Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lalb_Chr23g0268551 PTHR31194//PTHR31194:SF13 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2-RELATED Lalb_Chr23 + View
Lalb_Chr08g0244311 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Lalb_Chr08 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G4420 LG-11 - View
Acer truncatum Atru.chr7.2513 chr7 + View
Actinidia chinensis Actinidia22309 Lachesis_group23 + View
Actinidia chinensis Actinidia23090 Lachesis_group27 - View
Actinidia chinensis Actinidia13205 Lachesis_group18 - View
Actinidia chinensis Actinidia14109 Lachesis_group14 - View
Arabidopsis lyrata AL6G36850 scaffold_6 - View
Avicennia marina MSTRG.9411 ScioBoG_12795_HRSCAF_12848 + View
Avicennia marina MSTRG.4692 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.11171 ScioBoG_14204_HRSCAF_14270 - View
Amaranthus hybridus Ah.10g035640 Ethylene-responsive transcription factor ERF003 AmaHy_arrow1_Scaffold_10 + View
Amaranthus hybridus Ah.16g104870 AmaHy_arrow1_Scaffold_16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JRIM60 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT5G25190 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB07g29940 ChrB07 - View
Brassica carinata BcaC03g17919 ChrC03 + View
Brassica carinata BcaNung03206 Contig1081 - View
Brassica carinata BcaC04g23576 ChrC04 - View
Brassica napus C02p59780 C02 + View
Brassica napus A06p35940 A06 - View
Brassica rapa BraA06t26520Z A06 - View
Beta vulgaris EL10Ac2g04142 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0049793 PREDICTED: ethylene-responsive transcription factor ERF003-like [Nelumbo nucifera] Chr12 - View
Cicer arietinum L. Ca_21677_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_01061_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_15763_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_13050_v3 Ca_LG4_v3 + View
Corylus avellana Haze_21446 Similar to ERF003: Ethylene-responsive transcription factor ERF003 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc08_g00110 Ethylene-responsive transcription factor ERF003 chr8 - View
Citrus clementina Ciclev10026602m.g scaffold_7 - View
Citrus clementina Ciclev10009593m.g scaffold_1 - View
Ceratophyllum demersum CDE05G1877 3 - View
Ceratophyllum demersum CDE02G3621 1 - View
Carya illinoinensis CiPaw.01G252600 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr01 - View
Carya illinoinensis CiPaw.07G227700 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr07 + View
Carya illinoinensis CiPaw.08G007600 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr08 - View
Citrullus lanatus ClCG07G012410 Ethylene-responsive transcription factor 3 CG_Chr07 - View
Citrullus lanatus ClCG08G013610 Ethylene-responsive transcription factor 4 CG_Chr08 + View
Citrullus lanatus ClCG05G016530 Ethylene-responsive transcription factor 8 CG_Chr05 - View
Cucumis melo MELO3C023458.2 ethylene-responsive transcription factor ERF003-like chr01 + View
Cucumis melo MELO3C011287.2 ethylene-responsive transcription factor ERF003-like chr03 - View
Cucumis melo MELO3C016980.2 ethylene-responsive transcription factor ERF003-like chr07 + View
Carica papaya Cpa.g.sc10.113 supercontig_10 + View
Chenopodium quinoa AUR62031580 ERF003: Ethylene-responsive transcription factor ERF003 C_Quinoa_Scaffold_1206 - View
Chenopodium quinoa AUR62012456 ERF003: Ethylene-responsive transcription factor ERF003 C_Quinoa_Scaffold_1995 - View
Capsella rubella Carub.0006s2301 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 scaffold_6 - View
Cucumis sativus L. CsaV3_2G032360 ethylene-responsive transcription factor ERF003-like chr2 + View
Cucumis sativus L. CsaV3_7G031980 ethylene-responsive transcription factor ERF003-like chr7 + View
Cucumis sativus L. CsaV3_4G036780 ethylene-responsive transcription factor ERF003-like chr4 - View
Davidia involucrata Dinv16499 GWHABJS00000017 + View
Durio zibethinus Duzib168G0395 NW_019168159.1 - View
Durio zibethinus Duzib150G0946 NW_019167882.1 - View
Erigeron canadensis ECA233G5553 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.C02719 Chr03 - View
Eutrema salsugineum Thhalv10004973m.g PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 scaffold_6 - View
Fragaria x ananassa FAN15G3406 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Fvb2-4 + View
Fragaria x ananassa FAN09G0452 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Fvb6-2 - View
Fragaria x ananassa FAN27G2670 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Fvb2-1 + View
Fragaria x ananassa FAN02G2604 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Fvb6-4 + View
Fragaria vesca FvH4_2g40810 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Fvb2 + View
Gossypium hirsutum Gohir.A07G030900 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 A07 + View
Gossypium hirsutum Gohir.A05G057500 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 A05 + View
Gossypium hirsutum Gohir.A06G183300 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 A06 + View
Gossypium hirsutum Gohir.D06G190000 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 D06 + View
Gossypium hirsutum Gohir.A05G120600 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 A05 + View
Gossypium hirsutum Gohir.D07G034800 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 D07 + View
Gossypium hirsutum Gohir.D05G059500 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 D05 + View
Glycine max Glyma.04G062900 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm04 - View
Glycine max Glyma.14G111600 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm14 - View
Glycine max Glyma.15G004200 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm15 + View
Glycine max Glyma.17G216100 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm17 + View
Glycine max Glyma.06G064000 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm06 - View
Gossypium raimondii Gorai.009G125100 Chr09 + View
Gossypium raimondii Gorai.001G036500 Chr01 + View
Gossypium raimondii Gorai.009G060600 Chr09 + View
Gossypium raimondii Gorai.010G222900 Chr10 + View
Helianthus annuus HanXRQChr09g0274561 Putative DNA-binding domain; AP2/ERF transcription factor ERF/PTI6 HanXRQChr09 + View
Helianthus annuus HanXRQChr02g0050101 Probable protein PPLZ02 HanXRQChr02 - View
Lotus japonicus Lj3g0013631 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 chr3 - View
Lotus japonicus Lj1g0020772 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 chr1 + View
Lonicera japonica Lj7P729T27 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_6_19600 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_4_85860 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Lsat_1_v8_lg_4 + View
Malus domestica MD15G1036500 Integrase-type DNA-binding superfamily protein Chr15 + View
Malus domestica MD08G1060000 Integrase-type DNA-binding superfamily protein Chr08 - View
Manihot esculenta Manes.06G058200 Chromosome06 + View
Manihot esculenta Manes.03G011000 Chromosome03 - View
Manihot esculenta Manes.16G126900 Chromosome16 + View
Manihot esculenta Manes.04G105000 Chromosome04 + View
Medicago truncatula Medtr3g106290 ethylene response factor chr3 - View
Nelumbo nucifera Nn2g12277 chr2 + View
Petunia axillaris Peaxi162Scf00207g00528 AP/ERF transcription factor [Ipomoea batatas] Peaxi162Scf00207 - View
Punica granatum PGR044G1534 NC_045134.1 + View
Punica granatum PGR102G0750 NC_045129.1 + View
Prunus persica Prupe.1G390800 PF00847 - AP2 domain (AP2) Pp01 + View
Populus trichocarpa Potri.018G021900 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr18 - View
Populus trichocarpa Potri.006G261200 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr06 + View
Populus trichocarpa Potri.003G179900 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr03 - View
Phaseolus vulgaris Phvul.009G089300 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr09 - View
Phaseolus vulgaris Phvul.009G196900 PTHR31194:SF13 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2-RELATED Chr09 + View
Phaseolus vulgaris Phvul.001G046900 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr01 - View
Phaseolus vulgaris Phvul.005G180600 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr05 + View
Quercus lobata QL02p019983 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0133451 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr6g0299771 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim02G0207400 chr02 + View
Rhododendron simsii Rhsim08G0208300 chr08 + View
Rhododendron simsii Rhsim07G0162400 chr07 + View
Striga asiatica SGA_v2.0_scaffold64G21919 scaffold64 - View
Salix brachista Sabra03G0131700 GWHAAZH00000003 - View
Salix brachista Sabra18G0024800 GWHAAZH00000018 - View
Salix brachista Sabra06G0203900 GWHAAZH00000006 + View
Simmondsia chinensis Sc06g0000430 GWHAASQ00000006 + View
Sechium edule Sed0027877 LG03 + View
Sechium edule Sed0007962 LG11 - View
Sechium edule Sed0005507 LG07 - View
Sapria himalayana SHI18487 scaffold28_7511268 - View
Solanum lycopersicum Solyc06g065820.3 Ethylene Response Factor H.1 SL4.0ch06 - View
Solanum lycopersicum Solyc06g068360.3 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2WLG1_CAPBA) SL4.0ch06 - View
Solanum pennellii Sopen06g025620 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. | Integrase-type DNA-binding superfamily protein | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein Spenn-ch06 - View
Solanum pennellii Sopen06g024300 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. | Integrase-type DNA-binding superfamily protein | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400028500 Protein PPLZ02 ST4.03ch06 - View
Trochodendron aralioides TAR626G1863 group3 + View
Theobroma cacao Thecc.09G018400 Integrase-type DNA-binding superfamily protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104799043 ethylene-responsive transcription factor ERF003 NW_010968505.1 - View
Trifolium pratense TPR.G3129 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI34G0020 NC_052235.1 - View
Tripterygium wilfordii TWI32G0238 NC_052254.1 + View
Vaccinium macrocarpon vmacro05146 Similar to ERF003: Ethylene-responsive transcription factor ERF003 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro19038 Similar to ERF003: Ethylene-responsive transcription factor ERF003 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2774 CM024072.1 + View
Vigna mungo VMungo0647G2365 CM024073.1 - View
Vitis vinifera GSVIVG01035911001 chr4 - View