Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.08G013100 Chromosome08 - View
Manes.10G052100 Chromosome10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr12.889 chr12 - View
Acer truncatum Atru.chr8.1748 chr8 + View
Actinidia chinensis Actinidia32477 Lachesis_group0 - View
Actinidia chinensis Actinidia31314 Lachesis_group20 + View
Avicennia marina MSTRG.26677 ScioBoG_52287_HRSCAF_52434 + View
Avicennia marina MSTRG.19188 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.5775 ScioBoG_102839_HRSCAF_103093 - View
Amaranthus hybridus Ah.08g211430 AmaHy_arrow1_Scaffold_8 - View
Amaranthus hybridus Ah.15g091420 Ras-related protein RABC2a (AtRABC2a) (Ras-related protein Rab18B) (AtRab18B) AmaHy_arrow1_Scaffold_15 - View
Aquilegia oxysepala Aqoxy1G01097 CHR01 + View
Aquilegia oxysepala Aqoxy2G01651 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A2V3CL K07910 - Ras-related protein Rab-18 (RAB18) arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M8CBSZ K07910 - Ras-related protein Rab-18 (RAB18) arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT3G53610 RAB GTPase homolog 8 GTPase AtRAB8 (atrab8) RAB GTPase homolog 8 (RAB8)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G59840.1)%3B Has 29736 Blast hits to 29676 proteins in 811 species: Archae - 22%3B Bacteria - 184%3B Metazoa - 15446%3B Fungi - 4267%3B Plants - 3567%3B Viruses - 20%3B Other Eukaryotes - 6230 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G03520 RAB GTPase homolog 8C RAB GTPase homolog 8C (RAB8C)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1)%3B Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21%3B Bacteria - 191%3B Metazoa - 15611%3B Fungi - 4242%3B Plants - 3476%3B Viruses - 20%3B Other Eukaryotes - 6210 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC03g12999 ChrC03 - View
Brassica carinata BcaB05g21845 ChrB05 - View
Brassica napus C02p01120 C02 - View
Brassica oleracea BolC2t06102H C2 - View
Brassica rapa BraA02t04765Z A02 - View
Beta vulgaris EL10Ac7g16691 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0001828 hypothetical protein CICLE_v10012751mg [Citrus clementina] Chr10 + View
Camellia sinensis var. sinensis CSS0032981 PREDICTED: ras-related protein RABE1c-like [Nelumbo nucifera] Chr4 - View
Capsicum annuum CAN.G900.7 PGAv.1.6.scaffold900 - View
Cannabis sativa CANSAT80G1155 NC_044372.1 + View
Cicer arietinum L. Ca_08898_v3 Ca_LG3_v3 - View
Corylus avellana Haze_20496 Similar to RABE1C: Ras-related protein RABE1c (Arabidopsis thaliana OX%3D3702) 10 - View
Corylus avellana Haze_19433 Similar to RABC2A: Ras-related protein RABC2a (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g04540 Ras-related protein RABE1a chr6 + View
Citrus clementina Ciclev10013112m.g scaffold_6 + View
Citrus clementina Ciclev10033703m.g scaffold_4 - View
Cardamine hirsuta CARHR209820 Ras-related protein Rab-18-B Chr6 + View
Carya illinoinensis CiPaw.10G001600 K07910 - Ras-related protein Rab-18 (RAB18) Chr10 - View
Carya illinoinensis CiPaw.09G002600 K07910 - Ras-related protein Rab-18 (RAB18) Chr09 - View
Carya illinoinensis CiPaw.01G266100 K07910 - Ras-related protein Rab-18 (RAB18) Chr01 + View
Citrullus lanatus ClCG10G019880 Ras-related protein Rab-18 CG_Chr10 + View
Cucumis melo MELO3C009380.2 ras-related protein RABC2a chr04 + View
Corchorus olitorius COL.COLO4_26910 Small GTPase superfamily AWUE01019397.1 + View
Carica papaya Cpa.g.sc5.161 supercontig_5 + View
Carica papaya Cpa.g.sc92.90 supercontig_92 - View
Carica papaya Cpa.g.sc53.163 supercontig_53 - View
Capsella rubella Carub.0005s2019 PTHR24073//PTHR24073:SF541 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABE1A scaffold_5 - View
Cucumis sativus L. CsaV3_3G036220 Ras-related protein like chr3 - View
Daucus carota DCAR_020805 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv37338 GWHABJS00000021 + View
Davidia involucrata Dinv35814 GWHABJS00000015 - View
Durio zibethinus Duzib093G0411 NW_019167937.1 + View
Durio zibethinus Duzib128G0261 NW_019168481.1 + View
Durio zibethinus Duzib114G0420 NW_019167926.1 - View
Erigeron canadensis ECA233G0894 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA248G3598 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.K02437 Chr11 + View
Eucalyptus grandis Eucgr.A01619 Chr01 - View
Eucalyptus grandis Eucgr.G02743 Chr07 + View
Erythranthe guttata Migut.F01915 scaffold_6 + View
Erythranthe guttata Migut.J00454 scaffold_10 - View
Eutrema salsugineum Thhalv10014465m.g scaffold_2 + View
Fragaria x ananassa FAN05G5485 K07910 - Ras-related protein Rab-18 (RAB18) Fvb6-3 + View
Fragaria x ananassa FAN02G0294 K07910 - Ras-related protein Rab-18 (RAB18) Fvb6-4 - View
Fragaria x ananassa FAN10G0338 PTHR24073//PTHR24073:SF536 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABC2A Fvb7-1 + View
Fragaria x ananassa FAN03G0941 K07910 - Ras-related protein Rab-18 (RAB18) Fvb7-3 - View
Fragaria x ananassa FAN05G2758 K07910 - Ras-related protein Rab-18 (RAB18) Fvb6-3 + View
Fragaria x ananassa FAN09G3296 PTHR24073//PTHR24073:SF536 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABC2A Fvb6-2 - View
Fragaria vesca FvH4_7g18330 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Fvb7 + View
Fragaria vesca FvH4_6g16870 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Fvb6 - View
Gossypium hirsutum Gohir.D11G342500 PTHR24073//PTHR24073:SF536 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABC2A D11 + View
Gossypium hirsutum Gohir.D04G108800 K07910 - Ras-related protein Rab-18 (RAB18) D04 + View
Gossypium hirsutum Gohir.A09G144700 K07910 - Ras-related protein Rab-18 (RAB18) A09 + View
Gossypium hirsutum Gohir.D01G129900 PF00025//PF00071 - ADP-ribosylation factor family (Arf) // Ras family (Ras) D01 + View
Gossypium hirsutum Gohir.A04G070300 K07910 - Ras-related protein Rab-18 (RAB18) A04 + View
Gossypium hirsutum Gohir.D09G140500 K07910 - Ras-related protein Rab-18 (RAB18) D09 + View
Glycine max Glyma.13G146600 PTHR24073//PTHR24073:SF536 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABC2A Gm13 - View
Glycine max Glyma.19G186300 PTHR24073//PTHR24073:SF536 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABC2A Gm19 - View
Glycine max Glyma.03G186200 PTHR24073//PTHR24073:SF536 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABC2A Gm03 - View
Glycine max Glyma.10G059900 PTHR24073//PTHR24073:SF536 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABC2A Gm10 - View
Gossypium raimondii Gorai.007G372500 Chr07 + View
Gossypium raimondii Gorai.009G412800 Chr09 + View
Gossypium raimondii Gorai.006G161100 Chr06 + View
Gossypium raimondii Gorai.002G160900 Chr02 + View
Helianthus annuus HanXRQChr13g0400711 Putative small GTPase superfamily; Ran GTPase; P-loop containing nucleoside triphosphate hydrolase HanXRQChr13 + View
Helianthus annuus HanXRQChr11g0350631 Probable RAB GTPase homolog C2A HanXRQChr11 - View
Hydrangea macrophylla Hma1.2p1_0547F.1_g176520 Hma1.2p1_0547F.1 + View
Lupinus albus Lalb_Chr21g0315101 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Lalb_Chr21 - View
Lupinus albus Lalb_Chr20g0112471 PTHR24073//PTHR24073:SF536 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABC2A Lalb_Chr20 + View
Lupinus albus Lalb_Chr01g0018591 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Lalb_Chr01 + View
Lotus japonicus Lj1g0009033 K07910 - Ras-related protein Rab-18 (RAB18) chr1 + View
Lotus japonicus Lj5g0018304 K07910 - Ras-related protein Rab-18 (RAB18) chr5 + View
Lonicera japonica Lj3C990G10 GWHAAZE00000003 + View
Lonicera japonica Lj2A118G26 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_28421 K07910 - Ras-related protein Rab-18 (RAB18) Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_1_51321 K07910 - Ras-related protein Rab-18 (RAB18) Lsat_1_v8_lg_1 + View
Malus domestica MD01G1099300 RAB GTPase homolog C2A Chr01 - View
Malus domestica MD12G1106600 RAB GTPase homolog C2A Chr12 + View
Malus domestica MD04G1088900 RAB GTPase homolog C2A Chr04 + View
Malus domestica MD07G1166100 RAB GTPase homolog C2A Chr07 - View
Medicago truncatula Medtr1g062760 RAB GTPase-like protein A5B chr1 + View
Medicago truncatula Medtr7g103070 RAB GTPase-like protein C2B chr7 - View
Nelumbo nucifera Nn2g13859 chr2 + View
Nelumbo nucifera Nn6g35219 chr6 + View
Nicotiana tabacum Nitab4.5_0003314g0070 P-loop containing nucleoside triphosphate hydrolase, Small GTPase superfamily, Small GTPase superfamily, Rho type, Small GTPase superfamily, Ras type, Small GTPase superfamily, Rab type Nitab4.5_0003314 + View
Olea europaea Oeu045239.3 chr11 - View
Punica granatum PGR142G0410 NC_045128.1 - View
Punica granatum PGR004G2040 NC_045131.1 - View
Prunus persica Prupe.2G205300 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Pp02 + View
Prunus persica Prupe.7G125400 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Pp07 + View
Pisum sativum Psat3g040440 Ras family chr3LG5 + View
Papaver somniferum PSO063G0416 NC_039364.1 + View
Papaver somniferum PSO339G2286 NC_039366.1 + View
Papaver somniferum PSO339G4549 NC_039366.1 + View
Papaver somniferum PSO801G0303 NW_020628818.1 + View
Populus trichocarpa Potri.006G121400 K07910 - Ras-related protein Rab-18 (RAB18) Chr06 + View
Populus trichocarpa Potri.010G229600 K07910 - Ras-related protein Rab-18 (RAB18) Chr10 - View
Populus trichocarpa Potri.008G032000 K07910 - Ras-related protein Rab-18 (RAB18) Chr08 + View
Populus trichocarpa Potri.016G097800 K07910 - Ras-related protein Rab-18 (RAB18) Chr16 + View
Phaseolus vulgaris Phvul.001G181300 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Chr01 - View
Phaseolus vulgaris Phvul.007G151900 PTHR24073:SF536 - RAS-RELATED PROTEIN RABC2A Chr07 - View
Quercus lobata QL07p042278 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0470891 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim03G0089100 chr03 + View
Salvia bowleyana SalBow3G2043 GWHASIU00000006 + View
Salix brachista Sabra10G0178100 GWHAAZH00000010 - View
Salix brachista Sabra06G0095600 GWHAAZH00000006 + View
Simmondsia chinensis Sc20g0005680 GWHAASQ00000020 - View
Simmondsia chinensis Sc02g0001410 GWHAASQ00000002 - View
Sechium edule Sed0028200 LG02 + View
Sechium edule Sed0023773 LG04 - View
Solanum lycopersicum Solyc09g008460.3 RAB GTPase (AHRD V3.3 *** A0A2U1PC99_ARTAN) SL4.0ch09 - View
Schrenkiella parvula Sp6g39220 K07910 - Ras-related protein Rab-18 (RAB18) ch6-6 + View
Solanum pennellii Sopen09g003290 Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes. | RAB GTPase homolog C2A (RABC2A) | FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction, regulation of transcription, DNA-dependent | LOCATED IN: peroxisome | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Ras , Small GTP-binding protein , Ras GTPase , Ras small GTPase, Rab type , Small GTPase , RNA polymerase sigma factor 54, interaction , Rab18 | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog C2B Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400003898 RAB1X ST4.03ch09 + View
Trochodendron aralioides TAR633G0791 group2 + View
Trochodendron aralioides TAR369G0642 group18 + View
Trochodendron aralioides TAR636G1543 group1 + View
Trochodendron aralioides TAR623G0622 group7 - View
Trochodendron aralioides TAR623G1354 group7 + View
Theobroma cacao Thecc.05G071500 Rab gtpase c2a Chromosome_5 - View
Tarenaya hassleriana THA.LOC104816358 ras-related protein RABE1d-like isoform X4 NW_010965775.1 + View
Tarenaya hassleriana THA.LOC104826921 ras-related protein RABC2a-like NW_010967707.1 - View
Trifolium pratense TPR.G21018 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI74G0223 NC_052234.1 + View
Tripterygium wilfordii TWI53G1800 NC_052244.1 + View
Vaccinium macrocarpon vmacro07319 Similar to RABC2A: Ras-related protein RABC2a (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro08796 Similar to RABC2A: Ras-related protein RABC2a (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G1349 CM024070.1 - View
Vigna mungo VMungo0720G2937 CM024071.1 + View
Vitis vinifera GSVIVG01033681001 chr8 + View
Vitis vinifera GSVIVG01016180001 chr13 - View