Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lalb_Chr10g0103541 PTHR12999:SF16 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B Lalb_Chr10 + View
Lalb_Chr04g0252031 K13098 - RNA-binding protein FUS (TLS, FUS) Lalb_Chr04 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G250 LG-11 - View
Acer truncatum Atru.chr3.4131 chr3 + View
Actinidia chinensis Actinidia23869 Lachesis_group9 + View
Actinidia chinensis Actinidia32621 Lachesis_group24 - View
Actinidia chinensis Actinidia34475 Lachesis_group15 - View
Actinidia chinensis Actinidia23208 Lachesis_group20 - View
Arabidopsis lyrata AL8G34690 scaffold_8 - View
Amaranthus hybridus Ah.08g215230 Transcription initiation factor TFIID subunit 15b (TBP-associated factor 15b) (AtTAF15b) AmaHy_arrow1_Scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S7G6UF PTHR12999//PTHR12999:SF16 - FAMILY NOT NAMED // TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.60GRLQ PTHR12999//PTHR12999:SF16 - FAMILY NOT NAMED // TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT5G58470 TBP-associated factor 15B TBP-associated factor 15B (TAF15b)%3B FUNCTIONS IN: binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C Zinc finger%2C RanBP2-type (InterPro:IPR001876)%3B BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1)%3B Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166%3B Bacteria - 28654%3B Metazoa - 42717%3B Fungi - 9006%3B Plants - 12716%3B Viruses - 1451%3B Other Eukaryotes - 20341 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC03g14089 ChrC03 + View
Brassica carinata BcaB08g36182 ChrB08 - View
Brassica carinata BcaB05g22434 ChrB05 - View
Brassica carinata BcaB01g04519 ChrB01 + View
Brassica napus A02p07680 A02 + View
Brassica napus A03p12200 A03 + View
Brassica napus C02p13300 C02 + View
Brassica napus C09p50360 C09 - View
Brassica napus C03p14280 C03 + View
Brassica oleracea BolC9t57892H C9 - View
Brassica oleracea BolC3t13874H C3 + View
Brassica oleracea BolC2t07445H C2 + View
Brassica rapa BraA10t43645Z A10 - View
Brassica rapa BraA03t10531Z A03 + View
Brassica rapa BraA02t05843Z A02 + View
Beta vulgaris EL10Ac7g15893 K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0025735 PREDICTED: transcription initiation factor TFIID subunit 15b-like isoform X1 [Glycine max] Chr4 - View
Camellia sinensis var. sinensis CSS0015957 unnamed protein product [Vitis vinifera] Chr11 + View
Cicer arietinum L. Ca_14990_v3 Ca_LG5_v3 + View
Corylus avellana Haze_24388 Protein of unknown function 6 + View
Cardamine hirsuta CARHR272300 RNA binding protein, putative Chr8 - View
Carya illinoinensis CiPaw.14G055200 K13098 - RNA-binding protein FUS (TLS, FUS) Chr14 - View
Carya illinoinensis CiPaw.13G071900 K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) Chr13 - View
Carica papaya Cpa.g.sc2.376 supercontig_2 - View
Chenopodium quinoa AUR62009684 TAF15B: Transcription initiation factor TFIID subunit 15b C_Quinoa_Scaffold_2493 - View
Capsella rubella Carub.0008s1906 PTHR12999:SF16 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B scaffold_8 - View
Cucumis sativus L. CsaV3_1G036460 rab3 GTPase-activating protein catalytic subunit chr1 + View
Davidia involucrata Dinv09661 GWHABJS00000007 + View
Davidia involucrata Dinv28678 GWHABJS00000010 + View
Durio zibethinus Duzib170G0382 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019167871.1 + View
Erigeron canadensis ECA247G1661 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA248G0185 Conyza_canadensis_scaffold:9 + View
Erythranthe guttata Migut.N00767 scaffold_14 + View
Eutrema salsugineum Thhalv10012586m.g K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) scaffold_2 + View
Fragaria x ananassa FAN11G3559 K13098 - RNA-binding protein FUS (TLS, FUS) Fvb3-4 - View
Fragaria x ananassa FAN25G3060 K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) Fvb3-1 - View
Fragaria vesca FvH4_3g39400 K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) Fvb3 + View
Gossypium hirsutum Gohir.A05G108332 PTHR12999:SF16 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B A05 + View
Gossypium hirsutum Gohir.A03G026200 K13098 - RNA-binding protein FUS (TLS, FUS) A03 - View
Gossypium hirsutum Gohir.D03G141700 K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) D03 + View
Gossypium hirsutum Gohir.D05G108500 PTHR12999:SF16 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B D05 + View
Glycine max Glyma.11G165000 K13098 - RNA-binding protein FUS (TLS, FUS) Gm11 - View
Glycine max Glyma.14G197700 PTHR12999:SF16 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B Gm14 + View
Glycine max Glyma.02G230600 K13098 - RNA-binding protein FUS (TLS, FUS) Gm02 + View
Gossypium raimondii Gorai.009G112700 Chr09 + View
Gossypium raimondii Gorai.003G148700 Chr03 + View
Lotus japonicus Lj6g0014994 K13098 - RNA-binding protein FUS (TLS, FUS) chr6 - View
Lonicera japonica Lj1C128G5 GWHAAZE00000001 - View
Lonicera japonica Lj2A1091G43 GWHAAZE00000002 + View
Malus domestica MD03G1060300 TBP-associated factor 15 Chr03 - View
Malus domestica MD11G1063400 TBP-associated factor 15B Chr11 - View
Manihot esculenta Manes.02G216300 Chromosome02 - View
Olea europaea Oeu064670.1 chr20 - View
Oryza sativa ssp. japonica Os03g0295700 Conserved hypothetical protein. chr03 + View
Petunia axillaris Peaxi162Scf00390g00821 TBP-associated factor 15B Peaxi162Scf00390 - View
Prunus persica Prupe.6G050700 K13098 - RNA-binding protein FUS (TLS, FUS) Pp06 - View
Papaver somniferum PSO801G0069 NW_020628818.1 - View
Populus trichocarpa Potri.001G280832 PF13890 - Rab3 GTPase-activating protein catalytic subunit (Rab3-GTPase_cat) Chr01 + View
Populus trichocarpa Potri.009G076000 K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) Chr09 + View
Phaseolus vulgaris Phvul.006G072400 K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) Chr06 + View
Phaseolus vulgaris Phvul.008G257600 K13098 - RNA-binding protein FUS (TLS, FUS) Chr08 - View
Quercus lobata QL01p039781 1 + View
Salix brachista Sabra16G0175000 GWHAAZH00000016 + View
Salix brachista Sabra09G0057900 GWHAAZH00000009 + View
Simmondsia chinensis Sc12g0000270 GWHAASQ00000012 + View
Sechium edule Sed0021639 LG01 + View
Solanum lycopersicum Solyc06g082200.4 Rab3 GTPase-activating protein catalytic subunit (AHRD V3.3 *** A0A200PLR8_9MAGN) SL4.0ch06 + View
Schrenkiella parvula Sp6g20160 PTHR12999:SF16 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B ch6-6 - View
Trochodendron aralioides TAR633G1742 group2 + View
Trochodendron aralioides TAR369G0522 group18 - View
Theobroma cacao Thecc.09G354800 Rab3 GTPase-activating protein catalytic subunit Chromosome_9 + View
Tripterygium wilfordii TWI79G0783 NC_052238.1 - View
Tripterygium wilfordii TWI31G1212 NC_052233.1 - View
Vaccinium macrocarpon vmacro02934 Similar to rab3gap1: Rab3 GTPase-activating protein catalytic subunit (Xenopus laevis OX%3D8355) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14615 Similar to TAF15B: Transcription initiation factor TFIID subunit 15b (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G1991 CM024073.1 + View
Vigna mungo VMungo0540G2394 CM024075.1 - View
Vanilla planifolia HPP92_025110 RNA binding protein, putative *-* CM028163.1 + View
Zea mays Zm00001eb396860 Zm00001e038400 9 - View