Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
RcHm_v2.0_Chr6g0303881 RcHm_v2.0_Chr6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.3474 chr5 - View
Actinidia chinensis Actinidia32024 Lachesis_group16 - View
Actinidia chinensis Actinidia18025 Lachesis_group12 + View
Actinidia chinensis Actinidia20543 Lachesis_group25 + View
Arabidopsis lyrata AL7G10300 scaffold_7 + View
Avicennia marina MSTRG.19959 ScioBoG_26180_HRSCAF_26306 + View
Amaranthus hybridus Ah.01g023440 AmaHy_arrow1_Scaffold_1 - View
Amaranthus hybridus Ah.01g008010 Rop guanine nucleotide exchange factor 1 (AtRopGEF1) (Kinase partner protein-like) (KPP-like) (Rho of plants guanine nucleotide exchange factor 1) AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy6G01873 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EU3L7N PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZNW71Q PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT4G38430 rho guanyl-nucleotide exchange factor 1 Member of the RopGEF (guanine nucleotide exchange factor) family%2C containing the novel PRONE domain (plant-specific Rop nucleotide exchanger)%2C which is exclusively active towards members of the Rop subfamily%2C also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity. rho guanyl-nucleotide exchange factor 1 (ROPGEF1)%3B CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger%2C PRONE (InterPro:IPR005512)%3B BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1)%3B Has 308 Blast hits to 304 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 308%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 + View
Beta vulgaris EL10Ac9g21308 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0048912 PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis vinifera] Chr6 + View
Capsicum annuum CAN.G1235.34 PGAv.1.6.scaffold1235 + View
Cannabis sativa CANSAT25G0514 NC_044370.1 + View
Cicer arietinum L. Ca_18992_v3 Ca_LG6_v3 + View
Corylus avellana Haze_02068 Similar to ROPGEF1: Rop guanine nucleotide exchange factor 1 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_22733 Similar to ROPGEF1: Rop guanine nucleotide exchange factor 1 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc10_g00940 Rop guanine nucleotide exchange factor 1 chr10 - View
Coffea canephora Cc09_g10440 Rop guanine nucleotide exchange factor 1 chr9 - View
Citrus clementina Ciclev10028096m.g scaffold_8 - View
Citrus clementina Ciclev10000760m.g scaffold_5 - View
Ceratophyllum demersum CDE05G3161 3 + View
Carpinus fangiana Cfa005317 Cfa02 - View
Cardamine hirsuta CARHR294160 Rop guanine nucleotide exchange factor, putative scaffold1271 + View
Carya illinoinensis CiPaw.06G118800 PTHR33101//PTHR33101:SF6 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Chr06 + View
Carya illinoinensis CiPaw.05G087300 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Chr05 - View
Carya illinoinensis CiPaw.08G070200 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Chr08 - View
Citrullus lanatus ClCG02G011050 Rop guanine nucleotide exchange factor, putative CG_Chr02 + View
Cucumis melo MELO3C013654.2 rop guanine nucleotide exchange factor 1 chr11 + View
Corchorus olitorius COL.COLO4_18002 Plant specific Rop nucleotide exchanger%2C PRONE AWUE01016405.1 + View
Carica papaya Cpa.g.sc20.135 supercontig_20 - View
Chenopodium quinoa AUR62012977 ROPGEF1: Rop guanine nucleotide exchange factor 1 C_Quinoa_Scaffold_1040 + View
Chenopodium quinoa AUR62009989 ROPGEF1: Rop guanine nucleotide exchange factor 1 C_Quinoa_Scaffold_1257 + View
Capsella rubella Carub.0007s0032 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 scaffold_7 + View
Daucus carota DCAR_022413 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv14142 GWHABJS00000005 + View
Davidia involucrata Dinv39567 GWHABJS00000011 - View
Davidia involucrata Dinv31910 GWHABJS00000002 - View
Durio zibethinus Duzib052G0209 NW_019167849.1 - View
Durio zibethinus Duzib116G0264 NW_019167949.1 + View
Durio zibethinus Duzib248G0098 NW_019168048.1 - View
Durio zibethinus Duzib132G0250 NW_019167915.1 + View
Erigeron canadensis ECA246G3410 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA234G2122 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.I01471 Chr09 - View
Erythranthe guttata Migut.B00039 scaffold_2 + View
Eutrema salsugineum Thhalv10024857m.g scaffold_1 + View
Fragaria x ananassa FAN24G2251 PTHR33101//PTHR33101:SF6 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Fvb2-2 + View
Fragaria x ananassa FAN20G1052 PTHR33101//PTHR33101:SF6 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Fvb2-3 + View
Fragaria x ananassa FAN15G3538 PTHR33101//PTHR33101:SF6 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Fvb2-4 - View
Fragaria x ananassa FAN15G0084 PTHR33101//PTHR33101:SF6 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Fvb2-4 - View
Fragaria x ananassa FAN27G0732 PTHR33101//PTHR33101:SF6 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Fvb2-1 - View
Fragaria vesca FvH4_2g15940 PTHR33101//PTHR33101:SF6 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Fvb2 - View
Gossypium hirsutum Gohir.A03G206600 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 A03 - View
Gossypium hirsutum Gohir.D01G162820 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 D01 - View
Gossypium hirsutum Gohir.D02G228000 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 D02 - View
Gossypium hirsutum Gohir.A05G181700 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 A05 + View
Gossypium hirsutum Gohir.A01G171800 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 A01 - View
Glycine max Glyma.11G097400 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Gm11 + View
Glycine max Glyma.12G023400 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Gm12 + View
Gossypium raimondii Gorai.005G255800 Chr05 - View
Gossypium raimondii Gorai.009G190200 Chr09 + View
Gossypium raimondii Gorai.002G202000 Chr02 - View
Helianthus annuus HanXRQChr17g0543811 Putative PRONE domain HanXRQChr17 + View
Hydrangea macrophylla Hma1.2p1_0163F.1_g072860 Hma1.2p1_0163F.1 - View
Hydrangea macrophylla Hma1.2p1_0032F.1_g018980 Hma1.2p1_0032F.1 + View
Lupinus albus Lalb_Chr01g0001241 PTHR33101//PTHR33101:SF6 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Lalb_Chr01 + View
Lotus japonicus Lj3g0008433 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 chr3 + View
Lonicera japonica Lj9A402T72 GWHAAZE00000009 - View
Lonicera japonica Lj4C15G5 GWHAAZE00000004 + View
Lonicera japonica Lj5C174T6 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_69980 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_3_47280 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI08_g05397_MAGBIO AED:0.06 Chr08 + View
Malus domestica MD05G1128400 rho guanyl-nucleotide exchange factor 1 Chr05 - View
Malus domestica MD08G1005600 rho guanyl-nucleotide exchange factor 1 Chr08 + View
Malus domestica MD10G1131700 rho guanyl-nucleotide exchange factor 1 Chr10 - View
Manihot esculenta Manes.04G068900 Chromosome04 + View
Medicago truncatula Medtr4g075640 Rop guanine nucleotide exchange factor chr4 - View
Nelumbo nucifera Nn5g30885 chr5 - View
Nelumbo nucifera Nn6g31849 chr6 + View
Nicotiana tabacum Nitab4.5_0003603g0080 PRONE domain Nitab4.5_0003603 + View
Petunia axillaris Peaxi162Scf00362g00038 ROP guanine nucleotide exchange factor 5 Peaxi162Scf00362 + View
Punica granatum PGR142G3748 NC_045128.1 + View
Prunus persica Prupe.8G172500 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Pp08 - View
Papaver somniferum PSO541G5324 NC_039363.1 + View
Papaver somniferum PSO170G4323 NC_039360.1 - View
Papaver somniferum PSO210G4603 NC_039359.1 - View
Populus trichocarpa Potri.004G179742 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Chr04 - View
Populus trichocarpa Potri.009G140100 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Chr09 - View
Populus trichocarpa Potri.002G014100 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Chr02 + View
Phaseolus vulgaris Phvul.011G025500 PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Chr11 + View
Quercus lobata QL11p053264 11 - View
Quercus lobata QL02p013440 CM012294 - View
Rhododendron simsii Rhsim11G0195200 chr11 - View
Rhododendron simsii Rhsim05G0050300 chr05 + View
Striga asiatica SGA_v2.0_scaffold58G20333 scaffold58 + View
Salvia bowleyana SalBow1G2625 GWHASIU00000001 + View
Salix brachista Sabra09G0108700 GWHAAZH00000009 - View
Salix brachista Sabra04G0121200 GWHAAZH00000004 - View
Simmondsia chinensis Sc08g0002630 GWHAASQ00000008 + View
Simmondsia chinensis Sc18g0006110 GWHAASQ00000018 + View
Sechium edule Sed0023894 LG05 + View
Solanum lycopersicum Solyc01g111930.4 Rop guanine nucleotide exchange factor 1 (AHRD V3.3 *** A0A2G2W9R1_CAPBA) SL4.0ch01 - View
Solanum pennellii Sopen01g053980 Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity. | rho guanyl-nucleotide exchange factor 1 (ROPGEF1) | CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE | BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400018648 Rop guanine nucleotide exchange factor ST4.03ch01 + View
Trochodendron aralioides TAR628G0130 group5 - View
Trochodendron aralioides TAR376G0845 group14 - View
Theobroma cacao Thecc.08G054300 Rho guanyl-nucleotide exchange factor 1 Chromosome_8 - View
Theobroma cacao Thecc.02G052400 Rho guanyl-nucleotide exchange factor 1 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104824746 rop guanine nucleotide exchange factor 1 NW_010966933.1 + View
Utricularia gibba unitig_21.g20848 unitig_21 - View
Vaccinium macrocarpon vmacro02303 Similar to ROPGEF1: Rop guanine nucleotide exchange factor 1 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro04386 Similar to ROPGEF1: Rop guanine nucleotide exchange factor 1 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro17269 Similar to ROPGEF1: Rop guanine nucleotide exchange factor 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G0083 CM024076.1 + View
Vitis vinifera GSVIVG01023897001 chr3 + View