Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Os12g0102400 RING-C2 type protein, E3 ligase chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis thaliana AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition%2C domain 1 (InterPro:IPR003954)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1)%3B Has 1342 Blast hits to 828 proteins in 247 species: Archae - 0%3B Bacteria - 318%3B Metazoa - 242%3B Fungi - 228%3B Plants - 152%3B Viruses - 0%3B Other Eukaryotes - 402 (source: NCBI BLink). RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition%2C domain 1 (InterPro:IPR003954)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1). Chr5 + View
Citrus clementina Ciclev10027731m.g scaffold_8 + View
Eutrema salsugineum Thhalv10012563m.g K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) scaffold_2 - View
Vanilla planifolia HPP92_017940 CCR4-NOT transcription complex subunit 4 *** CM028158.1 + View
Zea mays Zm00001eb094340 Zm00001e009304 2 - View
Zea mays Zm00001eb163140 Zm00001e020808 RNA binding (RRM/RBD/RNP motifs) family protein 3 + View