Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G2000 LG-7 + View
Arabidopsis lyrata AL1G29380 scaffold_1 + View
Arabidopsis lyrata AL2G38770 scaffold_2 - View
Arabidopsis thaliana AT1G17150 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1)%3B Has 3925 Blast hits to 3904 proteins in 469 species: Archae - 4%3B Bacteria - 1051%3B Metazoa - 14%3B Fungi - 1254%3B Plants - 1494%3B Viruses - 0%3B Other Eukaryotes - 108 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB03g16015 ChrB03 - View
Brassica carinata BcaC05g25662 ChrC05 - View
Brassica napus A09p60570 A09 - View
Brassica napus A06p13060 A06 + View
Brassica rapa BraA06t24465Z A06 + View
Corylus avellana Haze_08494 Similar to plaa2: Exopolygalacturonase (Fragment) (Platanus acerifolia OX%3D140101) 4 + View
Coffea canephora Cc00_g31990 Polygalacturonase chr0 + View
Citrus clementina Ciclev10023493m.g scaffold_3 - View
Cardamine hirsuta CARHR017730 Polygalacturonase-like protein Chr1 + View
Capsella rubella Carub.0001s1690 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase scaffold_1 + View
Cucumis sativus L. CsaV3_4G007850 exopolygalacturonase chr4 + View
Durio zibethinus Duzib268G0830 NW_019168270.1 + View
Durio zibethinus Duzib213G0542 NW_019167993.1 + View
Eutrema salsugineum Thhalv10009641m.g K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) scaffold_5 - View
Fragaria x ananassa FAN16G3009 PTHR31375//PTHR31375:SF10 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Fvb3-3 + View
Fragaria x ananassa FAN21G3528 PTHR31375//PTHR31375:SF10 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Fvb3-2 + View
Fragaria x ananassa FAN25G3458 PTHR31375//PTHR31375:SF10 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Fvb3-1 - View
Fragaria x ananassa FAN11G0466 PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Fvb3-4 - View
Fragaria vesca FvH4_3g16670 PTHR31375//PTHR31375:SF10 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Fvb3 + View
Gossypium hirsutum Gohir.D01G029250 PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED D01 - View
Gossypium hirsutum Gohir.A01G041700 PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED A01 - View
Gossypium raimondii Gorai.002G038500 Chr02 - View
Malus domestica MD05G1208400 Pectin lyase-like superfamily protein Chr05 - View
Malus domestica MD10G1194900 Pectin lyase-like superfamily protein Chr10 - View
Quercus lobata QL08p028988 8 + View
Quercus lobata QL04p070452 4 + View
Rosa chinensis RcHm_v2.0_Chr5g0027771 RcHm_v2.0_Chr5 + View
Salix brachista Sabra16G0248800 GWHAAZH00000016 - View
Sechium edule Sed0013188 LG13 + View
Schrenkiella parvula Sp1g15300 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) ch1-1 + View
Schrenkiella parvula Sp5g33500 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase ch5-7 - View
Theobroma cacao Thecc.07G146800 Pectin lyase-like superfamily protein Chromosome_7 + View
Tripterygium wilfordii TWI38G1213 NC_052252.1 + View