Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.16G123300 Chromosome16 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G16010 LG-3 + View
Aethionema arabicum Aa31LG2G17810 LG-2 + View
Acer truncatum Atru.chr7.2454 chr7 + View
Acer truncatum Atru.chr7.1953 chr7 + View
Actinidia chinensis Actinidia15667 Lachesis_group27 - View
Actinidia chinensis Actinidia14595 Lachesis_group14 - View
Actinidia chinensis Actinidia07319 Lachesis_group1 + View
Actinidia chinensis Actinidia21948 Lachesis_group15 + View
Arabidopsis lyrata AL7G19710 scaffold_7 + View
Arabidopsis lyrata AL6G21770 scaffold_6 - View
Avicennia marina MSTRG.26015 ScioBoG_4119_HRSCAF_4138 - View
Amaranthus hybridus Ah.16g104560 Vesicle-associated membrane protein 711 (AtVAMP711) (v-SNARE synaptobrevin 7C) (AtVAMP7C) AmaHy_arrow1_Scaffold_16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H3XS4T PTHR21136//PTHR21136:SF104 - SNARE PROTEINS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.60YECW K08515 - vesicle-associated membrane protein 7 (VAMP7) arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT2G25340 vesicle-associated membrane protein 712 Member of Synaptobrevin-like AtVAMP7C%2C v-SNARE protein family. vesicle-associated membrane protein 712 (VAMP712)%3B INVOLVED IN: transport%2C vesicle-mediated transport%3B LOCATED IN: vacuolar membrane%2C membrane%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%2C LP.08 eight leaves visible%3B CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908)%2C Longin-like (InterPro:IPR011012)%2C Synaptobrevin (InterPro:IPR001388)%3B BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1)%3B Has 2449 Blast hits to 2448 proteins in 267 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 945%3B Fungi - 513%3B Plants - 550%3B Viruses - 3%3B Other Eukaryotes - 438 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G32150 vesicle-associated membrane protein 711 AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C%2C v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups: Qa-%2C Qb-%2C Qc- and R-SNAREs. R-SNAREs are classified into three groups%2C the Sec22-%2C YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex%2C which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain%2C the N-terminal longin-domain (LD)%2C the SNARE motif (SNM) and a transmembrane domain. In spite of the high similarities among the VAMP7 proteins%2C they show different subcellular localizations. VAMP7C is vacuolar-localized and its LD is essential for the correct localization. Generally%2C it is suggested that the complete LD is the determinant of subcellular sorting in both animal and plant R-SNAREs. vesicle-associated membrane protein 711 (VAMP711)%3B INVOLVED IN: intermembrane transport%2C response to salt stress%2C cellular membrane fusion%2C response to abscisic acid stimulus%2C stomatal movement%3B LOCATED IN: vacuolar membrane%2C plasma membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908)%2C Longin-like (InterPro:IPR011012)%2C Synaptobrevin (InterPro:IPR001388)%3B BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1)%3B Has 2432 Blast hits to 2430 proteins in 266 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 955%3B Fungi - 502%3B Plants - 549%3B Viruses - 3%3B Other Eukaryotes - 423 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT5G11150 vesicle-associated membrane protein 713 Member of Synaptobrevin-like AtVAMP7C%2C v-SNARE protein family. vesicle-associated membrane protein 713 (VAMP713)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to salt stress%3B LOCATED IN: vacuolar membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908)%2C Longin-like (InterPro:IPR011012)%2C Synaptobrevin (InterPro:IPR001388)%3B BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 711 (TAIR:AT4G32150.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaNung03141 Contig1063 - View
Brassica carinata BcaC01g01039 ChrC01 + View
Brassica carinata BcaC09g52001 ChrC09 - View
Brassica napus A10p26560 A10 + View
Brassica napus C09p65710 C09 + View
Brassica oleracea BolC1t00676H C1 + View
Brassica oleracea BolC9t59394H C9 + View
Brassica rapa BraA08t33791Z A08 + View
Brassica rapa BraA10t44713Z A10 + View
Beta vulgaris EL10Ac2g04196 K08515 - vesicle-associated membrane protein 7 (VAMP7) Chr2_EL10_PGA_scaffold6 - View
Camellia sinensis var. sinensis CSS0023688 PREDICTED: vesicle-associated membrane protein 711 [Nicotiana tomentosiformis] Chr12 + View
Camellia sinensis var. sinensis CSS0046690 PREDICTED: vesicle-associated membrane protein 711 [Nicotiana tomentosiformis] Chr14 + View
Corylus avellana Haze_21499 Similar to VAMP713: Vesicle-associated membrane protein 713 (Arabidopsis thaliana OX%3D3702) 3 - View
Corylus avellana Haze_25500 Similar to VAMP711: Vesicle-associated membrane protein 711 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc08_g00470 Vesicle-associated membrane protein 713 chr8 - View
Citrus clementina Ciclev10010387m.g scaffold_1 + View
Citrus clementina Ciclev10009428m.g scaffold_1 - View
Carpinus fangiana Cfa013129 Cfa05 - View
Cardamine hirsuta CARHR202150 vesicle-associated membrane protein 713 Chr6 + View
Cardamine hirsuta CARHR116180 vesicle-associated membrane protein 712 Chr4 - View
Carya illinoinensis CiPaw.08G010300 K08515 - vesicle-associated membrane protein 7 (VAMP7) Chr08 - View
Carya illinoinensis CiPaw.04G175200 K08515 - vesicle-associated membrane protein 7 (VAMP7) Chr04 + View
Carya illinoinensis CiPaw.07G224600 K08515 - vesicle-associated membrane protein 7 (VAMP7) Chr07 + View
Citrullus lanatus ClCG06G011560 vesicle-associated membrane protein 712 LENGTH=219 CG_Chr06 + View
Citrullus lanatus ClCG05G016780 Vesicle-associated membrane protein, putative CG_Chr05 - View
Cucumis melo MELO3C003711.2 Vesicle-associated membrane protein chr04 + View
Cucumis melo MELO3C010308.2 vesicle-associated membrane protein 711-like chr02 - View
Carica papaya Cpa.g.sc217.14 supercontig_217 + View
Carica papaya Cpa.g.sc46.45 supercontig_46 + View
Chenopodium quinoa AUR62031537 VAMP711: Vesicle-associated membrane protein 711 C_Quinoa_Scaffold_1206 + View
Chenopodium quinoa AUR62013304 VAMP711: Vesicle-associated membrane protein 711 C_Quinoa_Scaffold_1611 - View
Capsella rubella Carub.0007s0841 K08515 - vesicle-associated membrane protein 7 (VAMP7) scaffold_7 + View
Capsella rubella Carub.0006s0963 K08515 - vesicle-associated membrane protein 7 (VAMP7) scaffold_6 - View
Cucumis sativus L. CsaV3_1G027860 Vesicle-associated membrane protein chr1 + View
Cucumis sativus L. CsaV3_3G046300 Vesicle-associated membrane protein, putative chr3 - View
Daucus carota DCAR_006211 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv36476 GWHABJS00000001 - View
Davidia involucrata Dinv18206 GWHABJS00000003 + View
Davidia involucrata Dinv05000 GWHABJS00000017 - View
Durio zibethinus Duzib187G0901 NW_019167860.1 - View
Durio zibethinus Duzib168G1525 NW_019168159.1 - View
Durio zibethinus Duzib187G1787 NW_019167860.1 + View
Durio zibethinus Duzib150G1668 NW_019167882.1 + View
Erigeron canadensis ECA246G4751 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.C02758 Chr03 - View
Erythranthe guttata Migut.A00029 scaffold_1 + View
Eutrema salsugineum Thhalv10014617m.g K08515 - vesicle-associated membrane protein 7 (VAMP7) scaffold_2 - View
Fragaria x ananassa FAN24G2495 PTHR21136//PTHR21136:SF104 - SNARE PROTEINS // SUBFAMILY NOT NAMED Fvb2-2 + View
Fragaria x ananassa FAN15G0146 K08515 - vesicle-associated membrane protein 7 (VAMP7) Fvb2-4 - View
Fragaria x ananassa FAN27G0111 K08515 - vesicle-associated membrane protein 7 (VAMP7) Fvb2-1 - View
Fragaria x ananassa FAN20G2239 K08515 - vesicle-associated membrane protein 7 (VAMP7) Fvb2-3 - View
Fragaria vesca FvH4_2g28860 PTHR21136//PTHR21136:SF104 - SNARE PROTEINS // SUBFAMILY NOT NAMED Fvb2 - View
Gossypium hirsutum Gohir.A13G181200 K08515 - vesicle-associated membrane protein 7 (VAMP7) A13 - View
Gossypium hirsutum Gohir.A06G053700 PTHR21136//PTHR21136:SF104 - SNARE PROTEINS // SUBFAMILY NOT NAMED A06 - View
Gossypium hirsutum Gohir.A05G014200 K08515 - vesicle-associated membrane protein 7 (VAMP7) A05 - View
Gossypium hirsutum Gohir.A05G055701 PTHR21136//PTHR21136:SF104 - SNARE PROTEINS // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.D05G057800 K08515 - vesicle-associated membrane protein 7 (VAMP7) D05 + View
Gossypium hirsutum Gohir.D07G033200 K08515 - vesicle-associated membrane protein 7 (VAMP7) D07 + View
Gossypium hirsutum Gohir.D05G015300 K08515 - vesicle-associated membrane protein 7 (VAMP7) D05 - View
Gossypium hirsutum Gohir.D13G189000 K08515 - vesicle-associated membrane protein 7 (VAMP7) D13 - View
Gossypium hirsutum Gohir.A07G029200 K08515 - vesicle-associated membrane protein 7 (VAMP7) A07 + View
Gossypium hirsutum Gohir.D06G052800 PTHR21136//PTHR21136:SF104 - SNARE PROTEINS // SUBFAMILY NOT NAMED D06 + View
Glycine max Glyma.17G111000 K08515 - vesicle-associated membrane protein 7 (VAMP7) Gm17 - View
Gossypium raimondii Gorai.013G214400 Chr13 - View
Gossypium raimondii Gorai.009G015400 Chr09 - View
Gossypium raimondii Gorai.001G034800 Chr01 + View
Gossypium raimondii Gorai.009G058900 Chr09 + View
Gossypium raimondii Gorai.010G061200 Chr10 + View
Lonicera japonica Lj7A724T58 GWHAAZE00000007 + View
Lonicera japonica Lj8A721T47 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_1_43440 K08515 - vesicle-associated membrane protein 7 (VAMP7) Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_6_20721 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_5_30141 K08515 - vesicle-associated membrane protein 7 (VAMP7) Lsat_1_v8_lg_5 - View
Malus domestica MD08G1156200 vesicle-associated membrane protein 713 Chr08 + View
Malus domestica MD15G1126900 vesicle-associated membrane protein 713 Chr15 + View
Nicotiana tabacum Nitab4.5_0002042g0020 Synaptobrevin, Longin domain, Longin-like domain Nitab4.5_0002042 - View
Olea europaea Oeu010899.1 scaffold1412 - View
Petunia axillaris Peaxi162Scf00136g00229 vesicle-associated membrane protein 711 Peaxi162Scf00136 - View
Petunia axillaris Peaxi162Scf00643g00112 vesicle-associated membrane protein 713 Peaxi162Scf00643 - View
Punica granatum PGR044G1325 NC_045134.1 + View
Punica granatum PGR142G0780 NC_045128.1 - View
Prunus persica Prupe.1G482600 PTHR21136//PTHR21136:SF104 - SNARE PROTEINS // SUBFAMILY NOT NAMED Pp01 + View
Papaver somniferum PSO170G1764 NC_039360.1 + View
Populus trichocarpa Potri.018G025800 K08515 - vesicle-associated membrane protein 7 (VAMP7) Chr18 - View
Populus trichocarpa Potri.006G256200 K08515 - vesicle-associated membrane protein 7 (VAMP7) Chr06 + View
Populus trichocarpa Potri.018G125900 K08515 - vesicle-associated membrane protein 7 (VAMP7) Chr18 - View
Phaseolus vulgaris Phvul.003G169200 K08515 - vesicle-associated membrane protein 7 (VAMP7) Chr03 + View
Quercus lobata QL02p089940 CM012294 + View
Quercus lobata QL02p021331 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0297631 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim01G0061200 chr01 - View
Striga asiatica SGA_v2.0_scaffold22G09847 scaffold22 - View
Striga asiatica SGA_v2.0_scaffold20G09105 scaffold20 + View
Salvia bowleyana SalBow4G0567 GWHASIU00000008 + View
Salix brachista Sabra06G0200400 GWHAAZH00000006 + View
Salix brachista Sabra18G0106900 GWHAAZH00000018 - View
Salix brachista Sabra18G0028300 GWHAAZH00000018 - View
Simmondsia chinensis Sc18g0000330 GWHAASQ00000018 - View
Simmondsia chinensis Sc09g0010230 GWHAASQ00000009 + View
Sechium edule Sed0025937 LG05 + View
Sechium edule Sed0017679 LG13 - View
Sechium edule Sed0027757 LG08 - View
Solanum lycopersicum Solyc06g065950.4 Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8GUV8_CAPAN) SL4.0ch06 - View
Schrenkiella parvula Sp4g04520 PTHR21136//PTHR21136:SF104 - SNARE PROTEINS // SUBFAMILY NOT NAMED ch4-2 - View
Schrenkiella parvula Sp6g32360 K08515 - vesicle-associated membrane protein 7 (VAMP7) ch6-6 + View
Schrenkiella parvula Sp7g29940 K08515 - vesicle-associated membrane protein 7 (VAMP7) ch7-5 - View
Solanum pennellii Sopen06g024430 AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C, v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups: Qa-, Qb-, Qc- and R-SNAREs. R-SNAREs are classified into three groups, the Sec22-, YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex, which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain, the N-terminal longin-domain (LD), the SNARE motif (SNM) and a transmembrane domain. In spite of the high similarities among the VAMP7 proteins, they show different subcellular localizations. VAMP7C is vacuolar-localized and its LD is essential for the correct localization. Generally, it is suggested that the complete LD is the determinant of subcellular sorting in both animal and plant R-SNAREs. | vesicle-associated membrane protein 711 (VAMP711) | INVOLVED IN: intermembrane transport, response to salt stress, cellular membrane fusion, response to abscisic acid stimulus, stomatal movement | LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Longin , Longin-like , Synaptobrevin | BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400026142 Vesicle-associated membrane protein ST4.03ch06 + View
Selenicereus undatus Hund09286 Scaffold_33676 + View
Selenicereus undatus Hund04501 Scaffold_19641 - View
Trochodendron aralioides TAR383G0387 group10 - View
Trochodendron aralioides TAR625G0015 group4 - View
Trochodendron aralioides TAR636G2697 group1 - View
Theobroma cacao Thecc.09G022600 Vesicle-associated membrane protein 713 Chromosome_9 - View
Theobroma cacao Thecc.09G132800 Vesicle-associated membrane protein 713 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104803650 vesicle-associated membrane protein 711 NW_010971389.1 - View
Tarenaya hassleriana THA.LOC104818614 vesicle-associated membrane protein 711-like NW_010966177.1 - View
Tripterygium wilfordii TWI63G1401 NC_052240.1 + View
Tripterygium wilfordii TWI34G1781 NC_052235.1 - View
Vaccinium macrocarpon vmacro11182 Similar to VAMP711: Vesicle-associated membrane protein 711 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro05167 Similar to VAMP711: Vesicle-associated membrane protein 711 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro07727 Similar to VAMP713: Vesicle-associated membrane protein 713 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01035876001 chr4 + View
Vitis vinifera GSVIVG01015598001 chr11 + View