Gene: Solyc02g093520.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g093520.3
  • Transcript Identifier Solyc02g093520.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 52418350-52421704 : positive

Gene Family Information

  • ID HOM05D000631
  • #Genes/#Species 901/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g093520.3.1
  • uniprot K4BDE8
  • gene_id Solyc02g093520

Descriptions

  • Description E3 ubiquitin-protein ligase RGLG2-like (AHRD V3.3 *** A0A2I4E6G4_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009690
ISO
PLAZA Integrative Orthologycytokinin metabolic process AT5G14420
GO:0070534
ISO
PLAZA Integrative Orthologyprotein K63-linked ubiquitination AT3G01650
GO:0009850
ISO
PLAZA Integrative Orthologyauxin metabolic process AT5G14420
GO:0080148
ISO
PLAZA Integrative Orthologynegative regulation of response to water deprivation AT5G14420
GO:0009789
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathway AT3G01650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G14420
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT3G01650
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G14420

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G14420
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G14420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002035 von Willebrand factor, type A
IPR036465 von Willebrand factor A-like domain superfamily
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR010734 Copine, C-terminal
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase
19.2.2.1.5.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.ligating E3 protein (RGLG)