Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold85G26751 scaffold85 - View
SGA_v2.0_scaffold240G44101 scaffold240 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G22870 LG-1 + View
Acer truncatum Atru.chr8.2215 chr8 + View
Actinidia chinensis Actinidia20722 Lachesis_group0 - View
Actinidia chinensis Actinidia13924 Lachesis_group21 + View
Arabidopsis lyrata AL4G35120 scaffold_4 + View
Arabidopsis lyrata AL4G37650 scaffold_4 + View
Avicennia marina MSTRG.19020 ScioBoG_25048_HRSCAF_25167 - View
Aquilegia oxysepala Aqoxy2G00932 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R5YX1M PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT2G38120 Transmembrane amino acid transporter family protein Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence. AUXIN RESISTANT 1 (AUX1)%3B CONTAINS InterPro DOMAIN/s: Amino acid transporter%2C transmembrane (InterPro:IPR013057)%3B BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1)%3B Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 116%3B Fungi - 283%3B Plants - 825%3B Viruses - 0%3B Other Eukaryotes - 32 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0618G371 AmTr_v1.0_scaffold00029 - View
Brassica carinata BcaC02g07492 ChrC02 - View
Brassica carinata BcaB06g29031 ChrB06 + View
Brassica carinata BcaC01g05567 ChrC01 - View
Brassica napus A04p29220 A04 + View
Brassica napus C04p09560 C04 - View
Brassica napus C04p66450 C04 + View
Brassica napus A05p07910 A05 - View
Brassica oleracea BolC4t28149H C4 + View
Brassica oleracea BolC4t22562H C4 - View
Brassica oleracea BolC3t14872H C3 + View
Brassica rapa BraA05t19757Z A05 - View
Camellia sinensis var. sinensis CSS0046696 unnamed protein product [Coffea canephora] Chr4 + View
Cicer arietinum L. Ca_07623_v3 Ca_LG3_v3 + View
Corylus avellana Haze_20974 Similar to LAX2: Auxin transporter-like protein 2 (Medicago truncatula OX%3D3880) 10 + View
Coffea canephora Cc02_g06770 Auxin transporter-like protein 2 chr2 - View
Coffea canephora Cc06_g01510 Auxin transporter-like protein 2 chr6 - View
Citrus clementina Ciclev10031413m.g scaffold_4 + View
Citrus clementina Ciclev10011596m.g scaffold_6 + View
Carpinus fangiana Cfa017232 Cfa07 - View
Carya illinoinensis CiPaw.10G155600 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED Chr10 + View
Carya illinoinensis CiPaw.09G207600 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED Chr09 + View
Citrullus lanatus ClCG10G021980 Auxin transporter-like protein CG_Chr10 + View
Cucumis melo MELO3C009181.2 Auxin transporter-like protein 2 chr04 + View
Capsella rubella Carub.0004s2217 K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) scaffold_4 + View
Capsella rubella Carub.0004s2009 K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) scaffold_4 + View
Cucumis sativus L. CsaV3_3G034000 Auxin transporter-like protein chr3 - View
Cucumis sativus L. CsaV3_4G026200 Auxin transporter-like protein chr4 - View
Daucus carota DCAR_018713 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv13656 GWHABJS00000015 - View
Davidia involucrata Dinv34409 GWHABJS00000009 + View
Durio zibethinus Duzib128G1864 NW_019168481.1 + View
Durio zibethinus Duzib106G0397 NW_019168492.1 + View
Durio zibethinus Duzib114G0904 NW_019167926.1 - View
Durio zibethinus Duzib093G2219 NW_019167937.1 + View
Erigeron canadensis ECA236G0585 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.K02992 Chr11 - View
Eucalyptus grandis Eucgr.A00514 Chr01 + View
Erythranthe guttata Migut.J00185 scaffold_10 - View
Erythranthe guttata Migut.L02001 scaffold_12 + View
Eutrema salsugineum Thhalv10016566m.g K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) scaffold_10 + View
Eutrema salsugineum Thhalv10013364m.g scaffold_2 - View
Eutrema salsugineum Thhalv10016637m.g K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) scaffold_10 + View
Fragaria x ananassa FAN02G3457 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED Fvb6-4 - View
Fragaria x ananassa FAN14G3464 PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Fvb6-1 + View
Fragaria x ananassa FAN05G2403 PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Fvb6-3 - View
Gossypium hirsutum Gohir.D09G159800 K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) D09 + View
Gossypium hirsutum Gohir.A04G089200 K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) A04 + View
Gossypium hirsutum Gohir.D04G129401 K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) D04 + View
Gossypium hirsutum Gohir.A09G164200 K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) A09 + View
Glycine max Glyma.18G198400 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED Gm18 + View
Gossypium raimondii Gorai.006G181400 Chr06 + View
Gossypium raimondii Gorai.012G112900 Chr12 + View
Lupinus albus Lalb_Chr01g0022951 PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Lalb_Chr01 + View
Lupinus albus Lalb_Chr03g0043091 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED Lalb_Chr03 + View
Lotus japonicus Lj1g0005179 PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED chr1 - View
Lotus japonicus Lj3g0005588 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED chr3 + View
Lonicera japonica Lj2A77T29 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_8_100100 K13946 - auxin influx carrier (AUX1 LAX family) (AUX1, LAX) Lsat_1_v8_lg_8 + View
Malus domestica MD12G1162400 Transmembrane amino acid transporter family protein Chr12 + View
Manihot esculenta Manes.09G107800 Chromosome09 + View
Manihot esculenta Manes.08G090700 Chromosome08 + View
Olea europaea Oeu033603.1 chr11 + View
Petunia axillaris Peaxi162Scf00014g00614 Auxin transporter-like protein 2 Peaxi162Scf00014 - View
Punica granatum PGR004G2127 NC_045131.1 - View
Populus trichocarpa Potri.010G191000 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED Chr10 - View
Populus trichocarpa Potri.006G098300 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED Chr06 - View
Phaseolus vulgaris Phvul.008G106300 PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Chr08 - View
Quercus lobata QL07p035898 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0463551 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim09G0173500 chr09 + View
Salvia bowleyana SalBow5G5359 GWHASIU00000003 + View
Salix brachista Sabra16G0109000 GWHAAZH00000016 + View
Salix brachista Sabra06G0075600 GWHAAZH00000006 - View
Simmondsia chinensis Sc07g0006520 GWHAASQ00000007 + View
Simmondsia chinensis Sc01g0006540 GWHAASQ00000001 - View
Sechium edule Sed0020972 LG04 + View
Sechium edule Sed0017893 LG03 - View
Solanum lycopersicum Solyc10g076790.2 Auxin transporter-like protein 1 (AHRD V3.3 *** A0A2G2YL11_CAPAN) SL4.0ch10 - View
Schrenkiella parvula Sp4g20440 PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED ch4-6 + View
Solanum pennellii Sopen10g028420 Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic), Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. | AUXIN RESISTANT 1 (AUX1) | CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane | BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400019182 Auxin influx transport protein ST4.03ch10 - View
Trochodendron aralioides TAR623G1110 group7 + View
Theobroma cacao Thecc.10G022900 Like AUXIN RESISTANT 1 Chromosome_10 - View
Theobroma cacao Thecc.05G019400 Transmembrane amino acid transporter family protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104805810 auxin transporter protein 1-like NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104810082 auxin transporter-like protein 4 NW_010965122.1 + View
Tripterygium wilfordii TWI53G1779 NC_052244.1 + View
Tripterygium wilfordii TWI77G0295 NC_052236.1 + View
Tripterygium wilfordii TWI74G1618 NC_052234.1 - View
Vaccinium macrocarpon vmacro20242 Similar to LAX4: Auxin transporter-like protein 4 (Medicago truncatula OX%3D3880) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01032855001 chr13 + View