
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 1.1e-141 508.4 775 48.0
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 1.4e-141 508.1 838 46.1
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 1.2e-140 505.0 854 47.0
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 1.6e-140 504.6 846 43.1
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 3.5e-140 503.4 836 45.6
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 7.9e-140 502.3 821 48.4
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 1.9e-138 497.7 821 43.0
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 5.7e-138 496.1 812 48.0
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 9.6e-138 495.4 812 47.9
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 1.3e-137 495.0 788 46.2
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 4.8e-137 493.0 826 47.7
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 8.2e-137 492.3 789 48.5
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 5.0e-134 483.0 856 45.7
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 6.5e-134 482.6 690 50.3
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 8.5e-134 482.3 809 47.6
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 1.9e-133 481.1 796 48.6
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 1.0e-131 475.3 809 46.6
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 3.3e-130 470.3 679 51.1
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 7.4e-130 469.2 779 42.0
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 1.2e-127 461.8 832 44.7
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 1.5e-127 461.5 841 44.2
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.9e-125 454.5 787 48.0
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.5e-125 454.1 685 50.2
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 4.2e-125 453.4 787 48.2
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 5.5e-125 453.0 787 48.0
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 1.6e-124 451.4 787 48.0
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 4.5e-119 433.3 500 50.6
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 4.1e-112 410.2 891 42.4
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 2.2e-110 404.4 878 42.3
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.2e-102 377.9 833 39.1
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 3.8e-102 377.1 920 40.5
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 1.9e-101 374.8 492 49.8
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 1.2e-100 372.1 875 39.2
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 8.8e-99 365.9 764 44.9
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 5.0e-94 350.1 824 36.9
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 1.6e-87 328.6 783 42.1
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 4.6e-79 300.4 857 39.0
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 9.9e-66 256.1 611 40.9
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 8.3e-65 253.1 508 37.0
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.6e-63 248.8 507 36.9
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 1.7e-62 245.4 466 36.9
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 7.3e-61 240.0 253 54.9
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 1.5e-50 205.7 580 29.5
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 9.6e-45 186.4 828 30.1
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 1.4e-40 172.6 322 37.6
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 5.4e-40 170.6 733 32.9
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 2.7e-39 168.3 375 33.9
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 4.6e-39 167.5 198 53.0
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 6.0e-39 167.2 452 34.5
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 3.5e-31 141.4 111 64.9
MSTRG.340 Avicennia marina HOM05D005855 ORTHO05D006406 2.8e-28 131.7 129 55.8
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 1.4e-27 129.4 195 41.0
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 6.7e-22 110.5 264 33.0
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 8.7e-22 110.2 174 40.2
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 3.7e-20 104.8 197 37.1
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 5.3e-19 100.9 151 39.7
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 2.4e-11 75.5 76 53.9
Lju114A5T28 Lonicera japonica HOM05D005855 ORTHO05D006406 5.3e-11 74.3 121 40.5
Zm00001eb367440 Zea mays HOM05D005855 ORTHO05D006406 2.2e-09 68.9 118 44.1
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 1.1e-08 66.6 117 49.6
MCO02G251 Micromonas commoda HOM05D005855 ORTHO05D006406 1.4e-08 66.2 523 25.8
Ah.06g195240 Amaranthus hybridus HOM05D000941 ORTHO05D000882 1.6e-07 62.8 79 43.0
Ah.06g195260 Amaranthus hybridus HOM05D005855 ORTHO05D006406 4.7e-07 61.2 133 37.6
Nn8g40536 Nelumbo nucifera HOM05D005855 ORTHO05D006406 3.0e-06 58.5 82 39.0


User provided reference genes

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