Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lalb_Chr08g0231161 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lalb_Chr08 - View
Lalb_Chr12g0203731 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lalb_Chr12 + View
Lalb_Chr10g0102251 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lalb_Chr10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.125 chr4 - View
Actinidia chinensis Actinidia30757 Lachesis_group28 - View
Actinidia chinensis Actinidia10308 Lachesis_group26 - View
Arabidopsis lyrata AL8G42630 scaffold_8 + View
Arabidopsis lyrata AL1G50830 scaffold_1 - View
Avicennia marina MSTRG.2559 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.3792 ScioBoG_102836_HRSCAF_103072 - View
Arabidopsis thaliana AT4G39780 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G22200.1)%3B Has 5858 Blast hits to 5712 proteins in 253 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 0%3B Fungi - 0%3B Plants - 5812%3B Viruses - 11%3B Other Eukaryotes - 25 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT1G36060 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.Overexpression results in increased drought tolerance and vitrified leaves. Binds to DRE/GCC promoter elements and activates expression of aquaporin genes AtTIP1%3B1%2C AtTIP2%3B3%2C and AtPIP2%3B2. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: root%2C flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1)%3B Has 6040 Blast hits to 5770 proteins in 261 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 5%3B Fungi - 0%3B Plants - 5982%3B Viruses - 4%3B Other Eukaryotes - 47 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC01g02743 ChrC01 + View
Brassica napus A07p43310 A07 + View
Brassica napus C03p60990 C03 - View
Brassica napus A06p31960 A06 + View
Brassica oleracea BolC3t18361H C3 - View
Brassica oleracea BolC1t00081H C1 - View
Beta vulgaris EL10Ac6g15085 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0008562 unnamed protein product [Coffea canephora] Chr1 - View
Cicer arietinum L. Ca_17727_v3 Ca_LG6_v3 + View
Corylus avellana Haze_24955 Similar to ERF060: Ethylene-responsive transcription factor ERF060 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc07_g15390 Putative Ethylene-responsive transcription factor RAP2-4 chr7 - View
Citrus clementina Ciclev10025961m.g scaffold_7 + View
Ceratophyllum demersum CDE10G0922 8 - View
Carpinus fangiana Cfa002684 Cfa01 - View
Cardamine hirsuta CARHR246930 Ethylene-responsive transcription factor Chr7 + View
Carya illinoinensis CiPaw.03G140400 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr03 + View
Carya illinoinensis CiPaw.04G097700 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr04 + View
Citrullus lanatus ClCG01G018900 Ethylene-responsive transcription factor 5 CG_Chr01 - View
Cucumis melo MELO3C007769.2 ethylene-responsive transcription factor ERF060 chr08 - View
Chenopodium quinoa AUR62002024 ERF060: Ethylene-responsive transcription factor ERF060 C_Quinoa_Scaffold_4480 - View
Chenopodium quinoa AUR62003776 RAP2-4: Ethylene-responsive transcription factor RAP2-4 C_Quinoa_Scaffold_2370 + View
Capsella rubella Carub.0004s0136 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED scaffold_4 - View
Capsella rubella Carub.0007s0168 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_6G045580 ethylene-responsive transcription factor ERF060 chr6 - View
Daucus carota DCAR_014234 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv21925 GWHABJS00000021 - View
Davidia involucrata Dinv13032 GWHABJS00000011 + View
Durio zibethinus Duzib116G0733 NW_019167949.1 - View
Durio zibethinus Duzib147G1624 NW_019168470.1 + View
Durio zibethinus Duzib264G1009 NW_019167960.1 + View
Durio zibethinus Duzib187G0777 NW_019167860.1 + View
Eucalyptus grandis Eucgr.I00422 Chr09 - View
Erythranthe guttata Migut.L00108 scaffold_12 + View
Erythranthe guttata Migut.N02912 scaffold_14 - View
Eutrema salsugineum Thhalv10025958m.g PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10000302m.g PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED scaffold_15 - View
Fragaria x ananassa FAN26G2713 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb1-2 - View
Fragaria x ananassa FAN19G2666 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb1-4 - View
Fragaria x ananassa FAN28G0095 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb1-1 - View
Fragaria x ananassa FAN23G0016 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb1-3 - View
Fragaria vesca FvH4_1g21210 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb1 - View
Gossypium hirsutum Gohir.D11G223000 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED D11 - View
Gossypium hirsutum Gohir.D03G036400 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED D03 + View
Gossypium hirsutum Gohir.A06G037400 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED A06 - View
Gossypium hirsutum Gohir.A02G144200 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED A02 - View
Gossypium hirsutum Gohir.A11G200600 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED A11 + View
Gossypium hirsutum Gohir.D06G038900 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED D06 - View
Glycine max Glyma.08G137600 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm08 - View
Glycine max Glyma.06G105000 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm06 - View
Glycine max Glyma.11G239200 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm11 + View
Glycine max Glyma.18G018200 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm18 - View
Glycine max Glyma.05G179900 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm05 - View
Gossypium raimondii Gorai.007G240700 Chr07 - View
Gossypium raimondii Gorai.003G038200 Chr03 + View
Lotus japonicus Lj4g0018450 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED chr4 + View
Lonicera japonica Lj4P885T10 GWHAAZE00000004 + View
Malus domestica MD15G1365500 related to AP2 4 Chr15 + View
Malus domestica MD15G1326800 Integrase-type DNA-binding superfamily protein Chr15 - View
Manihot esculenta Manes.12G136800 Chromosome12 - View
Manihot esculenta Manes.13G093300 Chromosome13 + View
Manihot esculenta Manes.18G069000 Chromosome18 - View
Medicago truncatula Medtr8g090350 ethylene response factor chr8 - View
Nelumbo nucifera Nn1g05310 chr1 + View
Olea europaea Oeu056591.2 chr18 + View
Olea europaea Oeu024548.2 chr14 - View
Prunus persica Prupe.6G182200 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Pp06 + View
Populus trichocarpa Potri.007G090600 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr07 + View
Populus trichocarpa Potri.005G077300 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr05 - View
Phaseolus vulgaris Phvul.001G251200 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr01 + View
Phaseolus vulgaris Phvul.002G254500 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr02 + View
Quercus lobata QL12p036229 12 + View
Rosa chinensis RcHm_v2.0_Chr2g0115041 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim10G0159000 chr10 + View
Striga asiatica SGA_v2.0_scaffold47G17763 scaffold47 + View
Salvia bowleyana SalBow3G1419 GWHASIU00000006 - View
Salvia bowleyana SalBow5G2182 GWHASIU00000003 + View
Salix brachista Sabra05G0063700 GWHAAZH00000005 - View
Salix brachista Sabra07G0074300 GWHAAZH00000007 + View
Salix brachista Sabra05G0125900 GWHAAZH00000005 - View
Sechium edule Sed0017774 LG10 - View
Sechium edule Sed0020020 LG14 - View
Solanum lycopersicum Solyc04g054910.4 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2ZQC4_CAPAN) SL4.0ch04 + View
Schrenkiella parvula Sp7g36120 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED ch7-6 + View
Schrenkiella parvula Sp4g01260 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED ch4-1 - View
Solanum pennellii Sopen04g024720 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. | Integrase-type DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400009475 Dehydration-responsive element binding protein 3 ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG400008538 Dehydration-responsive element binding protein 3 ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG400020625 AP2/ERF domain-containing transcription factor ST4.03ch04 - View
Trochodendron aralioides TAR376G0265 group14 + View
Trochodendron aralioides TAR628G1355 group5 + View
Trochodendron aralioides TAR381G1046 group11 - View
Theobroma cacao Thecc.01G104200 AP2/ERF domain-containing transcription factor Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807702 ethylene-responsive transcription factor ERF060-like NW_010963495.1 + View
Trifolium pratense TPR.G2163 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI74G1093 NC_052234.1 - View
Tripterygium wilfordii TWI77G0327 NC_052236.1 - View
Vigna mungo VMungo1309G1651 CM024072.1 - View
Vigna mungo VMungo0251G1631 CM024069.1 - View
Vigna mungo VMungo1383G2412 CM024070.1 + View
Zea mays Zm00001eb255160 Zm00001e015869 AP2 domain-containing protein 5 + View
Zea mays Zm00001eb401290 Zm00001e038819 AP2-EREBP transcription factor Ethylene-responsive transcription factor ERF055 9 + View
Zea mays Zm00001eb194220 Zm00001e023870 Putative AP2/EREBP transcription factor superfamily protein Ethylene-responsive transcription factor ERF056 4 - View