Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.6e-111 406.0 194 100.0
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 9.7e-96 353.6 194 88.1
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.3e-95 353.2 194 88.1
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 2.8e-95 352.1 195 85.6
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 1.1e-94 350.1 196 88.3
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.5e-93 346.3 201 84.1
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 3.4e-93 345.1 194 86.1
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.9e-92 342.0 194 83.5
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 6.5e-92 340.9 192 85.4
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 8.5e-92 340.5 197 84.8
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 6.1e-90 334.3 222 76.1
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 7.9e-90 334.0 194 83.0
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.1e-88 330.1 194 83.0
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 2.0e-88 329.3 194 82.5
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.5e-88 328.9 194 82.5
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.3e-88 328.2 194 83.0
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 4.1e-86 321.6 206 80.6
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 6.9e-86 320.9 205 78.5
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 4.5e-85 318.2 203 76.8
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 5.9e-85 317.8 202 77.7
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 1.3e-84 316.6 202 77.2
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 2.2e-84 315.8 199 79.4
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 2.2e-84 315.8 201 77.6
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 2.9e-84 315.5 202 77.2
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 6.5e-84 314.3 203 77.3
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 3.2e-83 312.0 175 82.9
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 4.2e-83 311.6 201 73.1
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 4.2e-83 311.6 211 74.4
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 9.4e-83 310.5 199 77.9
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 9.4e-83 310.5 202 76.2
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 1.2e-82 310.1 194 76.3
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 2.1e-82 309.3 199 76.9
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.7e-82 308.9 195 76.9
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 3.6e-82 308.5 172 84.3
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 3.6e-82 308.5 174 82.8
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 7.9e-82 307.4 175 81.1
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 1.0e-81 307.0 193 73.6
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 1.0e-81 307.0 193 73.6
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 1.0e-81 307.0 193 73.6
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.0e-81 307.0 175 80.6
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 1.4e-81 306.6 203 73.9
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.4e-81 306.6 177 80.8
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.4e-81 306.6 205 74.1
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 2.3e-81 305.8 168 82.1
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 2.3e-81 305.8 168 82.1
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 3.9e-81 305.1 166 83.7
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 6.7e-81 304.3 166 82.5
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 1.1e-80 303.5 197 74.6
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.5e-80 303.1 168 81.0
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.5e-80 303.1 195 75.4
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 2.0e-80 302.8 183 77.0
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 3.3e-80 302.0 166 81.9
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 3.3e-80 302.0 194 76.3
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 7.4e-80 300.8 200 72.5
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 9.7e-80 300.4 184 76.6
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 1.7e-79 299.7 166 80.7
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.1e-78 297.0 194 75.3
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.3e-78 294.7 190 73.7
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 7.0e-78 294.3 204 71.1
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 7.0e-78 294.3 166 81.9
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 9.1e-78 293.9 194 73.7
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 1.2e-77 293.5 194 72.7
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 2.0e-77 292.7 188 76.1
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 2.6e-77 292.4 212 70.3
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 3.5e-77 292.0 199 71.9
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 4.5e-77 291.6 172 77.3
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 4.5e-77 291.6 198 72.7
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.3e-76 290.0 172 77.3
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.7e-76 289.7 198 71.2
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 6.5e-76 287.7 192 72.4
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 6.5e-76 287.7 212 67.9
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 6.5e-76 287.7 174 76.4
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 6.5e-76 287.7 205 69.3
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.5e-75 286.6 195 71.8
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 3.2e-75 285.4 180 73.3
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.2e-74 283.5 210 69.0
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.7e-74 282.3 152 84.9
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 3.6e-74 282.0 195 71.3
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 8.0e-74 280.8 201 70.1
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 6.7e-73 277.7 199 70.9
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 5.3e-70 268.1 162 76.5
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.9e-67 259.6 163 74.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.1e-66 256.1 175 73.7
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 1.0e-65 253.8 140 81.4
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.8e-65 253.1 166 73.5
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 2.3e-65 252.7 179 67.0
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 6.8e-65 251.1 141 80.1
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 6.8e-65 251.1 138 84.1
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.4e-64 248.8 159 75.5
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 6.3e-63 244.6 145 81.4
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 7.0e-62 241.1 179 67.0
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 2.0e-61 239.6 167 67.1
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 3.5e-61 238.8 138 79.7
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 7.5e-56 221.1 161 67.7
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 1.3e-55 220.3 167 62.3
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 2.2e-55 219.5 152 65.1
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 4.9e-55 218.4 152 67.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 4.1e-54 215.3 111 89.2
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 6.4e-47 191.4 164 55.5
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 1.0e-44 184.1 150 62.7
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 3.7e-31 139.0 134 47.8
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 6.9e-17 91.7 164 36.6
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 8.1e-10 68.2 37 78.4
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 3.1e-09 66.2 133 35.3


User provided reference genes

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