Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.03G040300 Chromosome03 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G14100 LG-1 + View
Acer truncatum Atru.chr7.1701 chr7 - View
Actinidia chinensis Actinidia29931 Lachesis_group25 - View
Actinidia chinensis Actinidia38479 Lachesis_group8 - View
Arabidopsis lyrata AL6G32120 scaffold_6 - View
Arabidopsis lyrata AL3G43580 scaffold_3 + View
Avicennia marina MSTRG.19458 ScioBoG_25048_HRSCAF_25167 + View
Avicennia marina MSTRG.10511 ScioBoG_13798_HRSCAF_13862 - View
Amaranthus hybridus Ah.14g084930 Protein FIP1 (FRIGIDA-interacting protein 1) AmaHy_arrow1_Scaffold_14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UHGN3W PTHR31592//PTHR31592:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 192 arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0T42SY PTHR35710:SF1 - OBP3-RESPONSIVE PROTEIN 4 arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3UYF95 PF14802 - TMEM192 family (TMEM192) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U5UTMI arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT5G20580 TMEM192 family protein BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1)%3B Has 167 Blast hits to 167 proteins in 73 species: Archae - 0%3B Bacteria - 25%3B Metazoa - 58%3B Fungi - 25%3B Plants - 43%3B Viruses - 0%3B Other Eukaryotes - 16 (source: NCBI BLink). BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G06005 FRIGIDA interacting protein 1 Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005%2C FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time. FRIGIDA interacting protein 1 (FIP1)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20580.2)%3B Has 339 Blast hits to 333 proteins in 113 species: Archae - 0%3B Bacteria - 43%3B Metazoa - 135%3B Fungi - 18%3B Plants - 56%3B Viruses - 0%3B Other Eukaryotes - 87 (source: NCBI BLink). FRIGIDA interacting protein 1 (FIP1)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: stem%2C male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20580.2)%3B Has 283 Blast hits to 279 proteins in 95 species: Archae - 0%3B Bacteria - 30%3B Metazoa - 98%3B Fungi - 20%3B Plants - 56%3B Viruses - 0%3B Other Eukaryotes - 79 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0598G258 AmTr_v1.0_scaffold00024 + View
Brassica carinata BcaC06g35950 ChrC06 + View
Brassica carinata BcaB06g26879 ChrB06 + View
Brassica napus C07p09370 C07 - View
Brassica napus C03p11680 C03 - View
Brassica napus A07p06320 A07 - View
Brassica oleracea BolC7t41360H C7 - View
Brassica rapa BraA03t10325Z A03 - View
Brassica rapa BraA07t28424Z A07 - View
Beta vulgaris EL10Ac8g19056 PF14802 - TMEM192 family (TMEM192) Chr8_EL10_PGA_scaffold4 + View
Cannabis sativa CANSAT56G2952 NC_044371.1 + View
Cicer arietinum L. Ca_21321_v3 Ca_LG7_v3 - View
Corylus avellana Haze_26010 Protein of unknown function 8 - View
Coffea canephora Cc06_g12140 OBP3-responsive gene 4 chr6 - View
Citrus clementina Ciclev10009634m.g scaffold_1 - View
Carpinus fangiana Cfa002987 Cfa01 + View
Cardamine hirsuta CARHR103630 FRIGIDA interacting protein 1 Chr3 + View
Cardamine hirsuta CARHR192220 FRIGIDA interacting protein 1 Chr6 + View
Carya illinoinensis CiPaw.04G143000 PF14802 - TMEM192 family (TMEM192) Chr04 + View
Citrullus lanatus ClCG03G015070 Transmembrane protein 192 CG_Chr03 + View
Cucumis melo MELO3C015519.2 OBP3-responsive gene 4 chr02 - View
Corchorus olitorius COL.COLO4_18096 hypothetical protein AWUE01016422.1 + View
Carica papaya Cpa.g.sc28.33 supercontig_28 + View
Chenopodium quinoa AUR62025248 Protein of unknown function C_Quinoa_Scaffold_4329 - View
Chenopodium quinoa AUR62028934 Protein of unknown function C_Quinoa_Scaffold_2412 + View
Capsella rubella Carub.0006s1891 PF14802 - TMEM192 family (TMEM192) scaffold_6 - View
Capsella rubella Carub.0003s2712 PF14802 - TMEM192 family (TMEM192) scaffold_3 + View
Cucumis sativus L. CsaV3_1G041010 OBP3-responsive gene 4 chr1 - View
Daucus carota DCAR_031919 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_028335 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv25560 GWHABJS00000001 - View
Davidia involucrata Dinv42391 GWHABJS00000013 - View
Durio zibethinus Duzib187G0696 NW_019167860.1 - View
Durio zibethinus Duzib168G0796 NW_019168159.1 + View
Erigeron canadensis ECA240G4665 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA236G4601 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.C03328 Chr03 + View
Erythranthe guttata Migut.L01564 scaffold_12 - View
Erythranthe guttata Migut.J00924 scaffold_10 + View
Eutrema salsugineum Thhalv10014003m.g PF14802 - TMEM192 family (TMEM192) scaffold_2 - View
Fragaria x ananassa FAN23G0492 PTHR35710//PTHR35710:SF1 - FAMILY NOT NAMED // OBP3-RESPONSIVE PROTEIN 4 Fvb1-3 - View
Fragaria x ananassa FAN19G2961 PTHR35710//PTHR35710:SF1 - FAMILY NOT NAMED // OBP3-RESPONSIVE PROTEIN 4 Fvb1-4 - View
Fragaria x ananassa FAN28G1803 PF14802 - TMEM192 family (TMEM192) Fvb1-1 + View
Fragaria x ananassa FAN26G1566 PTHR35710//PTHR35710:SF1 - FAMILY NOT NAMED // OBP3-RESPONSIVE PROTEIN 4 Fvb1-2 + View
Fragaria x ananassa FAN26G0120 Fvb1-2 - View
Fragaria vesca FvH4_1g08630 PTHR35710:SF1 - OBP3-RESPONSIVE PROTEIN 4 Fvb1 - View
Gossypium hirsutum Gohir.A06G076400 PTHR35710:SF1 - OBP3-RESPONSIVE PROTEIN 4 A06 - View
Gossypium hirsutum Gohir.A13G190800 PTHR31592//PTHR31592:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 192 A13 + View
Gossypium hirsutum Gohir.D06G075400 PTHR35710:SF1 - OBP3-RESPONSIVE PROTEIN 4 D06 - View
Gossypium hirsutum Gohir.D13G196375 PTHR31592//PTHR31592:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 192 D13 + View
Glycine max Glyma.13G110300 PTHR35710:SF1 - OBP3-RESPONSIVE PROTEIN 4 Gm13 - View
Glycine max Glyma.15G177700 PF14802 - TMEM192 family (TMEM192) Gm15 - View
Glycine max Glyma.17G049400 Gm17 + View
Glycine max Glyma.09G069700 PF14802 - TMEM192 family (TMEM192) Gm09 - View
Gossypium raimondii Gorai.010G088300 Chr10 - View
Gossypium raimondii Gorai.013G224300 Chr13 + View
Helianthus annuus HanXRQChr04g0126011 Probable FRIGIDA interacting protein 1 HanXRQChr04 + View
Hydrangea macrophylla Hma1.2p1_0169F.1_g074510 Hma1.2p1_0169F.1 + View
Lupinus albus Lalb_Chr12g0200131 Lalb_Chr12 - View
Lupinus albus Lalb_Chr23g0276371 PF14802 - TMEM192 family (TMEM192) Lalb_Chr23 + View
Lupinus albus Lalb_Chr07g0181181 PTHR31592//PTHR31592:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 192 Lalb_Chr07 - View
Lotus japonicus Lj6g0009960 PF14802 - TMEM192 family (TMEM192) chr6 + View
Lotus japonicus Lj4g0006964 PTHR35710:SF1 - OBP3-RESPONSIVE PROTEIN 4 chr4 + View
Lonicera japonica Lj7A687T54 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_8_86481 PF14802 - TMEM192 family (TMEM192) Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_7_35121 PTHR35710:SF1 - OBP3-RESPONSIVE PROTEIN 4 Lsat_1_v8_lg_7 + View
Magnolia biondii MBI19_g11823_MAGBIO AED:0.05 Chr19 - View
Magnolia biondii MBI13_g42820_MAGBIO AED:0.28 Chr13 - View
Malus domestica MD15G1217300 OBP3-responsive gene 4 Chr15 - View
Malus domestica MD02G1091100 OBP3-responsive gene 4 Chr02 - View
Medicago truncatula Medtr4g125360 OBP3-responsive protein chr4 + View
Nelumbo nucifera Nn6g35620 chr6 - View
Nelumbo nucifera Nn8g38636 chr8 - View
Nicotiana tabacum Nitab4.5_0000343g0210 Unknown Nitab4.5_0000343 - View
Nicotiana tabacum Nitab4.5_0000073g0180 Unknown Nitab4.5_0000073 - View
Petunia axillaris Peaxi162Scf00928g00035 OBP3-responsive gene 4 isoform 2 Peaxi162Scf00928 - View
Petunia axillaris Peaxi162Scf00127g01814 FRIGIDA interacting protein 1 Peaxi162Scf00127 + View
Punica granatum PGR044G0908 NC_045134.1 - View
Prunus persica Prupe.7G198700 Pp07 + View
Pisum sativum Psat4g017640 Unknown gene chr4LG4 + View
Pisum sativum Psat1g134320 TMEM192 family chr1LG6 - View
Papaver somniferum PSO135G0567 NW_020631041.1 - View
Populus trichocarpa Potri.006G142000 Chr06 + View
Populus trichocarpa Potri.018G065800 Chr18 - View
Phaseolus vulgaris Phvul.003G130900 PTHR35710:SF1 - OBP3-RESPONSIVE PROTEIN 4 Chr03 + View
Phaseolus vulgaris Phvul.009G227200 PF14802 - TMEM192 family (TMEM192) Chr09 + View
Rosa chinensis RcHm_v2.0_Chr2g0094901 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim03G0227400 chr03 + View
Rhododendron simsii Rhsim05G0007700 chr05 + View
Salvia bowleyana SalBow5G2105 GWHASIU00000003 + View
Salvia bowleyana SalBow6G4624 GWHASIU00000002 + View
Salix brachista Sabra06G0111100 GWHAAZH00000006 + View
Salix brachista Sabra18G0052300 GWHAAZH00000018 + View
Simmondsia chinensis Sc18g0002530 GWHAASQ00000018 - View
Sechium edule Sed0014235 LG12 + View
Sechium edule Sed0016579 LG08 - View
Solanum lycopersicum Solyc07g041780.3 OBP3-responsive protein 4 (ORG4) (AHRD V3.3 *** Q8VY85_ARATH) SL4.0ch07 - View
Schrenkiella parvula Sp6g23900 PF14802 - TMEM192 family (TMEM192) ch6-6 + View
Schrenkiella parvula Sp3g24570 PTHR31592//PTHR31592:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 192 ch3-3 + View
Solanum tuberosum PGSC0003DMG400013000 OBP3-responsive gene 4 ST4.03ch07 - View
Selenicereus undatus Hund26035 Scaffold_2055 - View
Trochodendron aralioides TAR626G0579 group3 + View
Trochodendron aralioides TAR383G0969 group10 - View
Theobroma cacao Thecc.09G076700 FRIGIDA interacting protein 1 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104799620 uncharacterized protein LOC104799620 NW_010968505.1 + View
Tarenaya hassleriana THA.LOC104826590 uncharacterized protein LOC104826590 NW_010967707.1 - View
Tarenaya hassleriana THA.LOC104815332 uncharacterized protein LOC104815332 NW_010965625.1 - View
Trifolium pratense TPR.G12576 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI63G1279 NC_052240.1 - View
Tripterygium wilfordii TWI34G0307 NC_052235.1 + View
Vaccinium macrocarpon vmacro06340 Protein of unknown function chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro17199 Protein of unknown function chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0226 CM024072.1 - View
Vigna mungo VMungo1215G3327 CM024074.1 - View
Vitis vinifera GSVIVG01015081001 chr11 + View