Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
MSTRG.24048 ScioBoG_3895_HRSCAF_3912 + View
MSTRG.13340 ScioBoG_18778_HRSCAF_18863 - View
MSTRG.23177 ScioBoG_3703_HRSCAF_3719 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G15200 LG-11 - View
Aethionema arabicum Aa31LG5G10790 LG-5 + View
Acer truncatum Atru.chr6.2440 chr6 + View
Actinidia chinensis Actinidia36132 Lachesis_group4 - View
Actinidia chinensis Actinidia18439 Lachesis_group21 - View
Arabidopsis lyrata AL3G10500 scaffold_3 - View
Arabidopsis lyrata AL6G25140 scaffold_6 - View
Amaranthus hybridus Ah.02g130280 E3 ubiquitin-protein ligase RGLG2 (EC 2.3.2.27) (RING domain ligase 2) AmaHy_arrow1_Scaffold_2 + View
Amaranthus hybridus Ah.03g133440 E3 ubiquitin-protein ligase RGLG5 (EC 2.3.2.27) (RING domain ligase 5) AmaHy_arrow1_Scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T6F2TX PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.483GQE PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT5G14420 RING domain ligase2 Encodes RGLG2 (RING domain ligase 2)%2C a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity. RING domain ligase2 (RGLG2)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: N-terminal protein myristoylation%2C cytokinin metabolic process%2C auxin metabolic process%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Copine (InterPro:IPR010734)%2C von Willebrand factor%2C type A (InterPro:IPR002035)%3B BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1)%3B Has 2368 Blast hits to 2301 proteins in 208 species: Archae - 0%3B Bacteria - 31%3B Metazoa - 1318%3B Fungi - 57%3B Plants - 528%3B Viruses - 55%3B Other Eukaryotes - 379 (source: NCBI BLink). RING domain ligase2 (RGLG2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Copine (InterPro:IPR010734)%2C von Willebrand factor%2C type A (InterPro:IPR002035)%3B BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1)%3B Has 2368 Blast hits to 2301 proteins in 208 species: Archae - 0%3B Bacteria - 31%3B Metazoa - 1318%3B Fungi - 57%3B Plants - 528%3B Viruses - 55%3B Other Eukaryotes - 379 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G01650 RING domain ligase1 Encodes RGLG1 (RING domain ligase 1)%2C a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity. RING domain ligase1 (RGLG1)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: N-terminal protein myristoylation%2C cytokinin metabolic process%2C auxin metabolic process%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 28 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Copine (InterPro:IPR010734)%2C von Willebrand factor%2C type A (InterPro:IPR002035)%3B BEST Arabidopsis thaliana protein match is: RING domain ligase2 (TAIR:AT5G14420.2)%3B Has 24426 Blast hits to 13505 proteins in 916 species: Archae - 24%3B Bacteria - 3147%3B Metazoa - 7235%3B Fungi - 3380%3B Plants - 4548%3B Viruses - 743%3B Other Eukaryotes - 5349 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC01g04531 ChrC01 + View
Brassica carinata BcaC03g17467 ChrC03 - View
Brassica carinata BcaC05g30418 ChrC05 + View
Brassica carinata BcaB01g05112 ChrB01 + View
Brassica napus C03p07630 C03 - View
Brassica napus A03p06600 A03 - View
Brassica napus C09p62740 C09 + View
Brassica napus C02p06740 C02 - View
Brassica napus A02p02490 A02 - View
Brassica napus C03p39490 C03 - View
Brassica napus A03p32430 A03 - View
Brassica oleracea BolC2t06619H C2 - View
Brassica oleracea BolC3t13263H C3 - View
Brassica oleracea BolC3t16217H C3 - View
Brassica rapa BraA03t09992Z A03 - View
Brassica rapa BraA02t05219Z A02 - View
Brassica rapa BraA10t44475Z A10 + View
Brassica rapa BraA03t12413Z A03 - View
Camellia sinensis var. sinensis CSS0003362 PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X2 [Nelumbo nucifera] Chr1 - View
Camellia sinensis var. sinensis CSS0016965 RING domain ligase2 isoform 1 [Theobroma cacao] Chr2 - View
Capsicum annuum CAN.G473.33 PGAv.1.6.scaffold473 + View
Cannabis sativa CANSAT64G0184 NC_044379.1 - View
Cicer arietinum L. Ca_04379_v3 Ca_LG2_v3 + View
Corylus avellana Haze_14766 Similar to RGLG2: E3 ubiquitin-protein ligase RGLG2 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc07_g00090 E3 ubiquitin-protein ligase RGLG2 chr7 + View
Citrus clementina Ciclev10015247m.g scaffold_2 + View
Cardamine hirsuta CARHR198890 Copine, putative Chr6 + View
Cardamine hirsuta CARHR075270 Copine, putative Chr3 - View
Carya illinoinensis CiPaw.03G046400 PTHR10857//PTHR10857:SF28 - COPINE // E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Chr03 + View
Citrullus lanatus ClCG09G019410 Copine, putative CG_Chr09 - View
Citrullus lanatus ClCG10G013740 Copine, putative CG_Chr10 - View
Cucumis melo MELO3C021596.2 E3 ubiquitin-protein ligase RGLG2 chr09 - View
Carica papaya Cpa.g.sc130.73 supercontig_130 - View
Capsella rubella Carub.0003s0041 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED scaffold_3 - View
Capsella rubella Carub.0006s1260 scaffold_6 - View
Cucumis sativus L. CsaV3_3G042930 E3 ubiquitin-protein ligase RGLG2 chr3 + View
Cucumis sativus L. CsaV3_5G026990 E3 ubiquitin-protein ligase RGLG2 chr5 + View
Daucus carota DCAR_021738 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_011266 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv25720 GWHABJS00000012 + View
Davidia involucrata Dinv33418 GWHABJS00000014 - View
Durio zibethinus Duzib147G1322 NW_019168470.1 + View
Durio zibethinus Duzib268G0541 NW_019168270.1 + View
Durio zibethinus Duzib264G0677 NW_019167960.1 - View
Durio zibethinus Duzib251G0598 NW_019167971.1 + View
Durio zibethinus Duzib187G1982 NW_019167860.1 - View
Erigeron canadensis ECA238G3176 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA232G0637 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA246G2544 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.J02261 Chr10 + View
Eucalyptus grandis Eucgr.I01722 Chr09 - View
Eucalyptus grandis Eucgr.B03245 Chr02 + View
Erythranthe guttata Migut.K01415 scaffold_11 + View
Erythranthe guttata Migut.E00216 scaffold_5 + View
Eutrema salsugineum Thhalv10020651m.g scaffold_13 + View
Eutrema salsugineum Thhalv10013466m.g PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED scaffold_2 - View
Fragaria x ananassa FAN09G2167 PTHR10857//PTHR10857:SF28 - COPINE // E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Fvb6-2 + View
Fragaria x ananassa FAN14G1855 PTHR10857//PTHR10857:SF28 - COPINE // E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Fvb6-1 - View
Fragaria x ananassa FAN02G3341 PTHR10857//PTHR10857:SF28 - COPINE // E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Fvb6-4 + View
Fragaria x ananassa FAN05G4437 PTHR10857//PTHR10857:SF28 - COPINE // E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Fvb6-3 - View
Gossypium hirsutum Gohir.D07G231600 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED D07 + View
Gossypium hirsutum Gohir.D09G029900 K16280 - E3 ubiquitin-protein ligase RGLG [EC:6.3.2.19] (RGLG) D09 + View
Gossypium hirsutum Gohir.D04G059000 K16280 - E3 ubiquitin-protein ligase RGLG [EC:6.3.2.19] (RGLG) D04 + View
Gossypium hirsutum Gohir.A03G132400 PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN A03 - View
Gossypium hirsutum Gohir.A09G030200 K16280 - E3 ubiquitin-protein ligase RGLG [EC:6.3.2.19] (RGLG) A09 + View
Gossypium hirsutum Gohir.A05G354100 K16280 - E3 ubiquitin-protein ligase RGLG [EC:6.3.2.19] (RGLG) A05 - View
Gossypium hirsutum Gohir.A07G224300 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A07 + View
Glycine max Glyma.18G013100 PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN Gm18 - View
Glycine max Glyma.11G244000 PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN Gm11 + View
Glycine max Glyma.16G068400 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Gm16 - View
Glycine max Glyma.19G078600 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Gm19 - View
Gossypium raimondii Gorai.005G175700 Chr05 - View
Gossypium raimondii Gorai.006G034900 Chr06 + View
Gossypium raimondii Gorai.012G065700 Chr12 + View
Gossypium raimondii Gorai.001G266800 Chr01 + View
Helianthus annuus HanXRQChr14g0451121 Putative von Willebrand factor, type A; Copine HanXRQChr14 - View
Hydrangea macrophylla Hma1.2p1_0279F.1_g111920 Hma1.2p1_0279F.1 + View
Lupinus albus Lalb_Chr02g0158141 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Lalb_Chr02 - View
Lotus japonicus Lj2g0018903 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED chr2 - View
Lonicera japonica Lj7A602G39 GWHAAZE00000007 + View
Lonicera japonica Lju41C44G7 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_2_91101 Lsat_1_v8_lg_2 + View
Malus domestica MD09G1021400 RING domain ligase2 Chr09 - View
Malus domestica MD17G1021400 RING domain ligase2 Chr17 - View
Manihot esculenta Manes.15G152500 Chromosome15 + View
Manihot esculenta Manes.17G110400 Chromosome17 - View
Olea europaea Oeu013967.1 chr11 - View
Olea europaea Oeu050457.2 scaffold567 - View
Olea europaea Oeu048602.1 chr14 - View
Petunia axillaris Peaxi162Scf00420g00133 Copine family protein 2 Peaxi162Scf00420 + View
Punica granatum PGR142G2201 NC_045128.1 + View
Punica granatum PGR083G0790 NC_045133.1 - View
Prunus persica Prupe.3G295000 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Pp03 + View
Pisum sativum Psat1g082360 Copine chr1LG6 + View
Populus trichocarpa Potri.001G342200 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Chr01 - View
Populus trichocarpa Potri.010G049600 PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN Chr10 + View
Phaseolus vulgaris Phvul.004G061800 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Chr04 - View
Phaseolus vulgaris Phvul.001G255900 Chr01 + View
Quercus lobata QL02p073835 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0173441 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0013300 chr10 - View
Rhododendron simsii Rhsim08G0048100 chr08 - View
Striga asiatica SGA_v2.0_scaffold135G34922 scaffold135 + View
Striga asiatica SGA_v2.0_scaffold47G17522 scaffold47 + View
Salvia bowleyana SalBow7G0943 GWHASIU00000005 + View
Salix brachista Sabra16G0221800 GWHAAZH00000016 - View
Simmondsia chinensis Sc03g0007240 GWHAASQ00000003 - View
Sechium edule Sed0003136 LG08 + View
Sechium edule Sed0009295 LG11 + View
Solanum lycopersicum Solyc02g093520.3 E3 ubiquitin-protein ligase RGLG2-like (AHRD V3.3 *** A0A2I4E6G4_9ROSI) SL4.0ch02 + View
Schrenkiella parvula Sp6g29600 PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED ch6-6 + View
Schrenkiella parvula Sp3g00400 PTHR10857//PTHR10857:SF28 - COPINE // E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED ch3-1 - View
Solanum pennellii Sopen02g038140 RING domain ligase2 (RGLG2) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Copine , von Willebrand factor, type A | BEST Arabidopsis thaliana protein match is: RING domain ligase1 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400012613 RING-finger protein ST4.03ch02 + View
Trochodendron aralioides TAR374G1248 group12 + View
Trochodendron aralioides TAR371G1208 group13 + View
Trochodendron aralioides TAR629G2959 group0 - View
Theobroma cacao Thecc.04G021000 RING domain ligase2 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104821098 E3 ubiquitin-protein ligase RGLG2-like NW_010966372.1 + View
Tripterygium wilfordii TWI56G1094 NC_052242.1 + View
Tripterygium wilfordii TWI12G0500 NC_052243.1 - View
Vigna mungo VMungo0464G0726 CM024077.1 - View
Vigna mungo VMungo1383G1258 CM024070.1 + View
Vitis vinifera GSVIVG01032380001 chr14 + View