Gene: Solyc06g065950.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g065950.4
  • Transcript Identifier Solyc06g065950.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 38974697-38977273 : negative

Gene Family Information

  • ID HOM05D000407
  • #Genes/#Species 1240/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g065950.4.1
  • uniprot A0A3Q7HSH2
  • gene_id Solyc06g065950

Descriptions

  • Description Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8GUV8_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0061025
ISO
PLAZA Integrative Orthologymembrane fusion AT4G32150
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G32150
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G32150
GO:0010118
ISO
PLAZA Integrative Orthologystomatal movement AT4G32150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G11150
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G25340
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G32150
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G32150
GO:0030897
ISO
PLAZA Integrative OrthologyHOPS complex AT5G11150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010908 Longin domain
IPR001388 Synaptobrevin
IPR011012 Longin-like domain superfamily
Mapman id Description
22.3.5.1.5.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.R-type SNARE longin components.VAMP7-group component