Gene: Sopen12g030180

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g030180
  • Transcript Identifier Sopen12g030180.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 79437861-79440920 : positive

Gene Family Information

  • ID HOM05D000349
  • #Genes/#Species 1356/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g030180.1

Descriptions

  • Description Tubulin alpha-3 chain - Hordeum vulgare (Barley), Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins. | tubulin alpha-2 chain (TUA2) | FUNCTIONS IN: structural constituent of cytoskeleton | INVOLVED IN: microtubule-based process, response to salt stress | LOCATED IN: tubulin complex, cytosol, cell wall, membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Alpha tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007017
IEA
InterPromicrotubule-based process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005200
IEA
InterProstructural constituent of cytoskeleton
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005874
IEA
InterPromicrotubule

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR000217 Tubulin
IPR002452 Alpha tubulin
IPR037103 Tubulin/FtsZ-like, C-terminal domain
IPR003008 Tubulin/FtsZ, GTPase domain
IPR023123 Tubulin, C-terminal
IPR008280 Tubulin/FtsZ, C-terminal
Mapman id Description
20.1.1.1 Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component alpha-Tubulin