Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G15250 LG-6 - View
Aethionema arabicum Aa31LG1G16690 LG-1 - View
Aethionema arabicum Aa31LG3G16890 LG-3 - View
Acer truncatum Atru.chr3.1362 chr3 - View
Actinidia chinensis Actinidia19998 Lachesis_group11 - View
Actinidia chinensis Actinidia06545 Lachesis_group16 + View
Arabidopsis lyrata AL4G11780 scaffold_4 + View
Avicennia marina MSTRG.2577 ScioBoG_102835_HRSCAF_103059 + View
Aquilegia oxysepala Aqoxy6G00735 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VDBV8A K07904 - Ras-related protein Rab-11A (RAB11A) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UY4KU0 K07904 - Ras-related protein Rab-11A (RAB11A) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT2G22290 RAB GTPase homolog H1D RAB GTPase homolog H1D (RABH1d)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Rab6-related (InterPro:IPR015600)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1E (TAIR:AT5G10260.1)%3B Has 26960 Blast hits to 26930 proteins in 721 species: Archae - 17%3B Bacteria - 142%3B Metazoa - 14130%3B Fungi - 3768%3B Plants - 3162%3B Viruses - 20%3B Other Eukaryotes - 5721 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G65270 RAB GTPase homolog A4A RAB GTPase homolog A4A (RABA4a)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: plasma membrane%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Rab11-related (InterPro:IPR015595)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4B (TAIR:AT4G39990.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB08g37115 ChrB08 - View
Brassica carinata BcaB01g05543 ChrB01 - View
Brassica carinata BcaNung00923 Contig372 + View
Brassica napus A01p00890 A01 + View
Brassica napus C01p01020 C01 + View
Brassica napus C09p67060 C09 - View
Brassica oleracea BolC9t59479H C9 - View
Brassica oleracea BolC1t00099H C1 + View
Brassica rapa BraA01t00088Z A01 + View
Beta vulgaris EL10Ac6g14825 K07904 - Ras-related protein Rab-11A (RAB11A) Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0041081 PREDICTED: ras-related protein Rab11A [Nelumbo nucifera] Chr1 - View
Camellia sinensis var. sinensis CSS0002697 PREDICTED: ras-related protein RABH1e [Sesamum indicum] Chr2 + View
Capsicum annuum CAN.G905.29 PGAv.1.6.scaffold905 - View
Cannabis sativa CANSAT01G0543 NC_044373.1 + View
Cicer arietinum L. Ca_16515_v3 Ca_LG5_v3 - View
Corylus avellana Haze_24877 Similar to RAB11D: Ras-related protein Rab11D (Nicotiana tabacum OX%3D4097) 8 - View
Coffea canephora Cc07_g14760 Ras-related protein RABA4a chr7 - View
Citrus clementina Ciclev10026427m.g scaffold_7 - View
Ceratophyllum demersum CDE03G0489 12 - View
Ceratophyllum demersum CDE10G0957 8 - View
Carpinus fangiana Cfa002616 Cfa01 - View
Cardamine hirsuta CARHR279220 Ras-related protein Rab-25 Chr8 + View
Cardamine hirsuta CARHR246690 Ras-related protein Rab-25 Chr7 - View
Carya illinoinensis CiPaw.04G102900 K07904 - Ras-related protein Rab-11A (RAB11A) Chr04 + View
Carya illinoinensis CiPaw.05G033100 K07904 - Ras-related protein Rab-11A (RAB11A) Chr05 - View
Citrullus lanatus ClCG01G018620 Ras-related protein Rab-25 CG_Chr01 - View
Cucumis melo MELO3C007742.2 ras-related protein Rab11A chr08 - View
Corchorus olitorius COL.COLO4_27281 Small GTPase superfamily AWUE01019526.1 + View
Carica papaya Cpa.g.sc55.84 supercontig_55 - View
Chenopodium quinoa AUR62003251 RAB11D: Ras-related protein Rab11D C_Quinoa_Scaffold_1000 + View
Chenopodium quinoa AUR62027219 RAB11D: Ras-related protein Rab11D C_Quinoa_Scaffold_2924 - View
Cucumis sativus L. CsaV3_6G045290 Ras-related protein like chr6 - View
Daucus carota DCAR_003478 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv13220 GWHABJS00000014 - View
Davidia involucrata Dinv08848 GWHABJS00000021 - View
Durio zibethinus Duzib264G0726 NW_019167960.1 + View
Durio zibethinus Duzib147G0506 NW_019168470.1 + View
Eucalyptus grandis Eucgr.I00531 Chr09 + View
Erythranthe guttata Migut.H02343 scaffold_8 - View
Eutrema salsugineum Thhalv10000663m.g PTHR24073:SF475 - RAS-RELATED PROTEIN RABH1C-RELATED scaffold_15 + View
Eutrema salsugineum Thhalv10004873m.g K07904 - Ras-related protein Rab-11A (RAB11A) scaffold_6 - View
Fragaria x ananassa FAN26G1715 K07904 - Ras-related protein Rab-11A (RAB11A) Fvb1-2 - View
Fragaria x ananassa FAN23G0758 K07904 - Ras-related protein Rab-11A (RAB11A) Fvb1-3 - View
Fragaria x ananassa FAN28G0985 K07904 - Ras-related protein Rab-11A (RAB11A) Fvb1-1 + View
Fragaria x ananassa FAN19G3042 K07904 - Ras-related protein Rab-11A (RAB11A) Fvb1-4 - View
Fragaria vesca FvH4_1g20380 K07904 - Ras-related protein Rab-11A (RAB11A) Fvb1 - View
Gossypium hirsutum Gohir.D11G054700 K07904 - Ras-related protein Rab-11A (RAB11A) D11 - View
Gossypium hirsutum Gohir.A11G051300 K07904 - Ras-related protein Rab-11A (RAB11A) A11 - View
Gossypium hirsutum Gohir.D12G083100 K07893 - Ras-related protein Rab-6A (RAB6A) D12 - View
Gossypium hirsutum Gohir.D03G039800 KOG0087 - GTPase Rab11/YPT3, small G protein superfamily D03 + View
Gossypium hirsutum Gohir.D11G219500 K07904 - Ras-related protein Rab-11A (RAB11A) D11 - View
Gossypium hirsutum Gohir.A02G129000 KOG0087 - GTPase Rab11/YPT3, small G protein superfamily A02 + View
Glycine max Glyma.05G176300 K07904 - Ras-related protein Rab-11A (RAB11A) Gm05 - View
Glycine max Glyma.08G133800 K07904 - Ras-related protein Rab-11A (RAB11A) Gm08 - View
Glycine max Glyma.18G015700 K07904 - Ras-related protein Rab-11A (RAB11A) Gm18 - View
Gossypium raimondii Gorai.007G060000 Chr07 - View
Gossypium raimondii Gorai.003G040900 Chr03 + View
Gossypium raimondii Gorai.008G090100 Chr08 - View
Lupinus albus Lalb_Chr07g0185291 K07904 - Ras-related protein Rab-11A (RAB11A) Lalb_Chr07 + View
Lonicera japonica Lj4A898G54 GWHAAZE00000004 + View
Lonicera japonica Lj2C541G13 GWHAAZE00000002 - View
Magnolia biondii MBI02_g27967_MAGBIO AED:0.04 Chr02 + View
Malus domestica MD15G1321700 RAB GTPase homolog A4A Chr15 - View
Manihot esculenta Manes.13G095900 Chromosome13 + View
Manihot esculenta Manes.12G131100 Chromosome12 - View
Medicago truncatula Medtr8g089985 RAB GTPase-like protein A1D chr8 - View
Medicago truncatula Medtr3g086980 RAB GTPase-like protein A1D chr3 - View
Nelumbo nucifera Nn5g30028 chr5 - View
Nelumbo nucifera Nn1g05427 chr1 + View
Nicotiana tabacum Nitab4.5_0002604g0020 Ran GTPase, Small GTPase superfamily, Small GTPase superfamily, Rab type, Small GTPase superfamily, Ras type, Small GTP-binding protein domain, Small GTPase superfamily, ARF type, P-loop containing nucleoside triphosphate hydrolase, Small GTPase superfamily, Rho type Nitab4.5_0002604 + View
Olea europaea Oeu056634.1 chr18 + View
Petunia axillaris Peaxi162Scf00569g00528 RAB GTPase homolog A3 Peaxi162Scf00569 - View
Petunia axillaris Peaxi162Scf00381g00610 RAB GTPase homolog A3 Peaxi162Scf00381 - View
Punica granatum PGR004G1053 NC_045131.1 + View
Punica granatum PGR102G0139 NC_045129.1 - View
Pisum sativum Psat7g057080 Ras family chr7LG7 - View
Papaver somniferum PSO781G0250 NW_020624377.1 + View
Papaver somniferum PSO541G0824 NC_039363.1 - View
Populus trichocarpa Potri.007G096000 K07904 - Ras-related protein Rab-11A (RAB11A) Chr07 + View
Populus trichocarpa Potri.005G073000 K07904 - Ras-related protein Rab-11A (RAB11A) Chr05 - View
Phaseolus vulgaris Phvul.002G261400 K07904 - Ras-related protein Rab-11A (RAB11A) Chr02 - View
Phaseolus vulgaris Phvul.001G253300 K07904 - Ras-related protein Rab-11A (RAB11A) Chr01 + View
Quercus lobata QL06p048317 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0112511 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim10G0166800 chr10 + View
Striga asiatica SGA_v2.0_scaffold195G40797 scaffold195 + View
Striga asiatica SGA_v2.0_scaffold335G49104 scaffold335 - View
Salix brachista Sabra07G0079100 GWHAAZH00000007 + View
Simmondsia chinensis Sc03g0000090 GWHAASQ00000003 + View
Sechium edule Sed0016047 LG14 - View
Sechium edule Sed0027141 LG10 - View
Solanum lycopersicum Solyc11g010100.2 Ras-related protein RABA4a (AHRD V3.3 *** A0A2G2Y594_CAPAN) SL4.0ch11 + View
Solanum lycopersicum Solyc05g051570.3 Rab family GTPase (AHRD V3.3 *** A0A1Y1IFP9_KLENI) SL4.0ch05 - View
Schrenkiella parvula Sp6g33100 K07904 - Ras-related protein Rab-11A (RAB11A) ch6-6 - View
Schrenkiella parvula Sp4g01330 PTHR24073//PTHR24073:SF475 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABH1C-RELATED ch4-1 + View
Schrenkiella parvula Sp7g35880 PTHR24073//PTHR24073:SF517 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA4B-RELATED ch7-6 - View
Solanum pennellii Sopen11g004900 Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco), RAB GTPase homolog A4A (RABA4a) | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab11-related | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4B Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400016224 NtRab11D ST4.03ch11 - View
Selenicereus undatus Hund16562 Scaffold_33677 - View
Selenicereus undatus Hund14108 Scaffold_33679 - View
Trochodendron aralioides TAR376G0398 group14 + View
Trochodendron aralioides TAR628G0817 group5 + View
Trochodendron aralioides TAR381G1339 group11 - View
Theobroma cacao Thecc.01G097000 RAB GTPase A4A Chromosome_1 - View
Tarenaya hassleriana THA.LOC104798856 ras-related protein RABA4a NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104801674 ras-related protein RABA4a-like NW_010969839.1 + View
Tarenaya hassleriana THA.LOC104824883 ras-related protein RABA4b NW_010966933.1 + View
Trifolium pratense TPR.G16009 Tp57577_TGAC_v2_LG2 - View
Trifolium pratense TPR.G6265 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI77G0267 NC_052236.1 - View
Tripterygium wilfordii TWI74G1011 NC_052234.1 - View
Utricularia gibba unitig_32.g10732 unitig_32 - View
Utricularia gibba unitig_899.g14552 unitig_899 + View
Utricularia gibba unitig_699.g19583 unitig_699 - View
Vaccinium macrocarpon vmacro12975 Similar to RAB11D: Ras-related protein Rab11D (Nicotiana tabacum OX%3D4097) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G2353 CM024070.1 + View
Vigna mungo VMungo0251G0258 CM024069.1 - View
Vitis vinifera GSVIVG01003415001 chr7 + View
Zea mays Zm00001eb109670 Zm00001e010806 Ras-related protein RABH1e 2 + View