Home
Dicots PLAZA 5.0
Data
Data
Overview
Query builder
Files
Download
Analyze
Gene Families
Expansion plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/Interpro description
Gene family
Login
Account
Profile settings
Password
Logout
Lj1g0014043
Gene toolbox
View
Sequences
BLAST Hits
Orthologs
Colinear Genes Pairs
Genome Browser
Homology related tools
Local Gene Organization
Multiple Sequence Alignment
Phylogenetic Tree
Similarity Heatmap
Create
Custom Phylogenetic Tree
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism
Gene id
Description
Chromosome
Strand
Multiplicon
Acer truncatum
Atru.chr7.2359
chr7
-
View
Actinidia chinensis
Actinidia15698
Lachesis_group27
+
View
Arabidopsis lyrata
AL4G17070
scaffold_4
+
View
Avicennia marina
MSTRG.11754
ScioBoG_17730_HRSCAF_17811
-
View
Aquilegia oxysepala
Aqoxy7G02003
CHR07
-
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C4YKET
arahy.Tifrunner.gnm1.Arahy.18
-
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8MNE4Q
arahy.Tifrunner.gnm1.Arahy.08
-
View
Arabidopsis thaliana
AT2G25605
DNA-directed RNA polymerase subunit beta unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B Has 75 Blast hits to 75 proteins in 20 species: Archae - 2%3B Bacteria - 4%3B Metazoa - 0%3B Fungi - 0%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 33 (source: NCBI BLink).
Chr2
+
View
Brassica carinata
BcaC02g08337
ChrC02
-
View
Brassica carinata
BcaB06g28079
ChrB06
+
View
Brassica napus
C04p55560
C04
+
View
Brassica napus
A04p19820
A04
+
View
Brassica oleracea
BolC4t27080H
C4
+
View
Brassica rapa
BraA04t17570Z
A04
+
View
Beta vulgaris
EL10Ac2g02569
Chr2_EL10_PGA_scaffold6
+
View
Camellia sinensis var. sinensis
CSS0046405
hypothetical protein PRUPE_ppa015477mg [Prunus persica]
Contig18
-
View
Cicer arietinum L.
Ca_15711_v3
Ca_LG5_v3
-
View
Corylus avellana
Haze_21592
Protein of unknown function
3
+
View
Coffea canephora
Cc11_g01660
unknown protein; FUNCTIONS IN
chr11
-
View
Citrus clementina
Ciclev10009550m.g
scaffold_1
+
View
Ceratophyllum demersum
CDE06G1133
4
+
View
Cardamine hirsuta
CARHR115710
unknown protein
Chr4
-
View
Carya illinoinensis
CiPaw.08G014100
Chr08
+
View
Cucumis melo
MELO3C003678.2
DNA-directed RNA polymerase subunit beta
chr04
-
View
Carica papaya
Cpa.g.sc91.32
supercontig_91
-
View
Capsella rubella
Carub.0004s0533
scaffold_4
+
View
Cucumis sativus L.
CsaV3_3G046600
DNA-directed RNA polymerase subunit beta
chr3
+
View
Durio zibethinus
Duzib150G1343
NW_019167882.1
-
View
Erigeron canadensis
ECA233G0102
Conyza_canadensis_scaffold:1
+
View
Eucalyptus grandis
Eucgr.C01805
Chr03
-
View
Erythranthe guttata
Migut.A00300
scaffold_1
-
View
Fragaria x ananassa
FAN27G2935
Fvb2-1
+
View
Fragaria x ananassa
FAN24G0983
Fvb2-2
-
View
Fragaria x ananassa
FAN15G3188
Fvb2-4
+
View
Fragaria vesca
FvH4_2g29770
Fvb2
+
View
Glycine max
Glyma.04G069700
Gm04
+
View
Glycine max
Glyma.06G071600
Gm06
+
View
Hydrangea macrophylla
Hma1.2p1_0000F.1_g000940
Hma1.2p1_0000F.1
+
View
Lupinus albus
Lalb_Chr23g0268831
Lalb_Chr23
+
View
Lonicera japonica
Lj8A616G46
GWHAAZE00000008
-
View
Lactuca sativa
Lsat_1_v5_gn_6_21681
Lsat_1_v8_lg_6
+
View
Magnolia biondii
MBI04_g00950_MAGBIO
AED:0.06
Chr04
-
View
Malus domestica
MD08G1141900
Protein of unknown function
Chr08
+
View
Medicago truncatula
Medtr3g107860
hypothetical protein
chr3
+
View
Nelumbo nucifera
Nn2g11909
chr2
-
View
Olea europaea
Oeu045191.1
chr8
+
View
Prunus persica
Prupe.1G471900
Pp01
-
View
Pisum sativum
Psat5g027160
Unknown gene
chr5LG3
-
View
Papaver somniferum
PSO170G0157
NC_039360.1
-
View
Populus trichocarpa
Potri.006G249000
Chr06
-
View
Phaseolus vulgaris
Phvul.009G096100
Chr09
+
View
Quercus lobata
QL12p031742
12
-
View
Rosa chinensis
RcHm_v2.0_Chr6g0298791
RcHm_v2.0_Chr6
+
View
Striga asiatica
SGA_v2.0_scaffold448G51771
scaffold448
+
View
Salix brachista
Sabra06G0194800
GWHAAZH00000006
-
View
Sechium edule
Sed0005695
LG13
+
View
Solanum lycopersicum
Solyc08g067430.4
DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** AT2G25605.1)
SL4.0ch08
+
View
Schrenkiella parvula
Sp4g05090
ch4-2
+
View
Solanum pennellii
Sopen08g021360
unknown protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast
Spenn-ch08
+
View
Solanum tuberosum
PGSC0003DMG400007382
Conserved gene of unknown function
ST4.03ch08
+
View
Selenicereus undatus
Hund03010
Scaffold_19641
+
View
Trochodendron aralioides
TAR625G1337
group4
+
View
Theobroma cacao
Thecc.09G147600
DNA-directed RNA polymerase subunit beta'
Chromosome_9
-
View
Tripterygium wilfordii
TWI34G1290
NC_052235.1
+
View
Vaccinium macrocarpon
vmacro05202
Protein of unknown function
chr12_Vaccinium_macrocarpon_Stevens_v1
+
View
Vigna mungo
VMungo1309G2796
CM024072.1
-
View
Vitis vinifera
GSVIVG01035772001
chr4
+
View