Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G5850 LG-6 - View
Aethionema arabicum Aa31LG6G840 LG-6 - View
Aethionema arabicum Aa31LG9G6440 LG-9 - View
Acer truncatum Atru.chr10.1390 chr10 - View
Acer truncatum Atru.chr10.1524 chr10 + View
Actinidia chinensis Actinidia39547 Lachesis_group17 + View
Actinidia chinensis Actinidia35610 Lachesis_group2 - View
Arabidopsis lyrata AL8G12000 scaffold_8 - View
Arabidopsis lyrata AL7G36290 scaffold_7 + View
Arabidopsis lyrata AL1G43600 scaffold_1 + View
Avicennia marina MSTRG.13238 ScioBoG_17730_HRSCAF_17811 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D8KF1C K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Haloacid dehalogenase-like hydrolase (HAD) superfamily protein%3B FUNCTIONS IN: phosphatase activity%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: pollen tube%3B CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948)%2C NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1)%3B Has 2585 Blast hits to 2574 proteins in 264 species: Archae - 0%3B Bacteria - 16%3B Metazoa - 830%3B Fungi - 532%3B Plants - 436%3B Viruses - 23%3B Other Eukaryotes - 748 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT4G18140 SCP1-like small phosphatase 4b Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4)%2C AT5G11860 (SSP5)%2C AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei%2C whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins%2C with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD%2C whereas SSP5 dephosphorylated only Ser5-PO(4). SCP1-like small phosphatase 4b (SSP4b)%3B CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948)%2C NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4 (TAIR:AT5G46410.1)%3B Has 2632 Blast hits to 2621 proteins in 242 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 837%3B Fungi - 515%3B Plants - 509%3B Viruses - 1%3B Other Eukaryotes - 758 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT5G46410 SCP1-like small phosphatase 4 Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4)%2C AT5G11860 (SSP5)%2C AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei%2C whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins%2C with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD%2C whereas SSP5 dephosphorylated only Ser5-PO(4). SCP1-like small phosphatase 4 (SSP4)%3B CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948)%2C NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4b (TAIR:AT4G18140.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB03g13859 ChrB03 - View
Brassica carinata BcaB03g12177 ChrB03 + View
Brassica carinata BcaC05g26992 ChrC05 + View
Brassica carinata BcaC06g35463 ChrC06 + View
Brassica napus A06p45950 A06 - View
Brassica napus A08p24850 A08 - View
Brassica napus A02p29930 A02 + View
Brassica napus C05p28520 C05 + View
Brassica oleracea BolC3t19873H C3 + View
Brassica oleracea BolC5t31576H C5 + View
Brassica rapa BraA02t08015Z A02 + View
Brassica rapa BraA06t27459Z A06 - View
Camellia sinensis var. sinensis CSS0024826 PREDICTED: probable C-terminal domain small phosphatase [Nicotiana tomentosiformis] Chr8 - View
Capsicum annuum CAN.G411.31 PGAv.1.6.scaffold411 + View
Carpinus fangiana Cfa001014 Cfa01 - View
Cardamine hirsuta CARHR175350 CTD small phosphatase-like protein Chr6 - View
Cardamine hirsuta CARHR224880 SCP1-like small phosphatase 4b Chr7 - View
Chenopodium quinoa AUR62027556 CTDSPL2: CTD small phosphatase-like protein 2 C_Quinoa_Scaffold_1125 - View
Capsella rubella Carub.0008s0148 scaffold_8 - View
Daucus carota DCAR_027968 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv30679 GWHABJS00000020 - View
Durio zibethinus Duzib192G0319 NW_019168037.1 - View
Erythranthe guttata Migut.H01403 scaffold_8 + View
Fragaria x ananassa FAN21G4032 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Fvb3-2 + View
Fragaria x ananassa FAN16G0558 Fvb3-3 - View
Fragaria x ananassa FAN21G2263 K17616 - CTD small phosphatase-like protein 2 [EC:3.1.3.-] (CTDSPL2) Fvb3-2 + View
Fragaria x ananassa FAN25G3231 PTHR12210:SF71 - SCP1-LIKE SMALL PHOSPHATASE 4-RELATED Fvb3-1 + View
Lactuca sativa Lsat_1_v5_gn_7_30960 K17616 - CTD small phosphatase-like protein 2 [EC:3.1.3.-] (CTDSPL2) Lsat_1_v8_lg_7 - View
Olea europaea Oeu042432.1 chr10 + View
Populus trichocarpa Potri.011G078300 PTHR12210//PTHR12210:SF71 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SCP1-LIKE SMALL PHOSPHATASE 4-RELATED Chr11 + View
Quercus lobata QL05p050221 5 + View
Rosa chinensis RcHm_v2.0_Chr5g0012001 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim02G0152500 chr02 + View
Salvia bowleyana SalBow7G3587 GWHASIU00000005 - View
Salix brachista Sabra11G0056400 GWHAAZH00000011 - View
Simmondsia chinensis Sc17g0005570 GWHAASQ00000017 + View
Sechium edule Sed0015299 LG14 - View
Solanum lycopersicum Solyc02g071250.3 CTD small phosphatase-like protein 2 (AHRD V3.3 *** A0A2I4EJV3_9ROSI) SL4.0ch02 - View
Solanum pennellii Sopen02g020310 Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4). | SCP1-like small phosphatase 4 (SSP4) | CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain , NLI interacting factor | BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4b Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400003085 NLI interacting factor (NIF) family protein ST4.03ch02 - View
Selenicereus undatus Hund21478 Scaffold_33680 + View
Tarenaya hassleriana THA.LOC104820702 probable C-terminal domain small phosphatase NW_010966274.1 + View
Tripterygium wilfordii TWI53G2106 NC_052244.1 - View