Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G4110 LG-10 - View
Aethionema arabicum Aa31LG8G6460 LG-8 + View
Acer truncatum Atru.chr5.2272 chr5 - View
Actinidia chinensis Actinidia28001 Lachesis_group16 - View
Actinidia chinensis Actinidia00354 Lachesis_group12 + View
Actinidia chinensis Actinidia02443 Lachesis_group2 + View
Arabidopsis lyrata AL1G57580 scaffold_1 + View
Arabidopsis lyrata AL3G33130 scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P17M1H PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JS2UUQ PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT1G50010 tubulin alpha-2 chain Encodes alpha-2%2C4 tubulin. TUA2 and TUA4 encode identical proteins. tubulin alpha-2 chain (TUA2)%3B FUNCTIONS IN: structural constituent of cytoskeleton%3B INVOLVED IN: microtubule-based process%2C response to salt stress%3B LOCATED IN: tubulin complex%2C cytosol%2C cell wall%2C membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452)%2C Tubulin (InterPro:IPR000217)%2C Tubulin/FtsZ%2C GTPase domain (InterPro:IPR003008)%2C Tubulin/FtsZ%2C N-terminal (InterPro:IPR019746)%2C Tubulin/FtsZ%2C C-terminal (InterPro:IPR008280)%2C Tubulin%2C conserved site (InterPro:IPR017975)%2C Tubulin/FtsZ%2C 2-layer sandwich domain (InterPro:IPR018316)%3B BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1)%3B Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4%3B Bacteria - 25%3B Metazoa - 4391%3B Fungi - 13400%3B Plants - 1532%3B Viruses - 0%3B Other Eukaryotes - 3274 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB04g17279 ChrB04 - View
Brassica rapa BraA08t32372Z A08 - View
Camellia sinensis var. sinensis CSS0009077 Tubulin alpha chain [Morus notabilis] Chr13 - View
Camellia sinensis var. sinensis CSS0000136 PREDICTED: tubulin alpha chain isoform X2 [Prunus mume] Chr3 + View
Cicer arietinum L. Ca_11025_v3 Ca_LG4_v3 - View
Corylus avellana Haze_10293 Similar to TUBA: Tubulin alpha chain (Prunus dulcis OX%3D3755) 9 + View
Coffea canephora Cc02_g20090 Tubulin alpha chain chr2 + View
Citrus clementina Ciclev10028426m.g scaffold_8 - View
Carpinus fangiana Cfa004697 Cfa02 + View
Cardamine hirsuta CARHR040120 Tubulin alpha-2/alpha-4 chain Chr1 + View
Cardamine hirsuta CARHR095140 Tubulin alpha-2/alpha-4 chain Chr3 + View
Carya illinoinensis CiPaw.05G020900 K07374 - tubulin alpha (TUBA) Chr05 - View
Carya illinoinensis CiPaw.06G163800 K07374 - tubulin alpha (TUBA) Chr06 + View
Citrullus lanatus ClCG10G010020 Tubulin alpha chain CG_Chr10 - View
Citrullus lanatus ClCG02G007140 Tubulin alpha chain, putative CG_Chr02 + View
Cucumis melo MELO3C018532.2 tubulin alpha chain-like chr01 + View
Cucumis melo MELO3C018025.2 Tubulin alpha chain chr07 + View
Corchorus olitorius COL.COLO4_32480 Tubulin AWUE01021124.1 - View
Capsella rubella Carub.0001s3919 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED scaffold_1 + View
Cucumis sativus L. CsaV3_4G000060 Tubulin alpha chain chr4 - View
Cucumis sativus L. CsaV3_7G007680 Tubulin alpha chain chr7 - View
Daucus carota DCAR_021941 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv09535 GWHABJS00000005 + View
Davidia involucrata Dinv16068 GWHABJS00000002 - View
Durio zibethinus Duzib052G0108 NW_019167849.1 - View
Durio zibethinus Duzib132G0126 NW_019167915.1 + View
Erigeron canadensis ECA236G0659 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA240G3942 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.G01186 Chr07 - View
Erythranthe guttata Migut.B00472 scaffold_2 + View
Eutrema salsugineum Thhalv10011471m.g K07374 - tubulin alpha (TUBA) scaffold_7 - View
Fragaria x ananassa FAN27G0711 K07374 - tubulin alpha (TUBA) Fvb2-1 - View
Fragaria x ananassa FAN24G2770 K07374 - tubulin alpha (TUBA) Fvb2-2 + View
Fragaria x ananassa FAN20G0663 K07374 - tubulin alpha (TUBA) Fvb2-3 + View
Fragaria x ananassa FAN18G2026 K07374 - tubulin alpha (TUBA) Fvb5-1 - View
Fragaria vesca FvH4_2g03140 K07374 - tubulin alpha (TUBA) Fvb2 - View
Fragaria vesca FvH4_5g33560 K07374 - tubulin alpha (TUBA) Fvb5 - View
Gossypium hirsutum Gohir.A03G180700 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED A03 - View
Gossypium hirsutum Gohir.D02G203123 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED D02 - View
Gossypium hirsutum Gohir.A04G117900 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED A04 - View
Gossypium hirsutum Gohir.D04G159600 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED D04 - View
Glycine max Glyma.10G255500 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED Gm10 - View
Glycine max Glyma.20G136000 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED Gm20 + View
Gossypium raimondii Gorai.005G229600 Chr05 - View
Helianthus annuus HanXRQChr03g0072981 Putative tubulin; Tubulin, C-terminal HanXRQChr03 + View
Lupinus albus Lalb_Chr02g0144891 PTHR11588:SF101 - TUBULIN ALPHA-2 CHAIN-RELATED Lalb_Chr02 - View
Lupinus albus Lalb_Chr21g0307991 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED Lalb_Chr21 - View
Lotus japonicus Lj5g0027146 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED chr5 + View
Lonicera japonica Lj5C221T6 GWHAAZE00000005 + View
Lonicera japonica Lj9C337T5 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_9_113301 PTHR11588:SF101 - TUBULIN ALPHA-2 CHAIN-RELATED Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_7_84761 PTHR11588:SF101 - TUBULIN ALPHA-2 CHAIN-RELATED Lsat_1_v8_lg_7 - View
Magnolia biondii MBI16_g33611_MAGBIO AED:0.01 Chr16 - View
Malus domestica MD10G1111600 tubulin alpha-2 chain Chr10 + View
Malus domestica MD05G1106800 Tubulin/FtsZ family protein Chr05 + View
Manihot esculenta Manes.07G056600 Chromosome07 - View
Manihot esculenta Manes.10G087200 Chromosome10 + View
Medicago truncatula Medtr1g106005 tubulin beta-1 chain chr1 - View
Olea europaea Oeu025306.1 chr19 - View
Olea europaea Oeu010456.1 chr15 + View
Prunus persica Prupe.8G150900 K07374 - tubulin alpha (TUBA) Pp08 + View
Populus trichocarpa Potri.001G289500 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED Chr01 - View
Populus trichocarpa Potri.009G085100 PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED Chr09 - View
Quercus lobata QL11p029236 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0248011 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim05G0093100 chr05 + View
Salix brachista Sabra09G0065500 GWHAAZH00000009 - View
Salix brachista Sabra16G0181100 GWHAAZH00000016 - View
Sechium edule Sed0004020 LG07 + View
Sechium edule Sed0006968 LG13 - View
Sechium edule Sed0027266 LG10 - View
Solanum lycopersicum Solyc12g088180.1 Tubulin alpha chain (AHRD V3.3 *-* A0A2G2V8B9_CAPBA) SL4.0ch12 + View
Solanum pennellii Sopen12g030180 Tubulin alpha-3 chain - Hordeum vulgare (Barley), Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins. | tubulin alpha-2 chain (TUA2) | FUNCTIONS IN: structural constituent of cytoskeleton | INVOLVED IN: microtubule-based process, response to salt stress | LOCATED IN: tubulin complex, cytosol, cell wall, membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Alpha tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400011537 Alpha-tubulin ST4.03ch12 + View
Trochodendron aralioides TAR381G0277 group11 - View
Theobroma cacao Thecc.02G120400 Tubulin alpha-2 chain Chromosome_2 + View
Tarenaya hassleriana THA.LOC104826499 tubulin alpha-2 chain-like NW_010967707.1 + View
Trifolium pratense TPR.G21133 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI59G1384 NC_052248.1 + View
Vaccinium macrocarpon vmacro01943 Similar to TUBA: Tubulin alpha chain (Prunus dulcis OX%3D3755) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro22258 Similar to TUBA3: Tubulin alpha-3 chain (Hordeum vulgare OX%3D4513) scaffold00322_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1005 CM024071.1 - View
Vitis vinifera GSVIVG01037046001 chr3 + View