Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.10G093801 Chromosome10 - View
Manes.12G122000 Chromosome12 - View
Manes.18G057830 Chromosome18 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G14880 LG-6 - View
Acer truncatum Atru.chr13.954 chr13 - View
Actinidia chinensis Actinidia16388 Lachesis_group25 + View
Actinidia chinensis Actinidia29654 Lachesis_group7 - View
Arabidopsis lyrata AL7G12700 scaffold_7 + View
Avicennia marina MSTRG.20258 ScioBoG_26180_HRSCAF_26306 - View
Amaranthus hybridus Ah.03g134330 AmaHy_arrow1_Scaffold_3 + View
Aquilegia oxysepala Aqoxy6G00651 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B128UN PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1 arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JS19XH arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7GTW3C PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JI0U8K PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G37940 AGAMOUS-like 21 encodes a MADS box protein%2C highly expressed in the root. AGAMOUS-like 21 (AGL21)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C C globular stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1)%3B Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 648%3B Fungi - 305%3B Plants - 6180%3B Viruses - 2%3B Other Eukaryotes - 102 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0800G120 AmTr_v1.0_scaffold00046 - View
Brassica carinata BcaC01g00364 ChrC01 + View
Brassica carinata BcaB06g27809 ChrB06 + View
Brassica carinata BcaB03g12322 ChrB03 + View
Brassica carinata BcaC02g08629 ChrC02 - View
Brassica carinata BcaC07g41042 ChrC07 - View
Brassica napus A04p17050 A04 + View
Brassica napus A09p57360 A09 - View
Brassica napus C03p78900 C03 + View
Brassica napus A01p01110 A01 + View
Brassica napus A08p22960 A08 - View
Brassica napus C01p01250 C01 + View
Brassica oleracea BolC8t51614H C8 - View
Brassica oleracea BolC3t20134H C3 + View
Brassica oleracea BolC1t00122H C1 + View
Brassica rapa BraA01t00109Z A01 + View
Brassica rapa BraA08t34258Z A08 - View
Brassica rapa BraA04t17334Z A04 + View
Beta vulgaris EL10Ac6g13312 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0042518 hypothetical protein CISIN_1g047620mg [Citrus sinensis] Chr3 - View
Camellia sinensis var. sinensis CSS0050311 unnamed protein product [Coffea canephora] Chr9 + View
Camellia sinensis var. sinensis CSS0048771 PREDICTED: MADS-box transcription factor 23-like isoform X2 [Nelumbo nucifera] Chr1 + View
Camellia sinensis var. sinensis CSS0039229 unnamed protein product [Coffea canephora] Chr13 + View
Camellia sinensis var. sinensis CSS0003338 PREDICTED: MADS-box transcription factor 23-like [Vitis vinifera] Chr2 + View
Capsicum annuum CAN.G1061.37 PGAv.1.6.scaffold1061 - View
Capsicum annuum CAN.G215.12 PGAv.1.6.scaffold215 - View
Cicer arietinum L. Ca_25210_v3 Ca_LG8_v3 - View
Cicer arietinum L. Ca_00177_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_22669_v3 Ca_LG7_v3 + View
Corylus avellana Haze_22494 Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702) 3 + View
Corylus avellana Haze_03924 Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc10_g08290 Agamous-like MADS-box protein AGL16 chr10 - View
Coffea canephora Cc02_g20680 Putative MADS-box transcription factor 57 chr2 - View
Citrus clementina Ciclev10027571m.g scaffold_7 - View
Citrus clementina Ciclev10003094m.g scaffold_5 - View
Cardamine hirsuta CARHR246360 AGAMOUS-like MADS-box transcription factor Chr7 - View
Carya illinoinensis CiPaw.07G162300 PTHR11945//PTHR11945:SF147 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Chr07 - View
Carya illinoinensis CiPaw.05G027600 PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1 Chr05 - View
Citrullus lanatus ClCG11G014760 MADS-box transcription factor 57 CG_Chr11 + View
Citrullus lanatus ClCG01G018230 MADS-box transcription factor 25 CG_Chr01 - View
Cucumis melo MELO3C003502.2 MADS-box transcription factor chr04 - View
Cucumis melo MELO3C007700.2 MADS-box transcription factor chr08 - View
Corchorus olitorius COL.COLO4_11687 Transcription factor%2C K-box AWUE01014732.1 - View
Chenopodium quinoa AUR62030928 MADS27: MADS-box transcription factor 27 C_Quinoa_Scaffold_2587 - View
Capsella rubella Carub.0007s0227 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_6G044810 MADS-box transcription factor chr6 - View
Cucumis sativus L. CsaV3_2G030300 MADS-box protein like chr2 - View
Cucumis sativus L. CsaV3_3G048150 MADS-box transcription factor chr3 + View
Daucus carota DCAR_010757 hypothetical protein DCARv2_Chr3 + View
Durio zibethinus Duzib041G0051 NW_019167826.1 - View
Durio zibethinus Duzib116G0482 NW_019167949.1 - View
Durio zibethinus Duzib132G0753 NW_019167915.1 - View
Erigeron canadensis ECA246G4338 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.H02430 Chr08 + View
Eucalyptus grandis Eucgr.F02162 Chr06 - View
Eucalyptus grandis Eucgr.F00448 Chr06 - View
Eucalyptus grandis Eucgr.I02593 Chr09 - View
Erythranthe guttata Migut.N02838 scaffold_14 - View
Erythranthe guttata Migut.H00286 scaffold_8 + View
Erythranthe guttata Migut.B00527 scaffold_2 - View
Eutrema salsugineum Thhalv10026139m.g PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED scaffold_1 + View
Fragaria x ananassa FAN19G0573 PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Fvb1-4 + View
Fragaria x ananassa FAN26G2764 PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Fvb1-2 + View
Fragaria x ananassa FAN27G3369 PTHR11945//PTHR11945:SF146 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Fvb2-1 - View
Fragaria x ananassa FAN28G0449 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Fvb1-1 + View
Fragaria x ananassa FAN23G0326 PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Fvb1-3 + View
Fragaria vesca FvH4_5g34080 PTHR11945//PTHR11945:SF144//PTHR11945:SF184 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED // SUBFAMILY NOT NAMED Fvb5 - View
Gossypium hirsutum Gohir.A11G050000 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED A11 - View
Gossypium hirsutum Gohir.D05G220400 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED D05 - View
Gossypium hirsutum Gohir.A05G217000 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED A05 - View
Gossypium hirsutum Gohir.D11G053400 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED D11 - View
Gossypium hirsutum Gohir.D12G081800 PTHR11945:SF179 - MADS-BOX PROTEIN SVP D12 - View
Gossypium hirsutum Gohir.D06G029700 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED D06 - View
Gossypium hirsutum Gohir.A06G030400 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED A06 - View
Glycine max Glyma.01G020500 PTHR11945//PTHR11945:SF228 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.13G255200 PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1 Gm13 - View
Glycine max Glyma.08G065300 PTHR11945//PTHR11945:SF184 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm08 - View
Gossypium raimondii Gorai.013G053800 Chr13 - View
Gossypium raimondii Gorai.009G227400 Chr09 - View
Gossypium raimondii Gorai.007G058200 Chr07 - View
Lupinus albus Lalb_Chr16g0381531 PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Lalb_Chr16 - View
Lotus japonicus Lj6g0006000 PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1 chr6 - View
Lotus japonicus Lj4g0011636 PTHR11945//PTHR11945:SF172 - MADS BOX PROTEIN // MADS-BOX TRANSCRIPTION FACTOR ANR1 chr4 - View
Lonicera japonica Lj2C430G5 GWHAAZE00000002 - View
Lonicera japonica Lj4A177T25 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_5_111041 PTHR11945//PTHR11945:SF184 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 - View
Magnolia biondii MBI16_g07267_MAGBIO AED:0.53 Chr16 - View
Malus domestica MD15G1389800 AGAMOUS-like 16 Chr15 + View
Malus domestica MD15G1307400 AGAMOUS-like 21 Chr15 - View
Malus domestica MD01G1043900 AGAMOUS-like 21 Chr01 + View
Medicago truncatula Medtr2g009890 MADS-box transcription factor chr2 + View
Medicago truncatula Medtr4g092990 MADS-box transcription factor chr4 - View
Medicago truncatula Medtr5g031000 MADS-box transcription factor chr5 - View
Nelumbo nucifera Nn1g05657 chr1 + View
Nicotiana tabacum Nitab4.5_0000036g0460 Transcription factor, MADS-box, Transcription factor, K-box Nitab4.5_0000036 - View
Olea europaea Oeu012464.1 chr18 - View
Punica granatum PGR031G0386 NC_045127.1 - View
Prunus persica Prupe.1G538700 PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Pp01 + View
Prunus persica Prupe.6G208900 PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Pp06 + View
Pisum sativum Psat1g213000 MADS domain signature chr1LG6 - View
Populus trichocarpa Potri.001G284600 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Chr01 + View
Populus trichocarpa Potri.007G120002 PF00319 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) Chr07 - View
Phaseolus vulgaris Phvul.006G200350 PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1 Chr06 - View
Phaseolus vulgaris Phvul.002G143866 Chr02 - View
Quercus lobata QL11p026079 11 + View
Rhododendron simsii Rhsim06G0069700 chr06 - View
Rhododendron simsii Rhsim08G0088000 chr08 + View
Rhododendron simsii Rhsim10G0080200 chr10 - View
Striga asiatica SGA_v2.0_scaffold149G36511 scaffold149 + View
Salvia bowleyana SalBow2G0914 GWHASIU00000007 + View
Salvia bowleyana SalBow6G6238 GWHASIU00000002 - View
Salix brachista Sabra09G0061000 GWHAAZH00000009 + View
Simmondsia chinensis Sc16g0000710 GWHAASQ00000016 + View
Sechium edule Sed0016651 LG05 - View
Sechium edule Sed0004053 LG10 - View
Solanum lycopersicum Solyc02g091550.2 MADS box transcription factor AGAMOUS (AHRD V3.3 *** A0A1Q1NK16_PAELC) SL4.0ch02 + View
Solanum lycopersicum Solyc01g106170.4 MADS box transcription factor AGAMOUS (AHRD V3.3 *-* A0A1Q1NK16_PAELC) SL4.0ch01 + View
Schrenkiella parvula Sp7g35590 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED ch7-6 - View
Solanum pennellii Sopen04g030400 MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice), MADS box gene, transcription factor | AGAMOUS-like 44 (AGL44) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to nutrient, lateral root development | LOCATED IN: nucleus | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 Spenn-ch04 + View
Solanum pennellii Sopen02g036170 MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice), encodes a MADS box protein, highly expressed in the root. | AGAMOUS-like 21 (AGL21) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400009349 Mads box protein ST4.03ch04 + View
Selenicereus undatus Hund14170 Scaffold_33679 - View
Selenicereus undatus Hund16616 Scaffold_33677 - View
Trochodendron aralioides TAR381G0641 group11 - View
Trochodendron aralioides TAR628G0334 group5 + View
Theobroma cacao Thecc.01G084900 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104798533 MADS-box transcription factor 23-like isoform X1 NW_010960188.1 - View
Trifolium pratense TPR.G37109 Tp57577_TGAC_v2_LG2 - View
Trifolium pratense TPR.G9493 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI56G0284 NC_052242.1 - View
Vaccinium macrocarpon vmacro05524 Similar to MADS27: MADS-box transcription factor 27 (Oryza sativa subsp. japonica OX%3D39947) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G1073 CM024074.1 - View
Vigna mungo VMungo0647G1511 CM024073.1 - View
Vitis vinifera GSVIVG01009219001 chr18 + View
Vitis vinifera GSVIVG01003858001 chrUn - View