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Dicots PLAZA 5.0
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Phvul.004G168350
Gene toolbox
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Sequences
BLAST Hits
Orthologs
Colinear Genes Pairs
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Multiple Sequence Alignment
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Warning: This instance will be removed starting from November 1st 2025
Please use the following link from now on:
Dicots 5.1
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
Phvul.002G311400
Chr02
-
View
Orthologs (inter-species colinear regions)
Organism
Gene id
Description
Chromosome
Strand
Multiplicon
Aethionema arabicum
Aa31LG8G17030
LG-8
-
View
Aethionema arabicum
Aa31LG2G21540
LG-2
-
View
Acer truncatum
Atru.chr7.1390
chr7
+
View
Actinidia chinensis
Actinidia32668
Lachesis_group25
+
View
Actinidia chinensis
Actinidia09436
Lachesis_group5
+
View
Actinidia chinensis
Actinidia20403
Lachesis_group18
+
View
Arabidopsis lyrata
AL3G48010
scaffold_3
+
View
Arabidopsis lyrata
AL7G23640
scaffold_7
-
View
Avicennia marina
MSTRG.19571
ScioBoG_25048_HRSCAF_25167
-
View
Amaranthus hybridus
Ah.09g230900
Protein SPEAR3 (SPL-like, EAR-containing protein 3) (TCP interactor containing EAR motif protein 1)
AmaHy_arrow1_Scaffold_9
-
View
Aquilegia oxysepala
Aqoxy7G01525
CHR07
-
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X7P2RE
arahy.Tifrunner.gnm1.Arahy.15
+
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TDG8V6
arahy.Tifrunner.gnm1.Arahy.05
-
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM0XDL
arahy.Tifrunner.gnm1.Arahy.03
-
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R9ZCFD
arahy.Tifrunner.gnm1.Arahy.13
-
View
Arabidopsis thaliana
AT4G28840
mediator of RNA polymerase II transcription subunit unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1)%3B Has 71 Blast hits to 69 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 67%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).
Chr4
+
View
Arabidopsis thaliana
AT2G20080
hypothetical protein unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).
Chr2
-
View
Brassica carinata
BcaB03g16801
ChrB03
-
View
Brassica napus
A03p58450
A03
+
View
Brassica napus
A07p00580
A07
+
View
Brassica napus
A01p09070
A01
-
View
Brassica oleracea
BolC7t40541H
C7
+
View
Brassica rapa
BraA01t00855Z
A01
-
View
Brassica rapa
BraA07t27854Z
A07
+
View
Beta vulgaris
EL10Ac8g18428
Chr8_EL10_PGA_scaffold4
-
View
Camellia sinensis var. sinensis
CSS0008241
PREDICTED: uncharacterized protein LOC100268083 [Vitis vinifera]
Chr6
-
View
Camellia sinensis var. sinensis
CSS0033414
PREDICTED: uncharacterized protein LOC100268083 [Vitis vinifera]
Chr14
-
View
Capsicum annuum
CAN.G1774.6
PGAv.1.6.scaffold1774
-
View
Corylus avellana
Haze_25785
Similar to SPEAR1: Protein SPEAR1 (Arabidopsis thaliana OX%3D3702)
8
+
View
Coffea canephora
Cc06_g10070
Putative unknown protein; FUNCTIONS IN
chr6
+
View
Citrus clementina
Ciclev10010512m.g
scaffold_1
+
View
Cardamine hirsuta
CARHR110580
unknown protein
Chr3
-
View
Cardamine hirsuta
CARHR236630
unknown protein
Chr7
+
View
Carya illinoinensis
CiPaw.03G227900
Chr03
-
View
Citrullus lanatus
ClCG06G008860
Unknown protein
CG_Chr06
+
View
Citrullus lanatus
ClCG11G002330
Unknown protein
CG_Chr11
-
View
Cucumis melo
MELO3C004570.2
Protein SPEAR1
chr05
+
View
Cucumis melo
MELO3C024703.2
Protein SPEAR1
chr02
+
View
Corchorus olitorius
COL.COLO4_34805
hypothetical protein
AWUE01022442.1
-
View
Carica papaya
Cpa.g.sc23.57
supercontig_23
-
View
Chenopodium quinoa
AUR62010940
Protein of unknown function
C_Quinoa_Scaffold_3799
-
View
Capsella rubella
Carub.0007s1180
scaffold_7
-
View
Capsella rubella
Carub.0003s3436
scaffold_3
-
View
Cucumis sativus L.
CsaV3_2G002110
protein SPEAR1
chr2
-
View
Daucus carota
DCAR_012057
hypothetical protein
DCARv2_Chr3
-
View
Davidia involucrata
Dinv41640
GWHABJS00000013
+
View
Durio zibethinus
Duzib187G1156
NW_019167860.1
+
View
Durio zibethinus
Duzib168G0231
NW_019168159.1
-
View
Durio zibethinus
Duzib150G1566
NW_019167882.1
-
View
Erigeron canadensis
ECA234G2378
Conyza_canadensis_scaffold:4
-
View
Eucalyptus grandis
Eucgr.C01280
Chr03
-
View
Erythranthe guttata
Migut.K00491
scaffold_11
-
View
Eutrema salsugineum
Thhalv10026355m.g
scaffold_1
-
View
Eutrema salsugineum
Thhalv10002311m.g
scaffold_12
-
View
Fragaria x ananassa
FAN28G1311
Fvb1-1
-
View
Fragaria x ananassa
FAN26G3023
Fvb1-2
-
View
Fragaria x ananassa
FAN26G0903
Fvb1-2
-
View
Fragaria x ananassa
FAN19G0617
Fvb1-4
-
View
Fragaria x ananassa
FAN23G2152
Fvb1-3
+
View
Fragaria vesca
FvH4_1g05660
Fvb1
+
View
Gossypium hirsutum
Gohir.D06G063400
D06
+
View
Gossypium hirsutum
Gohir.D05G026700
D05
+
View
Gossypium hirsutum
Gohir.A06G064800
A06
+
View
Gossypium hirsutum
Gohir.A07G004600
A07
-
View
Gossypium hirsutum
Gohir.A05G025200
A05
+
View
Gossypium hirsutum
Gohir.D07G007600
D07
+
View
Glycine max
Glyma.01G145600
Gm01
+
View
Glycine max
Glyma.09G193400
Gm09
+
View
Glycine max
Glyma.08G036100
Gm08
-
View
Glycine max
Glyma.05G229100
Gm05
-
View
Gossypium raimondii
Gorai.010G073900
Chr10
+
View
Gossypium raimondii
Gorai.009G026800
Chr09
+
View
Gossypium raimondii
Gorai.001G007300
Chr01
+
View
Hydrangea macrophylla
Hma1.2p1_0945F.1_g240090
Hma1.2p1_0945F.1
+
View
Lupinus albus
Lalb_Chr05g0223051
Lalb_Chr05
+
View
Lupinus albus
Lalb_Chr22g0352641
Lalb_Chr22
-
View
Lotus japonicus
Lj2g0017641
chr2
-
View
Lactuca sativa
Lsat_1_v5_gn_5_147641
Lsat_1_v8_lg_5
-
View
Lactuca sativa
Lsat_1_v5_gn_8_96040
Lsat_1_v8_lg_8
+
View
Magnolia biondii
MBI04_g14930_MAGBIO
AED:0.11
Chr04
+
View
Malus domestica
MD02G1057600
Protein of unknown function
Chr02
+
View
Malus domestica
MD15G1192000
Protein of unknown function
Chr15
+
View
Manihot esculenta
Manes.03G024200
Chromosome03
+
View
Manihot esculenta
Manes.16G112500
Chromosome16
-
View
Medicago truncatula
Medtr8g102890
hypothetical protein
chr8
+
View
Medicago truncatula
Medtr6g088280
hypothetical protein
chr6
+
View
Nelumbo nucifera
Nn2g11654
chr2
-
View
Nelumbo nucifera
Nn3g18137
chr3
+
View
Olea europaea
Oeu002262.2
chr13
+
View
Olea europaea
Oeu018442.1
chr17
-
View
Petunia axillaris
Peaxi162Scf00231g00061
Unknown protein
Peaxi162Scf00231
+
View
Petunia axillaris
Peaxi162Scf00665g00003
Unknown protein
Peaxi162Scf00665
+
View
Punica granatum
PGR142G1369
NC_045128.1
+
View
Punica granatum
PGR102G0050
NC_045129.1
+
View
Prunus persica
Prupe.7G225200
Pp07
-
View
Pisum sativum
Psat1g044920
Unknown gene
chr1LG6
-
View
Populus trichocarpa
Potri.006G161100
Chr06
-
View
Populus trichocarpa
Potri.018G084100
Chr18
+
View
Quercus lobata
QL02p044635
CM012294
-
View
Rosa chinensis
RcHm_v2.0_Chr2g0091291
RcHm_v2.0_Chr2
+
View
Rhododendron simsii
Rhsim05G0043500
chr05
-
View
Salvia bowleyana
SalBow6G0047
GWHASIU00000002
-
View
Salix brachista
Sabra18G0072500
GWHAAZH00000018
+
View
Simmondsia chinensis
Sc08g0007690
GWHAASQ00000008
+
View
Simmondsia chinensis
Sc18g0001380
GWHAASQ00000018
+
View
Sechium edule
Sed0019018
LG11
+
View
Sechium edule
Sed0013314
LG08
-
View
Sechium edule
Sed0028016
LG03
+
View
Solanum lycopersicum
Solyc12g007240.3
hypothetical protein (AHRD V3.3 --* AT2G20080.2)
SL4.0ch12
+
View
Schrenkiella parvula
Sp7g26840
ch7-5
+
View
Schrenkiella parvula
Sp3g33380
ch3-6
-
View
Solanum pennellii
Sopen12g003210
hypothetical protein
Spenn-ch12
+
View
Solanum tuberosum
PGSC0003DMG400000374
Conserved gene of unknown function
ST4.03ch12
-
View
Selenicereus undatus
Hund09225
Scaffold_33676
+
View
Selenicereus undatus
Hund26238
Scaffold_2055
+
View
Trochodendron aralioides
TAR624G1421
group9
-
View
Trochodendron aralioides
TAR636G2793
group1
+
View
Theobroma cacao
Thecc.09G105500
Chromosome_9
-
View
Tarenaya hassleriana
THA.LOC104804017
protein SPEAR1
NW_010971389.1
-
View
Trifolium pratense
TPR.G23503
Tp57577_TGAC_v2_LG3
+
View
Tripterygium wilfordii
TWI32G0193
NC_052254.1
+
View
Tripterygium wilfordii
TWI34G1832
NC_052235.1
-
View
Vigna mungo
VMungo0251G1747
CM024069.1
-
View
Vigna mungo
VMungo0464G0020
CM024077.1
+
View
Vitis vinifera
GSVIVG01015346001
chr11
-
View